FFCP PHASE1:Hg19::chr14:23652343..23652348,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23428 | |EntrezGene=23428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11066 | |HGNC=11066 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHI5 | |UniProt=Q9UHI5 | ||
|association_with_transcript=0bp_to_AF135828,AF171669_5end | |association_with_transcript=0bp_to_AF135828,AF171669_5end | ||
|cluster_id=chr14:23652343..23652348,- | |||
|description=CAGE_peak_2_at_SLC7A8_5end | |description=CAGE_peak_2_at_SLC7A8_5end | ||
|id=chr14:23652343..23652348,- | |id=chr14:23652343..23652348,- | ||
|ontology_enrichment_celltype=CL:0000325!1.07e-10!39;CL:0000147!5.05e-10!14;CL:0002077!2.96e-08!33;CL:0000710!9.24e-08!20;CL:0000148!2.15e-07!10;CL:0000541!2.15e-07!10 | |ontology_enrichment_celltype=CL:0000325!1.07e-10!39;CL:0000147!5.05e-10!14;CL:0002077!2.96e-08!33;CL:0000710!9.24e-08!20;CL:0000148!2.15e-07!10;CL:0000541!2.15e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000147;1.45e-11;14!CL:0000148;1.87e-08;10!CL:0000710;5.12e-08;20!CL:0002077;9.93e-08;34 | |ontology_enrichment_celltype_v019=CL:0000147;1.45e-11;14!CL:0000148;1.87e-08;10!CL:0000710;5.12e-08;20!CL:0002077;9.93e-08;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0000147,1.33e-11,14;CL:0000148,1.74e-08,10;CL:0000541,1.74e-08,10;CL:0002077,2.98e-08,34;CL:0000710,5.37e-08,20 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.79e-19!115;UBERON:0002346!1.36e-12!90;UBERON:0000924!2.08e-12!173;UBERON:0006601!2.08e-12!173;UBERON:0004121!3.18e-11!169;UBERON:0003075!3.42e-11!86;UBERON:0007284!3.42e-11!86;UBERON:0000033!6.40e-10!123;UBERON:0000153!9.50e-10!129;UBERON:0007811!9.50e-10!129;UBERON:0003056!1.21e-09!61;UBERON:0005743!7.87e-09!86;UBERON:0001049!8.16e-09!57;UBERON:0005068!8.16e-09!57;UBERON:0006241!8.16e-09!57;UBERON:0007135!8.16e-09!57;UBERON:0000073!1.28e-08!94;UBERON:0001016!1.28e-08!94;UBERON:0002616!2.44e-08!59;UBERON:0002780!1.48e-07!41;UBERON:0001890!1.48e-07!41;UBERON:0006240!1.48e-07!41;UBERON:0003080!1.68e-07!42;UBERON:0001017!3.39e-07!82 | |ontology_enrichment_uberon=UBERON:0007023!1.79e-19!115;UBERON:0002346!1.36e-12!90;UBERON:0000924!2.08e-12!173;UBERON:0006601!2.08e-12!173;UBERON:0004121!3.18e-11!169;UBERON:0003075!3.42e-11!86;UBERON:0007284!3.42e-11!86;UBERON:0000033!6.40e-10!123;UBERON:0000153!9.50e-10!129;UBERON:0007811!9.50e-10!129;UBERON:0003056!1.21e-09!61;UBERON:0005743!7.87e-09!86;UBERON:0001049!8.16e-09!57;UBERON:0005068!8.16e-09!57;UBERON:0006241!8.16e-09!57;UBERON:0007135!8.16e-09!57;UBERON:0000073!1.28e-08!94;UBERON:0001016!1.28e-08!94;UBERON:0002616!2.44e-08!59;UBERON:0002780!1.48e-07!41;UBERON:0001890!1.48e-07!41;UBERON:0006240!1.48e-07!41;UBERON:0003080!1.68e-07!42;UBERON:0001017!3.39e-07!82 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.66e-18,114;UBERON:0010371,6.67e-14,104;UBERON:0002346,5.73e-13,86;UBERON:0004121,1.54e-12,171;UBERON:0000924,1.54e-12,171;UBERON:0006601,1.54e-12,171;UBERON:0003075,2.27e-11,82;UBERON:0007284,2.27e-11,82;UBERON:0003056,2.91e-11,61;UBERON:0000073,6.99e-10,53;UBERON:0002616,6.99e-10,53;UBERON:0001049,1.24e-09,56;UBERON:0005068,1.24e-09,56;UBERON:0006241,1.24e-09,56;UBERON:0007135,1.24e-09,56;UBERON:0001016,7.97e-09,89;UBERON:0002780,1.11e-08,41;UBERON:0001890,1.11e-08,41;UBERON:0003080,1.11e-08,41;UBERON:0006240,1.11e-08,41;UBERON:0001017,1.41e-08,81;UBERON:0000955,1.74e-07,68;UBERON:0006238,1.74e-07,68;UBERON:0001869,5.13e-07,32 | |||
