FFCP PHASE1:Hg19::chr17:35294075..35294102,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|EntrezGene= | |DHSsupport=supported | ||
|HGNC= | |DPIdataset=robust | ||
|UniProt= | |EntrezGene=3975 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=0bp_to_ENST00000559335_5end | |association_with_transcript=0bp_to_ENST00000559335_5end | ||
|cluster_id=chr17:35294075..35294102,+ | |||
|coexpression_cluster_id=C3624 | |coexpression_cluster_id=C3624 | ||
|description= | |description=CAGE_peak_7_at_LHX1_5end | ||
|id=chr17:35294075..35294102,+ | |id=chr17:35294075..35294102,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.10e-13!254;CL:1000497!6.17e-13!18;CL:0002518!6.17e-13!18;CL:1000507!4.86e-12!12;CL:1000494!4.86e-12!12;CL:1000449!1.66e-11!16;CL:0002681!3.15e-08!13;CL:0002584!3.15e-08!13;CL:0000077!6.50e-07!19 | |ontology_enrichment_celltype=CL:0000066!1.10e-13!254;CL:1000497!6.17e-13!18;CL:0002518!6.17e-13!18;CL:1000507!4.86e-12!12;CL:1000494!4.86e-12!12;CL:1000449!1.66e-11!16;CL:0002681!3.15e-08!13;CL:0002584!3.15e-08!13;CL:0000077!6.50e-07!19 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0000489,7.98e-33,31;UBERON:0002113,5.14e-28,26;UBERON:0003918,5.14e-28,26;UBERON:0011143,5.14e-28,26;UBERON:0005095,5.14e-28,26;UBERON:0007687,5.14e-28,26;UBERON:0004810,3.39e-21,10;UBERON:0006555,2.79e-20,16;UBERON:0004819,2.79e-20,16;UBERON:0004211,1.25e-18,15;UBERON:0009773,1.25e-18,15;UBERON:0001231,1.25e-18,15;UBERON:0001285,1.25e-18,15;UBERON:0007684,1.25e-18,15;UBERON:0004208,1.25e-18,15;UBERON:0003076,1.02e-16,15;UBERON:0003057,1.02e-16,15;UBERON:0006554,6.47e-16,47;UBERON:0001008,1.89e-15,48;UBERON:0003103,1.33e-14,68;UBERON:0005172,3.54e-14,54;UBERON:0005173,3.54e-14,54;UBERON:0005177,5.41e-14,101;UBERON:0001225,5.77e-13,12;UBERON:0008987,5.77e-13,12;UBERON:0004733,2.06e-12,12;UBERON:0002028,2.06e-12,12;UBERON:0007277,2.06e-12,12;UBERON:0002417,4.10e-12,60;UBERON:0000916,4.10e-12,60;UBERON:0004732,2.64e-11,13;UBERON:0002298,4.10e-11,6;UBERON:0001851,5.79e-10,15;UBERON:0000353,5.79e-10,15;UBERON:0009569,3.22e-08,112;UBERON:0002680,4.64e-08,9;UBERON:0001895,4.64e-08,9;UBERON:0010092,4.64e-08,9;UBERON:0000080,7.92e-08,9;UBERON:0002120,7.92e-08,9;UBERON:0004875,7.92e-08,9;UBERON:0005721,7.92e-08,9;UBERON:0005754,7.92e-08,9;UBERON:0007297,7.92e-08,9;UBERON:0006853,3.97e-07,3;UBERON:0007685,3.97e-07,3;UBERON:0004134,3.97e-07,3;UBERON:0006947,4.40e-07,3;UBERON:0004054,4.40e-07,3;UBERON:0001264,9.02e-07,10 | |ontology_enrichment_uberon_v019_2=UBERON:0000489,7.98e-33,31;UBERON:0002113,5.14e-28,26;UBERON:0003918,5.14e-28,26;UBERON:0011143,5.14e-28,26;UBERON:0005095,5.14e-28,26;UBERON:0007687,5.14e-28,26;UBERON:0004810,3.39e-21,10;UBERON:0006555,2.79e-20,16;UBERON:0004819,2.79e-20,16;UBERON:0004211,1.25e-18,15;UBERON:0009773,1.25e-18,15;UBERON:0001231,1.25e-18,15;UBERON:0001285,1.25e-18,15;UBERON:0007684,1.25e-18,15;UBERON:0004208,1.25e-18,15;UBERON:0003076,1.02e-16,15;UBERON:0003057,1.02e-16,15;UBERON:0006554,6.47e-16,47;UBERON:0001008,1.89e-15,48;UBERON:0003103,1.33e-14,68;UBERON:0005172,3.54e-14,54;UBERON:0005173,3.54e-14,54;UBERON:0005177,5.41e-14,101;UBERON:0001225,5.77e-13,12;UBERON:0008987,5.77e-13,12;UBERON:0004733,2.06e-12,12;UBERON:0002028,2.06e-12,12;UBERON:0007277,2.06e-12,12;UBERON:0002417,4.10e-12,60;UBERON:0000916,4.10e-12,60;UBERON:0004732,2.64e-11,13;UBERON:0002298,4.10e-11,6;UBERON:0001851,5.79e-10,15;UBERON:0000353,5.79e-10,15;UBERON:0009569,3.22e-08,112;UBERON:0002680,4.64e-08,9;UBERON:0001895,4.64e-08,9;UBERON:0010092,4.64e-08,9;UBERON:0000080,7.92e-08,9;UBERON:0002120,7.92e-08,9;UBERON:0004875,7.92e-08,9;UBERON:0005721,7.92e-08,9;UBERON:0005754,7.92e-08,9;UBERON:0007297,7.92e-08,9;UBERON:0006853,3.97e-07,3;UBERON:0007685,3.97e-07,3;UBERON:0004134,3.97e-07,3;UBERON:0006947,4.40e-07,3;UBERON:0004054,4.40e-07,3;UBERON:0001264,9.02e-07,10 | ||
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| ||
|short_description= | |short_description=p7@LHX1 | ||
}} | }} |
Latest revision as of 17:18, 19 September 2015
Short description: | p7@LHX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LHX1_5end |
Coexpression cluster: | C3624_cerebellum_serous_papillary_Renal_signet_teratocarcinoma_osteosarcoma |
Association with transcript: | 0bp_to_ENST00000559335_5end |
EntrezGene: | LHX1 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 3.39e-21 | 10 |
nephron tubule epithelial cell | 3.39e-21 | 10 |
epithelial cell of nephron | 1.25e-18 | 15 |
kidney cell | 1.29e-18 | 17 |
kidney epithelial cell | 1.29e-18 | 17 |
kidney cortical cell | 5.77e-13 | 12 |
renal cortical epithelial cell | 5.77e-13 | 12 |
epithelial cell | 3.90e-11 | 253 |
brush border epithelial cell | 3.97e-07 | 3 |
kidney cortex tubule cell | 3.97e-07 | 3 |
epithelial cell of proximal tubule | 3.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.33e-13 | 106 |
cell type cancer | 5.09e-11 | 143 |
adenocarcinoma | 2.52e-09 | 25 |
cancer | 1.14e-07 | 235 |
disease of cellular proliferation | 2.83e-07 | 239 |