FFCP PHASE1:Hg19::chr19:48753064..48753095,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:48753064..48753095,-
|short_description=p1@CARD8
|description=CAGE_peak_1_at_CARD8_5end
|association_with_transcript=0bp_to_ENST00000357778,ENST0000051859...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22900 | |EntrezGene=22900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17057 | |HGNC=17057 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z7N9,E5RHJ3,E5RHZ3,G3XAM9,E5RIN1 | |UniProt=B7Z7N9,E5RHJ3,E5RHZ3,G3XAM9,E5RIN1 | ||
|association_with_transcript=0bp_to_ENST00000357778,ENST00000518596,ENST00000519302,ENST00000519646,ENST00000520015,ENST00000520153,ENST00000521092,ENST00000522051,ENST00000522773_5end | |||
|cluster_id=chr19:48753064..48753095,- | |||
|coexpression_cluster_id=C560 | |||
|description=CAGE_peak_1_at_CARD8_5end | |||
|id=chr19:48753064..48753095,- | |||
|ontology_enrichment_celltype=CL:0000037!9.66e-57!172;CL:0000566!9.66e-57!172;CL:0002032!4.50e-54!165;CL:0000837!4.50e-54!165;CL:0000988!1.22e-50!182;CL:0000738!4.26e-45!140;CL:0000763!1.80e-44!112;CL:0000049!1.80e-44!112;CL:0002031!6.36e-38!124;CL:0002087!1.12e-36!119;CL:0000766!1.07e-34!76;CL:0000557!1.79e-30!71;CL:0000839!2.31e-29!70;CL:0002009!4.24e-28!65;CL:0002194!1.17e-27!63;CL:0000576!1.17e-27!63;CL:0000040!1.17e-27!63;CL:0000559!1.17e-27!63;CL:0002057!2.29e-25!42;CL:0000860!1.30e-22!45;CL:0002139!2.56e-16!24;CL:0000115!5.24e-16!35;CL:0000071!8.22e-13!18;CL:0002546!8.22e-13!18;CL:0002078!2.08e-09!44;CL:0000542!3.36e-09!53;CL:0000051!3.36e-09!53;CL:0000838!3.50e-09!52;CL:1000413!4.91e-07!9;CL:0000945!6.77e-07!24;CL:0000826!6.77e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.61e-20;33!CL:0002057;6.61e-20;33!CL:0000576;1.30e-19;48!CL:0000473;4.13e-19;39!CL:0000234;4.13e-19;39!CL:0002139;1.46e-17;24!CL:0000766;3.18e-17;69!CL:0000763;3.27e-16;100!CL:0000115;1.87e-15;36!CL:0000071;9.48e-14;18!CL:0002087;5.27e-12;104!CL:0000738;2.06e-11;136!CL:0000988;1.65e-10;177!CL:0002078;7.52e-08;45!CL:1000413;1.68e-07;9!CL:0000945;6.68e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.55e-61,168;CL:0002032,6.59e-59,161;CL:0000837,6.59e-59,161;CL:0000988,1.34e-54,177;CL:0000763,6.79e-50,108;CL:0000049,6.79e-50,108;CL:0000738,1.35e-49,136;CL:0002031,2.25e-42,120;CL:0002087,4.82e-41,115;CL:0000766,8.80e-41,72;CL:0000557,4.73e-36,67;CL:0000839,8.61e-35,66;CL:0002009,1.66e-33,61;CL:0002194,4.49e-33,59;CL:0000576,4.49e-33,59;CL:0000040,4.49e-33,59;CL:0000559,4.49e-33,59;CL:0000473,2.88e-30,48;CL:0000234,2.88e-30,48;CL:0000860,2.41e-27,42;CL:0002057,2.41e-27,42;CL:0000115,4.45e-18,36;CL:0002139,1.53e-17,24;CL:0000071,9.63e-14,18;CL:0002546,9.63e-14,18;CL:0002078,2.28e-11,45;CL:0000542,3.18e-09,53;CL:0000051,3.18e-09,53;CL:0000838,3.37e-09,52;CL:1000413,1.72e-07,9;CL:0002393,5.93e-07,9;CL:0002397,5.93e-07,9;CL:0000945,6.04e-07,24;CL:0000826,6.04e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-19;42!CL:0000049;2.61e-14;108!CL:0002546;9.48e-14;18 | |||
|ontology_enrichment_disease=DOID:8692!1.24e-10!31;DOID:2531!2.33e-10!51;DOID:0060083!2.33e-10!51;DOID:1240!5.08e-10!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.10e-10;31!DOID:1240;9.57e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.54e-10,31;DOID:1240,1.20e-09,39;DOID:2531,4.02e-09,51;DOID:0060083,4.02e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.07e-36!112;UBERON:0002390!1.14e-32!102;UBERON:0003061!1.14e-32!102;UBERON:0002371!1.13e-25!80;UBERON:0002405!1.22e-24!115;UBERON:0001474!3.12e-22!86;UBERON:0007023!1.40e-21!115;UBERON:0003081!9.48e-19!216;UBERON:0004765!5.05e-15!101;UBERON:0001434!5.05e-15!101;UBERON:0001986!8.22e-13!18;UBERON:0004638!8.22e-13!18;UBERON:0004852!8.22e-13!18;UBERON:0000487!1.15e-08!22;UBERON:0003915!4.91e-07!9;UBERON:0004700!4.91e-07!9;UBERON:0001917!4.91e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.48e-14;18!UBERON:0001986;9.48e-14;18!UBERON:0