FFCP PHASE1:Hg19::chr5:95997885..95997914,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=831 | |EntrezGene=831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1515 | |HGNC=1515 | ||
|TSSclassifier=strong | |||
|UniProt=F8W7E0,P20810,Q86YM9 | |UniProt=F8W7E0,P20810,Q86YM9 | ||
|association_with_transcript=0bp_to_ENST00000511097,NM_001042440_5end | |association_with_transcript=0bp_to_ENST00000511097,NM_001042440_5end | ||
|cluster_id=chr5:95997885..95997914,+ | |||
|description=CAGE_peak_10_at_CAST_5end | |description=CAGE_peak_10_at_CAST_5end | ||
|id=chr5:95997885..95997914,+ | |id=chr5:95997885..95997914,+ | ||
|ontology_enrichment_celltype=CL:0000839!9.11e-13!70;CL:0000557!1.14e-12!71;CL:0002194!3.02e-12!63;CL:0000576!3.02e-12!63;CL:0000040!3.02e-12!63;CL:0000559!3.02e-12!63;CL:0000766!8.18e-12!76;CL:0002009!4.83e-11!65;CL:0002057!5.53e-10!42;CL:0000860!1.19e-09!45;CL:0000057!3.60e-08!75;CL:0000055!6.29e-08!180;CL:0002620!4.73e-07!23 | |ontology_enrichment_celltype=CL:0000839!9.11e-13!70;CL:0000557!1.14e-12!71;CL:0002194!3.02e-12!63;CL:0000576!3.02e-12!63;CL:0000040!3.02e-12!63;CL:0000559!3.02e-12!63;CL:0000766!8.18e-12!76;CL:0002009!4.83e-11!65;CL:0002057!5.53e-10!42;CL:0000860!1.19e-09!45;CL:0000057!3.60e-08!75;CL:0000055!6.29e-08!180;CL:0002620!4.73e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.01e-07;48!CL:0000473;3.02e-07;39!CL:0000234;3.02e-07;39!CL:0000860;4.06e-07;33!CL:0002057;4.06e-07;33!CL:0000766;6.51e-07;69 | |ontology_enrichment_celltype_v019=CL:0000576;1.01e-07;48!CL:0000473;3.02e-07;39!CL:0000234;3.02e-07;39!CL:0000860;4.06e-07;33!CL:0002057;4.06e-07;33!CL:0000766;6.51e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000839,2.07e-13,66;CL:0000557,4.72e-13,67;CL:0002194,1.18e-12,59;CL:0000576,1.18e-12,59;CL:0000040,1.18e-12,59;CL:0000559,1.18e-12,59;CL:0000766,1.81e-12,72;CL:0000473,1.91e-11,48;CL:0000234,1.91e-11,48;CL:0002009,2.30e-11,61;CL:0000860,3.32e-10,42;CL:0002057,3.32e-10,42;CL:0000057,9.71e-09,76;CL:0002620,3.39e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-07;42 | |ontology_enrichment_development_v019=CL:0002057;1.35e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!2.34e-17!448;UBERON:0004120!2.34e-17!448;UBERON:0006603!2.34e-17!448;UBERON:0002204!3.01e-16!167;UBERON:0000062!2.71e-15!511;UBERON:0000467!6.05e-15!625;UBERON:0000480!7.70e-15!626;UBERON:0000468!2.39e-14!659;UBERON:0004765!5.74e-13!101;UBERON:0001434!5.74e-13!101;UBERON:0002371!2.33e-12!80;UBERON:0001474!5.94e-12!86;UBERON:0003102!1.76e-11!95;UBERON:0000923!2.00e-08!604;UBERON:0005291!2.00e-08!604;UBERON:0006598!2.00e-08!604;UBERON:0002532!2.00e-08!604;UBERON:0002050!2.17e-08!605;UBERON:0005423!2.17e-08!605;UBERON:0000922!1.13e-07!612;UBERON:0002405!1.74e-07!115;UBERON:0002100!7.24e-07!216 | |ontology_enrichment_uberon=UBERON:0000926!2.34e-17!448;UBERON:0004120!2.34e-17!448;UBERON:0006603!2.34e-17!448;UBERON:0002204!3.01e-16!167;UBERON:0000062!2.71e-15!511;UBERON:0000467!6.05e-15!625;UBERON:0000480!7.70e-15!626;UBERON:0000468!2.39e-14!659;UBERON:0004765!5.74e-13!101;UBERON:0001434!5.74e-13!101;UBERON:0002371!2.33e-12!80;UBERON:0001474!5.94e-12!86;UBERON:0003102!1.76e-11!95;UBERON:0000923!2.00e-08!604;UBERON:0005291!2.00e-08!604;UBERON:0006598!2.00e-08!604;UBERON:0002532!2.00e-08!604;UBERON:0002050!2.17e-08!605;UBERON:0005423!2.17e-08!605;UBERON:0000922!1.13e-07!612;UBERON:0002405!1.74e-07!115;UBERON:0002100!7.24e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.05e-16,167;UBERON:0001434,1.17e-13,100;UBERON:0002371,6.57e-13,76;UBERON:0001474,1.47e-12,82;UBERON:0004765,2.97e-12,90;UBERON:0000926,9.27e-12,315;UBERON:0004120,9.27e-12,315;UBERON:0006603,9.27e-12,315;UBERON:0003102,1.06e-11,99;UBERON:0002405,9.05e-09,93;UBERON:0000923,2.36e-07,560;UBERON:0010316,2.36e-07,560;UBERON:0005291,2.36e-07,560;UBERON:0006598,2.36e-07,560;UBERON:0010317,2.36e-07,560;UBERON:0002532,2.36e-07,560;UBERON:0002050,3.06e-07,564 | |||
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| ||
|short_description=p10@CAST | |short_description=p10@CAST | ||
}} | }} |
Latest revision as of 08:57, 19 September 2015
Short description: | p10@CAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CAST_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000511097, NM_001042440_5end |
EntrezGene: | CAST |
HGNC: | 1515 |
UniProt: | F8W7E0P20810Q86YM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 2.07e-13 | 66 |
granulocyte monocyte progenitor cell | 4.72e-13 | 67 |
monopoietic cell | 1.18e-12 | 59 |
monocyte | 1.18e-12 | 59 |
monoblast | 1.18e-12 | 59 |
promonocyte | 1.18e-12 | 59 |
myeloid leukocyte | 1.81e-12 | 72 |
defensive cell | 1.91e-11 | 48 |
phagocyte | 1.91e-11 | 48 |
macrophage dendritic cell progenitor | 2.30e-11 | 61 |
classical monocyte | 3.32e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.32e-10 | 42 |
fibroblast | 9.71e-09 | 76 |
skin fibroblast | 3.39e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.05e-16 | 167 |
skeletal system | 1.17e-13 | 100 |
bone marrow | 6.57e-13 | 76 |
bone element | 1.47e-12 | 82 |
skeletal element | 2.97e-12 | 90 |
mesoderm | 9.27e-12 | 315 |
mesoderm-derived structure | 9.27e-12 | 315 |
presumptive mesoderm | 9.27e-12 | 315 |
surface structure | 1.06e-11 | 99 |
immune system | 9.05e-09 | 93 |
germ layer | 2.36e-07 | 560 |
germ layer / neural crest | 2.36e-07 | 560 |
embryonic tissue | 2.36e-07 | 560 |
presumptive structure | 2.36e-07 | 560 |
germ layer / neural crest derived structure | 2.36e-07 | 560 |
epiblast (generic) | 2.36e-07 | 560 |
embryonic structure | 3.06e-07 | 564 |