|phase1_expression=17.2594460307029,3.8538094300377,12.4039875604455,4.00293193412522,8.49226079411847,1.74467704820074,5.06599756336621,2.52687949370732,2.87304191019822,1.47440361900905,4.18680700783456,0.655324116390517,0.263766978228454,0.866364470720326,0.662794751455832,1.34465029290355,0,0,0,2.46242116153576,1.22400414746552,0.626909442956176,0,0,0,0,0,0,2.36018566109342,0,0,0.919421224478927,0.6024118375565,4.06729411183466,0.0774672005803016,0,0.587200878669695,0.553995408531877,0,0,55.0832066630214,22.0247692892906,27.0454346015896,3.48955773070955,0.755751887377619,0.970336244751265,1.16214518452842,0.822335776043652,0.619412741790207,0.575384784644301,0,0,0.689491361473237,0,0,0.941211697713023,0.272906150057846,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.445641827540694,0.294605907474837,0.664601683750863,0.270803863765016,1.0247305578054,0.390178042679635,0.164437904603676,0.276350017785848,0,0.296573126324121,2.94294910898684,1.04535523804977,0.113309342697566,0.383220493601921,1.03088233644789,0.506039384039006,2.22995790026868,0.651083453856419,1.90090408889675,0,0.255973222308837,1.24930726552346,0.236777252044017,2.46338399076314,0.403213486449465,0,0.579297615531196,0,3.35350429851818,0.12786256184353,3.61439152384566,4.01070328508712,7.09747942908036,16.7010048880731,6.32625331393427,15.4091751977431,6.20842312895179,4.83091321312193,19.7778404001546,22.5863078741376,11.1235332835329,85.031417137527,77.8359925727725,66.6119382199514,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446498641420399,0,0.112611480483322,0,0,0.366403487860815,0,0,4.36094052142534,0,0.12663051166458,0,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0,0,4.54072282934794,5.76175924479999,0,0,0,0.149448680551801,0.23486899728753,0,0,0.816616685019573,0.122834317311768,0.309977343527296,3.56400857184616,0.494533858557114,0,0,0.168336113954066,0,0,0.438977620880838,0.30648779579902,1.05166641234618,0.113432183160021,1.61450672119976,0.427114777637135,0.211931901159562,3.30100205692843,0.206105058476878,1.54584324027377,0.558350568994769,14.8523172372314,9.06164147999147,2.27190396819703,0.0920498986422993,0.80823028409406,4.26011511019937,3.82857973265033,1.86516651541536,8.31021668602176,3.27295344709002,3.44165514466805,6.70855383712775,8.61443494089654,7.20402445791014,4.97573064073778,9.58819233327388,18.6138453128673,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.7041661019826,0,0,0,4.13552934676983,0,5.28850285735388,9.60779737671743,17.9990468070146,1.1240175325762,3.01586917234893,5.83307204498736,0,0,1.44331342025273,12.7523445472585,0.70445216541493,0.144366447761074,0,0,0,0,27.5763046817885,19.1883497414175,14.4172227420066,3.74935335947108,0.839910640994298,2.1266264586358,3.40322386270824,3.19697332365358,3.83382679165211,3.94130590316755,9.50923087342841,0.621984346622316,0.720599767084807,1.8936365013957,68.2602363640817,79.83558094168,37.509583107215,54.7431827272657,17.172191281455,46.2528309079633,16.5779330925735,0.224262168690721,0,0.07333828582095,0,0,0,0.797814349754612,0,