004852;9.48e-14;18!UBERON:0000487;1.29e-09;22!UBERON:0003915;1.68e-07;9!UBERON:0004700;1.68e-07;9!UBERON:0001917;1.68e-07;9!UBERON:0006914;1.75e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.37e-41,108;UBERON:0002390,5.00e-38,98;UBERON:0003061,5.00e-38,98;UBERON:0002405,1.07e-35,93;UBERON:0002371,3.48e-30,76;UBERON:0001474,1.76e-26,82;UBERON:0003081,1.57e-23,203;UBERON:0007023,4.09e-23,114;UBERON:0004765,2.08e-21,90;UBERON:0001434,7.00e-17,100;UBERON:0004638,9.63e-14,18;UBERON:0001986,9.63e-14,18;UBERON:0004852,9.63e-14,18;UBERON:0000487,1.31e-09,22;UBERON:0003915,1.72e-07,9;UBERON:0004700,1.72e-07,9;UBERON:0001917,1.72e-07,9;UBERON:0006914,1.77e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,6.49513948857586,7.63535481884495,8.18592125662264,29.1089564868189,21.4944462934439,13.9334510984468,0,0,0.369754010166788,5.96497444468323,0.142169232487422,39.6360593102044,17.7278530730201,13.0353890855592,10.6335326650767,47.6939960131039,43.7256449125622,48.6817822828613,102.651156578373,75.1973127940731,93.3948635573092,58.3396882633268,38.2386135860298,40.5715345872586,29.9200088015036,31.7639276096085,43.7492125293883,35.8535507966083,27.1103567105207,16.251178391321,73.9792394402436,51.5792623609329,75.5070907735484,55.7072684115043,65.4695215235231,55.6223299445166,47.8284385270738,42.286295415786,41.3438008016713,34.8251086354301,24.397564661719,37.9921571887301,35.4260618012008,26.0741459210101,47.1299793010103,39.350967671169,39.0374294146819,43.3553470794012,118.091705048375,78.8761952870312,71.4935981183562,95.0300219499349,76.4400384563267,95.3102729113685,125.405607246149,114.377089389477,104.8492242609,12.3197371122926,22.3916830617474,16.011166569544,46.5135942597493,46.8463304832135,31.6113841974966,30.4080641481037,22.8972901088487,23.3377317334874,18.2043528704991,12.9972897562578,23.7908391442247,9.52864557068611,18.4368859342554,3.14735632182133,2.35806457649499,7.40165396398233,5.3499678525017,5.21475626613745,3.78758244587787,3.89653456815823,20.2767031531016,5.59751224202191,8.4182879941776,6.22848886659536,4.86747014957566,7.54344215847294,18.2526074110081,17.1337011027226,29.5599147449754,10.0834862950201,7.49114318651197,5.22677619024884,18.4694228597033,14.1791582632711,11.6833331464094,16.1932602892482,7.64556994377832,7.81300144627702,5.70271226669025,15.3586621459328,12.9266477265963,8.74515085866421,8.99753557767264,7.39015197228942,5.84659555351724,2.67440195783507,2.60683926989038,0,2.01210257911091,1.79007586580942,0,0,0,0,0,0,0,0,9.10304574709103,0,0,22.3937701621732,24.3781632218974,26.9904659853296,8.58566247499231,12.0118931263827,8.54352253057999,49.889364249043,41.291260565094,64.2209927974049,76.3165721597413,53.276428398658,66.0283300656162,41.1720084077517,85.2775305258785,85.0281367821237,91.378727284755,44.3112248820062,78.3080268890068,30.9958813086175,84.9301715598957,36.4563876546792,110.10656497427,70.9512817498697,57.8823009684276,58.2603222370356,80.6875810632909,76.028723731119,123.873592389899,85.3116581126316,0,0,0,0,0,0.709336764396714,0,0,0,0.622422070799533,1.34710672069688,1.14423332179421,0,0.576175924479999,0,0,10.8389646093445,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.340296549480063,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,3.85944562915731,0,0,0,0,0,0,0,0,0,0,0,0,38.3840836404817,5.60967095213783,0,0,0,1.96565443335525,8.86184860022106,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,30.4613204775866,30.5570438300563,28.1576145307205,0,0,43.5804100774693,26.9104904910123,26.6049780496824,0,0,0,0,0,0.766765358330422,11.3312544716067,18.6662680108039,25.501358211515,26.3739514753039,25.6272139855551,0.190493682876507,0.381988425558278,0,1.71072446022705,2.05654985406647,5.70651809903443,0,0.448524337381443,0,1.1734125731352,0,0,3.381211010224,0,0,0,0,0.266422179016099,0,0,0,3.58309802723109,0,0,0.301439377059586,0,0,20.6760427090024