FFCP PHASE1:Hg19::chr12:56709786..56709846,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10330 | |EntrezGene=10330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13529 | |HGNC=13529 | ||
|TSSclassifier=strong | |||
|UniProt=F8VP03,F8W1U5,F8VXJ7 | |UniProt=F8VP03,F8W1U5,F8VXJ7 | ||
|association_with_transcript=0bp_to_ENST00000547423,ENST00000548013,ENST00000548360,ENST00000551475_5end | |association_with_transcript=0bp_to_ENST00000547423,ENST00000548013,ENST00000548360,ENST00000551475_5end | ||
|cluster_id=chr12:56709786..56709846,- | |||
|description=CAGE_peak_1_at_CNPY2_5end | |description=CAGE_peak_1_at_CNPY2_5end | ||
|id=chr12:56709786..56709846,- | |id=chr12:56709786..56709846,- | ||
|ontology_enrichment_celltype=CL:0000548!1.66e-27!679;CL:0000004!1.66e-27!679;CL:0000255!1.66e-27!679;CL:0000012!2.79e-27!682;CL:0002321!5.71e-22!248;CL:0000220!2.78e-21!246;CL:0000055!2.81e-19!180;CL:0000144!5.03e-19!625;CL:0000222!7.80e-18!119;CL:0000003!1.37e-17!722;CL:0000066!7.62e-16!254;CL:0002371!1.43e-12!591;CL:0000183!7.61e-10!59;CL:0000680!9.95e-09!57;CL:0000056!9.95e-09!57;CL:0000355!9.95e-09!57;CL:0000393!2.50e-08!60;CL:0000211!2.50e-08!60;CL:0000063!3.19e-08!578;CL:0000213!3.29e-08!57;CL:0000215!3.29e-08!57;CL:0000187!5.72e-08!54;CL:0000192!1.12e-07!42;CL:0000514!1.12e-07!42;CL:1000449!1.18e-07!16;CL:1000497!8.88e-07!18;CL:0002518!8.88e-07!18 | |ontology_enrichment_celltype=CL:0000548!1.66e-27!679;CL:0000004!1.66e-27!679;CL:0000255!1.66e-27!679;CL:0000012!2.79e-27!682;CL:0002321!5.71e-22!248;CL:0000220!2.78e-21!246;CL:0000055!2.81e-19!180;CL:0000144!5.03e-19!625;CL:0000222!7.80e-18!119;CL:0000003!1.37e-17!722;CL:0000066!7.62e-16!254;CL:0002371!1.43e-12!591;CL:0000183!7.61e-10!59;CL:0000680!9.95e-09!57;CL:0000056!9.95e-09!57;CL:0000355!9.95e-09!57;CL:0000393!2.50e-08!60;CL:0000211!2.50e-08!60;CL:0000063!3.19e-08!578;CL:0000213!3.29e-08!57;CL:0000215!3.29e-08!57;CL:0000187!5.72e-08!54;CL:0000192!1.12e-07!42;CL:0000514!1.12e-07!42;CL:1000449!1.18e-07!16;CL:1000497!8.88e-07!18;CL:0002518!8.88e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.22e-08;15!CL:1000497;1.40e-07;17!CL:0002518;1.40e-07;17!CL:0002681;2.60e-07;12!CL:0002584;2.60e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.75e-22,250;CL:0000222,1.01e-17,121;CL:0000066,3.87e-16,253;CL:1000449,1.11e-08,15;CL:0000213,1.56e-08,58;CL:0000215,1.56e-08,58;CL:0000680,2.78e-08,58;CL:0000056,2.78e-08,58;CL:0000355,2.78e-08,58;CL:0000393,6.53e-08,61;CL:0000211,6.53e-08,61;CL:1000497,1.26e-07,17;CL:0002518,1.26e-07,17;CL:0000187,1.54e-07,55;CL:0002681,2.40e-07,12;CL:0002584,2.40e-07,12;CL:0000192,3.42e-07,43;CL:0000514,3.42e-07,43;CL:0002078,4.86e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.76e-08!239;DOID:162!1.79e-07!235;DOID:2394!8.70e-07!14 | |ontology_enrichment_disease=DOID:14566!3.76e-08!239;DOID:162!1.79e-07!235;DOID:2394!8.70e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.14e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.76e-08,239;DOID:162,1.79e-07,235;DOID:2394,8.70e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003914!6.92e-11!118;UBERON:0002049!1.19e-09!79;UBERON:0007798!1.19e-09!79;UBERON:0005256!2.53e-09!143;UBERON:0002100!1.56e-08!216;UBERON:0000486!3.75e-08!82;UBERON:0003104!5.97e-08!238;UBERON:0009142!5.97e-08!238;UBERON:0000490!8.73e-08!138;UBERON:0004211!1.18e-07!16;UBERON:0001285!1.18e-07!16;UBERON:0007684!1.18e-07!16;UBERON:0003220!1.18e-07!16;UBERON:0004208!1.18e-07!16;UBERON:0000055!1.53e-07!69;UBERON:0004290!3.84e-07!70;UBERON:0000914!6.09e-07!83;UBERON:0002329!6.09e-07!83;UBERON:0003077!6.09e-07!83;UBERON:0003059!6.09e-07!83;UBERON:0007282!6.09e-07!83;UBERON:0009618!6.09e-07!83;UBERON:0007285!6.09e-07!83;UBERON:0006555!8.34e-07!17;UBERON:0005103!8.34e-07!17;UBERON:0000083!8.34e-07!17;UBERON:0009201!8.34e-07!17;UBERON:0004819!8.34e-07!17;UBERON:0006553!8.34e-07!17;UBERON:0003074!8.34e-07!17;UBERON:0003060!8.34e-07!17;UBERON:0001981!8.37e-07!60;UBERON:0007500!8.37e-07!60;UBERON:0004537!8.37e-07!60;UBERON:0006965!8.37e-07!60;UBERON:0001134!8.65e-07!61;UBERON:0002036!8.65e-07!61;UBERON:0003082!8.65e-07!61;UBERON:0000353!8.66e-07!17 | |ontology_enrichment_uberon=UBERON:0003914!6.92e-11!118;UBERON:0002049!1.19e-09!79;UBERON:0007798!1.19e-09!79;UBERON:0005256!2.53e-09!143;UBERON:0002100!1.56e-08!216;UBERON:0000486!3.75e-08!82;UBERON:0003104!5.97e-08!238;UBERON:0009142!5.97e-08!238;UBERON:0000490!8.73e-08!138;UBERON:0004211!1.18e-07!16;UBERON:0001285!1.18e-07!16;UBERON:0007684!1.18e-07!16;UBERON:0003220!1.18e-07!16;UBERON:0004208!1.18e-07!16;UBERON:0000055!1.53e-07!69;UBERON:0004290!3.84e-07!70;UBERON:0000914!6.09e-07!83;UBERON:0002329!6.09e-07!83;UBERON:0003077!6.09e-07!83;UBERON:0003059!6.09e-07!83;UBERON:0007282!6.09e-07!83;UBERON:0009618!6.09e-07!83;UBERON:0007285!6.09e-07!83;UBERON:0006555!8.34e-07!17;UBERON:0005103!8.34e-07!17;UBERON:0000083!8.34e-07!17;UBERON:0009201!8.34e-07!17;UBERON:0004819!8.34e-07!17;UBERON:0006553!8.34e-07!17;UBERON:0003074!8.34e-07!17;UBERON:0003060!8.34e-07!17;UBERON:0001981!8.37e-07!60;UBERON:0007500!8.37e-07!60;UBERON:0004537!8.37e-07!60;UBERON:0006965!8.37e-07!60;UBERON:0001134!8.65e-07!61;UBERON:0002036!8.65e-07!61;UBERON:0003082!8.65e-07!61;UBERON:0000353!8.66e-07!17 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.22e-08;15!UBERON:0004819;1.22e-08;15!UBERON:0001285;1.22e-08;15!UBERON:0007684;1.22e-08;15!UBERON:0000353;4.86e-08;15!UBERON:0001225;2.60e-07;12!UBERON:0008987;2.60e-07;12!UBERON:0003914;5.05e-07;74 | |||
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51037 | ||
|short_description=p1@CNPY2 | |short_description=p1@CNPY2 | ||
}} | }} |
Latest revision as of 10:44, 19 September 2015
Short description: | p1@CNPY2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CNPY2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000547423, ENST00000548013, ENST00000548360, ENST00000551475_5end |
EntrezGene: | CNPY2 |
HGNC: | 13529 |
UniProt: | F8VP03F8W1U5F8VXJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.75e-22 | 250 |
mesodermal cell | 1.01e-17 | 121 |
epithelial cell | 3.87e-16 | 253 |
epithelial cell of nephron | 1.11e-08 | 15 |
lining cell | 1.56e-08 | 58 |
barrier cell | 1.56e-08 | 58 |
muscle precursor cell | 2.78e-08 | 58 |
myoblast | 2.78e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.78e-08 | 58 |
electrically responsive cell | 6.53e-08 | 61 |
electrically active cell | 6.53e-08 | 61 |
kidney cell | 1.26e-07 | 17 |
kidney epithelial cell | 1.26e-07 | 17 |
muscle cell | 1.54e-07 | 55 |
kidney cortical cell | 2.40e-07 | 12 |
renal cortical epithelial cell | 2.40e-07 | 12 |
smooth muscle cell | 3.42e-07 | 43 |
smooth muscle myoblast | 3.42e-07 | 43 |
meso-epithelial cell | 4.86e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.09e-11 | 117 |
vasculature | 9.58e-10 | 78 |
vascular system | 9.58e-10 | 78 |
epithelial vesicle | 2.74e-09 | 78 |
mesenchyme | 5.97e-09 | 160 |
entire embryonic mesenchyme | 5.97e-09 | 160 |
nephron epithelium | 1.11e-08 | 15 |
renal tubule | 1.11e-08 | 15 |
nephron tubule | 1.11e-08 | 15 |
nephron | 1.11e-08 | 15 |
uriniferous tubule | 1.11e-08 | 15 |
nephrogenic mesenchyme | 1.11e-08 | 15 |
trunk | 1.15e-08 | 199 |
parenchyma | 4.50e-08 | 15 |
unilaminar epithelium | 5.25e-08 | 148 |
multilaminar epithelium | 8.25e-08 | 83 |
excretory tube | 1.08e-07 | 16 |
kidney epithelium | 1.08e-07 | 16 |
vessel | 1.27e-07 | 68 |
cortex of kidney | 2.40e-07 | 12 |
renal parenchyma | 2.40e-07 | 12 |
trunk mesenchyme | 3.99e-07 | 122 |
epithelial tube open at both ends | 6.91e-07 | 59 |
blood vessel | 6.91e-07 | 59 |
blood vasculature | 6.91e-07 | 59 |
vascular cord | 6.91e-07 | 59 |
somite | 8.40e-07 | 71 |
presomitic mesoderm | 8.40e-07 | 71 |
presumptive segmental plate | 8.40e-07 | 71 |
dermomyotome | 8.40e-07 | 71 |
trunk paraxial mesoderm | 8.40e-07 | 71 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.76e-08 | 239 |
cancer | 1.79e-07 | 235 |
ovarian cancer | 8.70e-07 | 14 |