FFCP PHASE1:Hg19::chr19:49588690..49588720,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6625 | |EntrezGene=6625 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11150 | |HGNC=11150 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000401730_5end | |association_with_transcript=0bp_to_ENST00000401730_5end | ||
|cluster_id=chr19:49588690..49588720,+ | |||
|description=CAGE_peak_1_at_SNRNP70_5end | |description=CAGE_peak_1_at_SNRNP70_5end | ||
|id=chr19:49588690..49588720,+ | |id=chr19:49588690..49588720,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.47e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.66e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.47e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001049!5.13e-15!57;UBERON:0005068!5.13e-15!57;UBERON:0006241!5.13e-15!57;UBERON:0007135!5.13e-15!57;UBERON:0003075!5.98e-13!86;UBERON:0007284!5.98e-13!86;UBERON:0002346!7.04e-13!90;UBERON:0002616!6.28e-11!59;UBERON:0002780!7.23e-10!41;UBERON:0001890!7.23e-10!41;UBERON:0006240!7.23e-10!41;UBERON:0003080!7.44e-10!42;UBERON:0000955!4.19e-09!69;UBERON:0006238!4.19e-09!69;UBERON:0003056!4.97e-09!61;UBERON:0001017!5.98e-09!82;UBERON:0002020!1.01e-08!34;UBERON:0003528!1.01e-08!34;UBERON:0007023!1.20e-08!115;UBERON:0005743!1.60e-08!86;UBERON:0002791!3.29e-08!33;UBERON:0001893!8.49e-08!34;UBERON:0000073!8.62e-08!94;UBERON:0001016!8.62e-08!94;UBERON:0001869!4.89e-07!32;UBERON:0003076!9.59e-07!15;UBERON:0003057!9.59e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;2.40e-08;53!UBERON:0002616;2.40e-08;53!UBERON:0002780;9.27e-08;41!UBERON:0001890;9.27e-08;41!UBERON:0003528;2.65e-07;34!UBERON:0002020;2.65e-07;34!UBERON:0002791;4.06e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.82e-15,56;UBERON:0005068,4.82e-15,56;UBERON:0006241,4.82e-15,56;UBERON:0007135,4.82e-15,56;UBERON:0003075,6.34e-14,82;UBERON:0007284,6.34e-14,82;UBERON:0002346,8.18e-14,86;UBERON:0000073,1.09e-13,53;UBERON:0002616,1.09e-13,53;UBERON:0010371,2.08e-10,104;UBERON:0002780,7.23e-10,41;UBERON:0001890,7.23e-10,41;UBERON:0003080,7.23e-10,41;UBERON:0006240,7.23e-10,41;UBERON:0003056,1.78e-09,61;UBERON:0000955,4.52e-09,68;UBERON:0006238,4.52e-09,68;UBERON:0001017,6.55e-09,81;UBERON:0003528,1.01e-08,34;UBERON:0002020,1.01e-08,34;UBERON:0007023,2.54e-08,114;UBERON:0001016,4.20e-08,89;UBERON:0002791,6.56e-08,32;UBERON:0001893,8.49e-08,34;UBERON:0001869,4.89e-07,32;UBERON:0000025,9.23e-07,192;UBERON:0003076,9.59e-07,15;UBERON:0003057,9.59e-07,15 | |||
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| ||
|short_description=p1@SNRNP70 | |short_description=p1@SNRNP70 | ||
}} | }} |
Latest revision as of 06:08, 19 September 2015
Short description: | p1@SNRNP70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SNRNP70_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000401730_5end |
EntrezGene: | SNRNP70 |
HGNC: | 11150 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 4.82e-15 | 56 |
neural rod | 4.82e-15 | 56 |
future spinal cord | 4.82e-15 | 56 |
neural keel | 4.82e-15 | 56 |
neural plate | 6.34e-14 | 82 |
presumptive neural plate | 6.34e-14 | 82 |
neurectoderm | 8.18e-14 | 86 |
regional part of nervous system | 1.09e-13 | 53 |
regional part of brain | 1.09e-13 | 53 |
ecto-epithelium | 2.08e-10 | 104 |
regional part of forebrain | 7.23e-10 | 41 |
forebrain | 7.23e-10 | 41 |
anterior neural tube | 7.23e-10 | 41 |
future forebrain | 7.23e-10 | 41 |
pre-chordal neural plate | 1.78e-09 | 61 |
brain | 4.52e-09 | 68 |
future brain | 4.52e-09 | 68 |
central nervous system | 6.55e-09 | 81 |
brain grey matter | 1.01e-08 | 34 |
gray matter | 1.01e-08 | 34 |
adult organism | 2.54e-08 | 114 |
nervous system | 4.20e-08 | 89 |
regional part of telencephalon | 6.56e-08 | 32 |
telencephalon | 8.49e-08 | 34 |
cerebral hemisphere | 4.89e-07 | 32 |
tube | 9.23e-07 | 192 |
posterior neural tube | 9.59e-07 | 15 |
chordal neural plate | 9.59e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.47e-07 | 31 |