FFCP PHASE1:Hg19::chr18:3845250..3845266,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9229 | |EntrezGene=9229 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2905 | |HGNC=2905 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=60bp_to_ENST00000484845_5end | |association_with_transcript=60bp_to_ENST00000484845_5end | ||
|cluster_id=chr18:3845250..3845266,- | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_15_at_DLGAP1_5end | |description=CAGE_peak_15_at_DLGAP1_5end | ||
|id=chr18:3845250..3845266,- | |id=chr18:3845250..3845266,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;7.67e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.94e-11,10 | |||
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|short_description=p15@DLGAP1 | |short_description=p15@DLGAP1 | ||
}} | }} |
Latest revision as of 12:14, 19 September 2015
Short description: | p15@DLGAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_DLGAP1_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | 60bp_to_ENST00000484845_5end |
EntrezGene: | DLGAP1 |
HGNC: | 2905 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 9.93e-21 | 5 |
neocortex | 3.24e-19 | 20 |
regional part of cerebral cortex | 1.36e-17 | 22 |
cerebral cortex | 1.27e-15 | 25 |
pallium | 1.27e-15 | 25 |
middle frontal gyrus | 1.07e-13 | 2 |
amygdala | 1.37e-13 | 2 |
regional part of telencephalon | 2.05e-12 | 32 |
cerebral hemisphere | 2.05e-12 | 32 |
brain grey matter | 9.91e-12 | 34 |
gray matter | 9.91e-12 | 34 |
telencephalon | 9.91e-12 | 34 |
neurectoderm | 2.52e-10 | 86 |
regional part of forebrain | 7.57e-10 | 41 |
forebrain | 7.57e-10 | 41 |
anterior neural tube | 7.57e-10 | 41 |
future forebrain | 7.57e-10 | 41 |
frontal cortex | 1.41e-09 | 3 |
regional part of nervous system | 9.60e-08 | 53 |
regional part of brain | 9.60e-08 | 53 |
neural tube | 2.35e-07 | 56 |
neural rod | 2.35e-07 | 56 |
future spinal cord | 2.35e-07 | 56 |
neural keel | 2.35e-07 | 56 |
pre-chordal neural plate | 8.65e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.94e-11 | 10 |