,27.1218829373348,23.1917333431335,0,0,0,0,0,0,2.91421374383171,5.91092280605782,1.94064817373566,3.33691894327346,0.76228387266739,0,0,0.502548796003046,0,171.522608483905,119.66458368161,270.613330273731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.7708685192595,23.2971336884106,16.2225887861235,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,1.03850885836724,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,14.7853399292166,39.9720207399812,15.9777777915583,12.3381802152231,0,0,0,0,0,2.19259876645935,1.3071772551245,0,0,0,21.1234073877831,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,1.54911749049875,0.845086807596724,0,0,0.35667105148125,0,0,0,0,0,0,0,0,22.0296493817663,0,0,0,0,57.3415798432351,67.288074228529,57.5343659045904,112.921861566992,123.820044198944,75.2229040983552,61.023552407907,57.8981378694817,0,0,0,2.60124445176006,15.581075001456,0.924843963529383,0,52.289795315398,40.7906438381941,176.959115157166,24.9958894011408,40.4347936483381,26.7034574468835,20.9951060335851,45.1142058762121,47.2324060066473,39.022902250199,24.0141651557347,30.6609291137035,64.235499469328,23.6575388517513,28.1831895944444,26.5290135321935,24.228123829853,0.556812347790485,9.84699191581699,47.329743733297,0,49.3454517807473,0,47.1756337255499,0,12.1473288862451,0,0.47748896947538,0,0,5.96488588659779,8.58083440104128,0,18.1284261649436,0.211125408127993,9.16540745954921,16.0244671008066,0,0,5.90807066213134,0,0,0,41.9489343586035,7.89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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,6.49513948857586,7.63535481884495,8.18592125662264,29.1089564868189,21.4944462934439,13.9334510984468,0,0,0.369754010166788,5.96497444468323,0.142169232487422,39.6360593102044,17.7278530730201,13.0353890855592,10.6335326650767,47.6939960131039,43.7256449125622,48.6817822828613,102.651156578373,75.1973127940731,93.3948635573092,58.3396882633268,38.2386135860298,40.5715345872586,29.9200088015036,31.7639276096085,43.7492125293883,35.8535507966083,27.1103567105207,16.251178391321,73.9792394402436,51.5792623609329,75.5070907735484,55.7072684115043,65.4695215235231,55.6223299445166,47.8284385270738,42.286295415786,41.3438008016713,34.8251086354301,24.397564661719,37.9921571887301,35.4260618012008,26.0741459210101,47.1299793010103,39.350967671169,39.0374294146819,43.3553470794012,118.091705048375,78.8761952870312,71.4935981183562,95.0300219499349,76.4400384563267,95.3102729113685,125.405607246149,114.377089389477,104.8492242609,12.3197371122926,22.3916830617474,16.011166569544,46.5135942597493,46.8463304832135,31.6113841974966,30.4080641481037,22.8972901088487,23.3377317334874,18.2043528704991,12.9972897562578,23.7908391442247,9.52864557068611,18.4368859342554,3.14735632182133,2.35806457649499,7.40165396398233,5.3499678525017,5.21475626613745,3.78758244587787,3.89653456815823,20.2767031531016,5.59751224202191,8.4182879941776,6.22848886659536,4.86747014957566,7.54344215847294,18.2526074110081,17.1337011027226,29.5599147449754,10.0834862950201,7.49114318651197,5.22677619024884,18.4694228597033,14.1791582632711,11.6833331464094,16.1932602892482,7.64556994377832,7.81300144627702,5.70271226669025,15.3586621459328,12.9266477265963,8.74515085866421,8.99753557767264,7.39015197228942,5.84659555351724,2.67440195783507,2.60683926989038,0,2.01210257911091,1.79007586580942,0,0,0,0,0,0,0,0,9.10304574709103,0,0,22.3937701621732,24.3781632218974,26.9904659853296,8.58566247499231,12.0118931263827,8.54352253057999,49.889364249043,41.291260565094,64.2209927974049,76.3165721597413,53.276428398658,66.0283300656162,41.1720084077517,85.2775305258785,85.0281367821237,91.378727284755,44.3112248820062,78.3080268890068,30.9958813086175,84.9301715598957,36.4563876546792,110.10656497427,70.9512817498697,57.8823009684276,58.2603222370356,80.6875810632909,76.028723731119,123.873592389899,85.3116581126316,0