FFCP PHASE1:Hg19::chr11:6677018..6677065,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8642 | |EntrezGene=8642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13681 | |HGNC=13681 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JQ0 | |UniProt=Q96JQ0 | ||
|association_with_transcript=8bp_to_NM_003737,uc001mem.1_5end | |association_with_transcript=8bp_to_NM_003737,uc001mem.1_5end | ||
|cluster_id=chr11:6677018..6677065,- | |||
|description=CAGE_peak_1_at_DCHS1_5end | |description=CAGE_peak_1_at_DCHS1_5end | ||
|id=chr11:6677018..6677065,- | |id=chr11:6677018..6677065,- | ||
|ontology_enrichment_celltype=CL:0000115!2.04e-12!35;CL:0002139!3.37e-11!24;CL:0002078!2.33e-09!44;CL:0000071!1.35e-08!18;CL:0002546!1.35e-08!18 | |ontology_enrichment_celltype=CL:0000115!2.04e-12!35;CL:0002139!3.37e-11!24;CL:0002078!2.33e-09!44;CL:0000071!1.35e-08!18;CL:0002546!1.35e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.92e-12;24!CL:0000115;5.90e-12;36!CL:0000071;1.90e-09;18!CL:0002078;6.29e-07;45 | |ontology_enrichment_celltype_v019=CL:0002139;1.92e-12;24!CL:0000115;5.90e-12;36!CL:0000071;1.90e-09;18!CL:0002078;6.29e-07;45 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.75e-14,36;CL:0002139,1.33e-12,24;CL:0002078,2.88e-10,45;CL:0000071,1.27e-09,18;CL:0002546,1.27e-09,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.90e-09;18 | |ontology_enrichment_development_v019=CL:0002546;1.90e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.10e-15!94;UBERON:0001016!1.10e-15!94;UBERON:0007023!2.20e-15!115;UBERON:0001017!1.00e-13!82;UBERON:0005743!2.10e-13!86;UBERON:0000924!3.11e-12!173;UBERON:0006601!3.11e-12!173;UBERON:0002346!3.47e-12!90;UBERON:0000477!6.54e-12!286;UBERON:0004121!2.64e-11!169;UBERON:0003075!3.95e-11!86;UBERON:0007284!3.95e-11!86;UBERON:0002049!6.80e-11!79;UBERON:0007798!6.80e-11!79;UBERON:0004111!2.07e-10!241;UBERON:0001049!4.14e-10!57;UBERON:0005068!4.14e-10!57;UBERON:0006241!4.14e-10!57;UBERON:0007135!4.14e-10!57;UBERON:0000955!5.94e-10!69;UBERON:0006238!5.94e-10!69;UBERON:0002616!7.39e-10!59;UBERON:0000025!8.60e-10!194;UBERON:0001009!4.34e-09!113;UBERON:0004535!9.14e-09!110;UBERON:0000055!1.02e-08!69;UBERON:0001986!1.35e-08!18;UBERON:0004638!1.35e-08!18;UBERON:0004852!1.35e-08!18;UBERON:0000153!2.73e-08!129;UBERON:0007811!2.73e-08!129;UBERON:0000119!4.01e-08!312;UBERON:0000483!6.80e-08!309;UBERON:0000033!1.25e-07!123;UBERON:0000468!1.25e-07!659;UBERON:0003056!3.70e-07!61;UBERON:0001981!7.57e-07!60;UBERON:0007500!7.57e-07!60;UBERON:0004537!7.57e-07!60;UBERON:0006965!7.57e-07!60;UBERON:0004872!7.61e-07!84;UBERON:0003080!9.23e-07!42 | |ontology_enrichment_uberon=UBERON:0000073!1.10e-15!94;UBERON:0001016!1.10e-15!94;UBERON:0007023!2.20e-15!115;UBERON:0001017!1.00e-13!82;UBERON:0005743!2.10e-13!86;UBERON:0000924!3.11e-12!173;UBERON:0006601!3.11e-12!173;UBERON:0002346!3.47e-12!90;UBERON:0000477!6.54e-12!286;UBERON:0004121!2.64e-11!169;UBERON:0003075!3.95e-11!86;UBERON:0007284!3.95e-11!86;UBERON:0002049!6.80e-11!79;UBERON:0007798!6.80e-11!79;UBERON:0004111!2.07e-10!241;UBERON:0001049!4.14e-10!57;UBERON:0005068!4.14e-10!57;UBERON:0006241!4.14e-10!57;UBERON:0007135!4.14e-10!57;UBERON:0000955!5.94e-10!69;UBERON:0006238!5.94e-10!69;UBERON:0002616!7.39e-10!59;UBERON:0000025!8.60e-10!194;UBERON:0001009!4.34e-09!113;UBERON:0004535!9.14e-09!110;UBERON:0000055!1.02e-08!69;UBERON:0001986!1.35e-08!18;UBERON:0004638!1.35e-08!18;UBERON:0004852!1.35e-08!18;UBERON:0000153!2.73e-08!129;UBERON:0007811!2.73e-08!129;UBERON:0000119!4.01e-08!312;UBERON:0000483!6.80e-08!309;UBERON:0000033!1.25e-07!123;UBERON:0000468!1.25e-07!659;UBERON:0003056!3.70e-07!61;UBERON:0001981!7.57e-07!60;UBERON:0007500!7.57e-07!60;UBERON:0004537!7.57e-07!60;UBERON:0006965!7.57e-07!60;UBERON:0004872!7.61e-07!84;UBERON:0003080!9.23e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.90e-09;18!UBERON:0001986;1.90e-09;18!UBERON:0004852;1.90e-09;18!UBERON:0000922;2.31e-08;49 | |ontology_enrichment_uberon_v019=UBERON:0004638;1.90e-09;18!UBERON:0001986;1.90e-09;18!UBERON:0004852;1.90e-09;18!UBERON:0000922;2.31e-08;49 | ||
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|short_description=p1@DCHS1 | |short_description=p1@DCHS1 | ||
}} | }} |
Latest revision as of 16:30, 19 September 2015
Short description: | p1@DCHS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DCHS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_NM_003737, uc001mem.1_5end |
EntrezGene: | DCHS1 |
HGNC: | 13681 |
UniProt: | Q96JQ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.75e-14 | 36 |
endothelial cell of vascular tree | 1.33e-12 | 24 |
meso-epithelial cell | 2.88e-10 | 45 |
blood vessel endothelial cell | 1.27e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.27e-09 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.42e-14 | 114 |
nervous system | 8.19e-14 | 89 |
central nervous system | 2.90e-12 | 81 |
neurectoderm | 1.92e-11 | 86 |
ectoderm-derived structure | 8.82e-11 | 171 |
ectoderm | 8.82e-11 | 171 |
presumptive ectoderm | 8.82e-11 | 171 |
neural plate | 1.24e-10 | 82 |
presumptive neural plate | 1.24e-10 | 82 |
organ system subdivision | 8.94e-10 | 223 |
anatomical conduit | 1.07e-09 | 240 |
blood vessel endothelium | 1.27e-09 | 18 |
endothelium | 1.27e-09 | 18 |
cardiovascular system endothelium | 1.27e-09 | 18 |
vasculature | 2.68e-09 | 78 |
vascular system | 2.68e-09 | 78 |
structure with developmental contribution from neural crest | 4.38e-09 | 132 |
neural tube | 4.55e-09 | 56 |
neural rod | 4.55e-09 | 56 |
future spinal cord | 4.55e-09 | 56 |
neural keel | 4.55e-09 | 56 |
regional part of nervous system | 6.41e-09 | 53 |
regional part of brain | 6.41e-09 | 53 |
brain | 1.24e-08 | 68 |
future brain | 1.24e-08 | 68 |
tube | 1.39e-08 | 192 |
vessel | 5.10e-08 | 68 |
circulatory system | 1.12e-07 | 112 |
cardiovascular system | 1.40e-07 | 109 |
ecto-epithelium | 1.77e-07 | 104 |