0,0,0.266422179016099,1.14382394926518,11.3950537132203,0,0,0.710783897485092,0,14.7705294759197,4.35766729300147,13.996218765488,9.72990245129524,9.04062764577828,12.6500363689819,0,0,0,0.723906533337896,4.31500277355805,2.32779252211864,0,0.197030760201927,0.215627574859517,0.256686072559497,2.28685161800217,0,0,1.00509759200609,0.637938751653163,0,0,0,3.18997878469764,1.00034104211935,1.08506009479894,0.415941723061614,1.07057393278297,0.157702415033935,0.117141414992713,1.50473049863859,4.5481500811197,0,0,0.184369168541703,1.30325421702124,1.76221041716467,2.05886054286514,0.206768026122887,0,0,0,0,0,7.93944985020086,11.8165719431808,7.57782254969299,0.512556597022804,1.02341449813341,0.321707842287215,1.48418066444991,0.154209693802656,1.06537035187876,2.13530605635904,0,2.20799719073923,6.40555082835598,5.21316822788541,3.77532054637175,0.114814448164607,0,0.131124414959424,0.902399225814824,1.00119938235739,0,2.92278449306521,0.633309773357254,0,0,0,0,1.89662506280697,3.51182841698397,0.764628819135115,2.49322802678617,0,0.438519753291869,0,72.3189352828217,82.3316760706261,118.112357263142,5.25509159403384,0,0.330037999682352,9.18824860793876,7.15066270640173,0,1.45006077438183,0,0.614014698904518,0,0.322260734604821,0.145016693914229,0.426133137080504,0.712256285173899,1.65284915360978,0.384380134730212,0.510450849978337,1.0115778085555,0,1.25924938732256,0,0.308033580176089,0,1.73986598415015,0,0,1.116475108079,0,0,1.02359116524534,1.28381696410176,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0,0,0,0,0,0,0,0,5.65040583101214,1.65409603063837,0,0,1.15755106853338,5.9030527684197,0,1.54911749049875,0,0,0,0,4.96665489698837,9.28873595309722,0.987884678879706,0.75894634753143,0,5.09977197445214,1.34060455107157,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| ||
|short_description=p2@SLC7A8 | |short_description=p2@SLC7A8 | ||
}} | }} |
Latest revision as of 09:11, 19 September 2015
Short description: | p2@SLC7A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC7A8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AF135828, AF171669_5end |
EntrezGene: | SLC7A8 |
HGNC: | 11066 |
UniProt: | Q9UHI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 1.33e-11 | 14 |
melanocyte | 1.74e-08 | 10 |
melanoblast | 1.74e-08 | 10 |
ecto-epithelial cell | 2.98e-08 | 34 |
neurecto-epithelial cell | 5.37e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.66e-18 | 114 |
ecto-epithelium | 6.67e-14 | 104 |
neurectoderm | 5.73e-13 | 86 |
ectoderm-derived structure | 1.54e-12 | 171 |
ectoderm | 1.54e-12 | 171 |
presumptive ectoderm | 1.54e-12 | 171 |
neural plate | 2.27e-11 | 82 |
presumptive neural plate | 2.27e-11 | 82 |
pre-chordal neural plate | 2.91e-11 | 61 |
regional part of nervous system | 6.99e-10 | 53 |
regional part of brain | 6.99e-10 | 53 |
neural tube | 1.24e-09 | 56 |
neural rod | 1.24e-09 | 56 |
future spinal cord | 1.24e-09 | 56 |
neural keel | 1.24e-09 | 56 |
nervous system | 7.97e-09 | 89 |
regional part of forebrain | 1.11e-08 | 41 |
forebrain | 1.11e-08 | 41 |
anterior neural tube | 1.11e-08 | 41 |
future forebrain | 1.11e-08 | 41 |
central nervous system | 1.41e-08 | 81 |
brain | 1.74e-07 | 68 |
future brain | 1.74e-07 | 68 |
cerebral hemisphere | 5.13e-07 | 32 |