FFCP PHASE1:Hg19::chr5:10353997..10354010,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:10353997..10354010,+ to FFCP PHASE1:Hg19::chr5:10353997..10354010,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10299 | |EntrezGene=10299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30550 | |HGNC=30550 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000510872_5end | |||
|cluster_id=chr5:10353997..10354010,+ | |||
|description=CAGE_peak_2_at_MARCH6_5end | |||
|id=chr5:10353997..10354010,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.08e-07!140 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.22e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.65e-12!106;DOID:0050687!3.97e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.22e-12,106;DOID:0050687,3.49e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002780!4.88e-10!41;UBERON:0001890!4.88e-10!41;UBERON:0006240!4.88e-10!41;UBERON:0003080!2.39e-09!42;UBERON:0001869!8.81e-09!32;UBERON:0001049!9.06e-09!57;UBERON:0005068!9.06e-09!57;UBERON:0006241!9.06e-09!57;UBERON:0007135!9.06e-09!57;UBERON:0001893!1.04e-08!34;UBERON:0002619!1.06e-08!22;UBERON:0001950!1.45e-08!20;UBERON:0001017!2.62e-08!82;UBERON:0002791!2.97e-08!33;UBERON:0007023!7.17e-08!115;UBERON:0002020!7.18e-08!34;UBERON:0003528!7.18e-08!34;UBERON:0000955!7.83e-08!69;UBERON:0006238!7.83e-08!69;UBERON:0000956!1.54e-07!25;UBERON:0000203!1.54e-07!25;UBERON:0002616!3.73e-07!59;UBERON:0005743!4.47e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.34e-08;22!UBERON:0001950;1.52e-08;20!UBERON:0001869;5.06e-08;32!UBERON:0001893;7.51e-08;34!UBERON:0002791;2.07e-07;32!UBERON:0002780;2.36e-07;41!UBERON:0001890;2.36e-07;41!UBERON:0000956;2.67e-07;25!UBERON:0000203;2.67e-07;25!UBERON:0003528;3.18e-07;34!UBERON:0002020;3.18e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,4.81e-10,41;UBERON:0001890,4.81e-10,41;UBERON:0003080,4.81e-10,41;UBERON:0006240,4.81e-10,41;UBERON:0001049,2.55e-09,56;UBERON:0005068,2.55e-09,56;UBERON:0006241,2.55e-09,56;UBERON:0007135,2.55e-09,56;UBERON:0000073,2.56e-09,53;UBERON:0002616,2.56e-09,53;UBERON:0001869,8.69e-09,32;UBERON:0001017,9.78e-09,81;UBERON:0001893,1.03e-08,34;UBERON:0002619,1.04e-08,22;UBERON:0001950,1.43e-08,20;UBERON:0000955,2.76e-08,68;UBERON:0006238,2.76e-08,68;UBERON:0011216,4.31e-08,223;UBERON:0002791,5.03e-08,32;UBERON:0003528,7.09e-08,34;UBERON:0002020,7.09e-08,34;UBERON:0007023,9.42e-08,114;UBERON:0000956,1.52e-07,25;UBERON:0000203,1.52e-07,25;UBERON:0001016,4.45e-07,89 | |||
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| ||
|short_description=p2@MARCH6 | |||
}} | }} |
Latest revision as of 13:57, 19 September 2015
Short description: | p2@MARCH6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MARCH6_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_ENST00000510872_5end |
EntrezGene: | MARCH6 |
HGNC: | 30550 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.22e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 4.81e-10 | 41 |
forebrain | 4.81e-10 | 41 |
anterior neural tube | 4.81e-10 | 41 |
future forebrain | 4.81e-10 | 41 |
neural tube | 2.55e-09 | 56 |
neural rod | 2.55e-09 | 56 |
future spinal cord | 2.55e-09 | 56 |
neural keel | 2.55e-09 | 56 |
regional part of nervous system | 2.56e-09 | 53 |
regional part of brain | 2.56e-09 | 53 |
cerebral hemisphere | 8.69e-09 | 32 |
central nervous system | 9.78e-09 | 81 |
telencephalon | 1.03e-08 | 34 |
regional part of cerebral cortex | 1.04e-08 | 22 |
neocortex | 1.43e-08 | 20 |
brain | 2.76e-08 | 68 |
future brain | 2.76e-08 | 68 |
organ system subdivision | 4.31e-08 | 223 |
regional part of telencephalon | 5.03e-08 | 32 |
brain grey matter | 7.09e-08 | 34 |
gray matter | 7.09e-08 | 34 |
adult organism | 9.42e-08 | 114 |
cerebral cortex | 1.52e-07 | 25 |
pallium | 1.52e-07 | 25 |
nervous system | 4.45e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.22e-12 | 106 |
cell type cancer | 3.49e-07 | 143 |