,0,0,0,0,0.709336764396714,0,0,0,0.622422070799533,1.34710672069688,1.14423332179421,0,0.576175924479999,0,0,10.8389646093445,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.340296549480063,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,3.85944562915731,0,0,0,0,0,0,0,0,0,0,0,0,38.3840836404817,5.60967095213783,0,0,0,1.96565443335525,8.86184860022106,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,30.4613204775866,30.5570438300563,28.1576145307205,0,0,43.5804100774693,26.9104904910123,26.6049780496824,0,0,0,0,0,0.766765358330422,11.3312544716067,18.6662680108039,25.501358211515,26.3739514753039,25.6272139855551,0.190493682876507,0.381988425558278,0,1.71072446022705,2.05654985406647,5.70651809903443,0,0.448524337381443,0,1.1734125731352,0,0,3.381211010224,0,0,0,0,0.266422179016099,0,0,0,3.58309802723109,0,0,0.301439377059586,0,0,20.6760427090024,27.1218829373348,23.1917333431335,0,0,0,0,0,0,2.91421374383171,5.91092280605782,1.94064817373566,3.33691894327346,0.76228387266739,0,0,0.502548796003046,0,171.522608483905,119.66458368161,270.613330273731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.7708685192595,23.2971336884106,16.2225887861235,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,1.03850885836724,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,14.7853399292166,39.9720207399812,15.9777777915583,12.3381802152231,0,0,0,0,0,2.19259876645935,1.3071772551245,0,0,0,21.1234073877831,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0.924100740528266,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,1.54911749049875,0.845086807596724,0,0,0.35667105148125,0,0,0,0,0,0,0,0,22.0296493817663,0,0,0,0,57.3415798432351,67.288074228529,57.5343659045904,112.921861566992,123.820044198944,75.2229040983552,61.023552407907,57.8981378694817,0,0,0,2.60124445176006,15.581075001456,0.924843963529383,0,52.289795315398,40.7906438381941,176.959115157166,24.9958894011408,40.4347936483381,26.7034574468835,20.9951060335851,45.1142058762121,47.2324060066473,39.022902250199,24.0141651557347,30.6609291137035,64.235499469328,23.6575388517513,28.1831895944444,26.5290135321935,24.228123829853,0.556812347790485,9.84699191581699,47.329743733297,0,49.3454517807473,0,47.1756337255499,0,12.1473288862451,0,0.47748896947538,0,0,5.96488588659779,8.58083440104128,0,18.1284261649436,0.211125408127993,9.16540745954921,16.0244671008066,0,0,5.90807066213134,0,0,0,41.9489343586035,7.89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| ||
|short_description=p1@CARD8 | |||
}} | }} |
Latest revision as of 01:38, 19 September 2015
Short description: | p1@CARD8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CARD8_5end |
Coexpression cluster: | C560_Neutrophils_Eosinophils_CD14CD16_Whole_CD14_acute_Dendritic |
Association with transcript: | 0bp_to_ENST00000357778, ENST00000518596, ENST00000519302, ENST00000519646, ENST00000520015, ENST00000520153, ENST00000521092, ENST00000522051, ENST00000522773_5end |
EntrezGene: | CARD8 |
HGNC: | 17057 |
UniProt: | B7Z7N9E5RHJ3E5RHZ3G3XAM9E5RIN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.37e-41 | 108 |
hematopoietic system | 5.00e-38 | 98 |
blood island | 5.00e-38 | 98 |
immune system | 1.07e-35 | 93 |
bone marrow | 3.48e-30 | 76 |
bone element | 1.76e-26 | 82 |
lateral plate mesoderm | 1.57e-23 | 203 |
adult organism | 4.09e-23 | 114 |
skeletal element | 2.08e-21 | 90 |
skeletal system | 7.00e-17 | 100 |
blood vessel endothelium | 9.63e-14 | 18 |
endothelium | 9.63e-14 | 18 |
cardiovascular system endothelium | 9.63e-14 | 18 |
simple squamous epithelium | 1.31e-09 | 22 |
endothelial tube | 1.72e-07 | 9 |
arterial system endothelium | 1.72e-07 | 9 |
endothelium of artery | 1.72e-07 | 9 |
squamous epithelium | 1.77e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.54e-10 | 31 |
leukemia | 1.20e-09 | 39 |
hematologic cancer | 4.02e-09 | 51 |
immune system cancer | 4.02e-09 | 51 |