FFCP PHASE1:Hg19::chrX:123094709..123094729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10735 | |EntrezGene=10735 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11355 | |HGNC=11355 | ||
|TSSclassifier=strong | |||
|UniProt=B1AMS8 | |UniProt=B1AMS8 | ||
|association_with_transcript=0bp_to_ENST00000458700_5end | |association_with_transcript=0bp_to_ENST00000458700_5end | ||
|cluster_id=chrX:123094709..123094729,+ | |||
|description=CAGE_peak_9_at_STAG2_5end | |description=CAGE_peak_9_at_STAG2_5end | ||
|id=chrX:123094709..123094729,+ | |id=chrX:123094709..123094729,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.40e-10!57;UBERON:0005068!9.40e-10!57;UBERON:0006241!9.40e-10!57;UBERON:0007135!9.40e-10!57;UBERON:0002780!3.96e-09!41;UBERON:0001890!3.96e-09!41;UBERON:0006240!3.96e-09!41;UBERON:0002020!1.18e-08!34;UBERON:0003528!1.18e-08!34;UBERON:0001017!1.90e-08!82;UBERON:0003080!2.07e-08!42;UBERON:0002616!2.49e-08!59;UBERON:0005743!8.87e-08!86;UBERON:0002791!1.09e-07!33;UBERON:0001893!1.11e-07!34;UBERON:0000955!1.39e-07!69;UBERON:0006238!1.39e-07!69;UBERON:0001869!1.75e-07!32;UBERON:0007023!8.06e-07!115 | |ontology_enrichment_uberon=UBERON:0001049!9.40e-10!57;UBERON:0005068!9.40e-10!57;UBERON:0006241!9.40e-10!57;UBERON:0007135!9.40e-10!57;UBERON:0002780!3.96e-09!41;UBERON:0001890!3.96e-09!41;UBERON:0006240!3.96e-09!41;UBERON:0002020!1.18e-08!34;UBERON:0003528!1.18e-08!34;UBERON:0001017!1.90e-08!82;UBERON:0003080!2.07e-08!42;UBERON:0002616!2.49e-08!59;UBERON:0005743!8.87e-08!86;UBERON:0002791!1.09e-07!33;UBERON:0001893!1.11e-07!34;UBERON:0000955!1.39e-07!69;UBERON:0006238!1.39e-07!69;UBERON:0001869!1.75e-07!32;UBERON:0007023!8.06e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0003528;7.13e-07;34!UBERON:0002020;7.13e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0003528;7.13e-07;34!UBERON:0002020;7.13e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.12e-10,56;UBERON:0005068,1.12e-10,56;UBERON:0006241,1.12e-10,56;UBERON:0007135,1.12e-10,56;UBERON:0000073,5.41e-10,53;UBERON:0002616,5.41e-10,53;UBERON:0002780,1.23e-08,41;UBERON:0001890,1.23e-08,41;UBERON:0003080,1.23e-08,41;UBERON:0006240,1.23e-08,41;UBERON:0003528,1.33e-08,34;UBERON:0002020,1.33e-08,34;UBERON:0001017,4.78e-08,81;UBERON:0000955,6.98e-08,68;UBERON:0006238,6.98e-08,68;UBERON:0002791,1.51e-07,32;UBERON:0001869,3.00e-07,32;UBERON:0001893,4.29e-07,34;UBERON:0003075,8.75e-07,82;UBERON:0007284,8.75e-07,82 | |||
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| ||
|short_description=p9@STAG2 | |short_description=p9@STAG2 | ||
}} | }} |
Latest revision as of 07:49, 19 September 2015
Short description: | p9@STAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_STAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000458700_5end |
EntrezGene: | STAG2 |
HGNC: | 11355 |
UniProt: | B1AMS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.12e-10 | 56 |
neural rod | 1.12e-10 | 56 |
future spinal cord | 1.12e-10 | 56 |
neural keel | 1.12e-10 | 56 |
regional part of nervous system | 5.41e-10 | 53 |
regional part of brain | 5.41e-10 | 53 |
regional part of forebrain | 1.23e-08 | 41 |
forebrain | 1.23e-08 | 41 |
anterior neural tube | 1.23e-08 | 41 |
future forebrain | 1.23e-08 | 41 |
brain grey matter | 1.33e-08 | 34 |
gray matter | 1.33e-08 | 34 |
central nervous system | 4.78e-08 | 81 |
brain | 6.98e-08 | 68 |
future brain | 6.98e-08 | 68 |
regional part of telencephalon | 1.51e-07 | 32 |
cerebral hemisphere | 3.00e-07 | 32 |
telencephalon | 4.29e-07 | 34 |
neural plate | 8.75e-07 | 82 |
presumptive neural plate | 8.75e-07 | 82 |