FFCP PHASE1:Hg19::chr3:8543272..8543276,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29995 | |EntrezGene=29995 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6633 | |HGNC=6633 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZU5 | |UniProt=Q9NZU5 | ||
|association_with_transcript=-116bp_to_ENST00000157600_5end | |||
|cluster_id=chr3:8543272..8543276,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_7_at_LMCD1_5end | |||
|id=chr3:8543272..8543276,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.05e-12!15;CL:0000632!1.23e-07!2;CL:0002617!2.61e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000322;2.74e-12;3!CL:0002615;2.74e-12;3!CL:0000632;2.74e-12;3!CL:0000136;3.47e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,2.31e-12,3;CL:0000322,2.89e-12,3;CL:0002615,3.24e-12,3;CL:0000136,8.46e-10,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!2.09e-08!6;UBERON:0002358!2.09e-08!6;UBERON:0003684!2.09e-08!6;UBERON:0001178!2.09e-08!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;1.84e-34;1!UBERON:0000026;1.84e-34;1!UBERON:0008784;1.84e-34;1!UBERON:0006058;1.84e-34;1!UBERON:0003663;1.84e-34;1!UBERON:0004256;1.84e-34;1!UBERON:0004708;1.84e-34;1!UBERON:0002101;1.84e-34;1!UBERON:0004709;1.84e-34;1!UBERON:0002529;1.84e-34;1!UBERON:0010538;1.84e-34;1!UBERON:0003661;1.84e-34;1!UBERON:0010890;1.84e-34;1!UBERON:0002471;1.84e-34;1!UBERON:0001383;1.84e-34;1!UBERON:0010758;1.84e-34;1!UBERON:0010707;1.84e-34;1!UBERON:0000978;1.84e-34;1!UBERON:0002103;1.84e-34;1!UBERON:0001665;1.84e-34;1!UBERON:0003823;1.84e-34;1!UBERON:0000154;1.84e-34;1!UBERON:0010709;1.84e-34;1!UBERON:0005090;5.48e-18;2!UBERON:0001630;5.48e-18;2!UBERON:0004821;2.74e-12;3!UBERON:0007499;2.74e-12;3!UBERON:0003215;2.74e-12;3!UBERON:0010368;2.74e-12;3!UBERON:0009911;2.74e-12;3!UBERON:0002299;2.74e-12;3!UBERON:0006524;2.74e-12;3!UBERON:0008874;2.74e-12;3!UBERON:0002169;2.74e-12;3!UBERON:0004894;2.74e-12;3!UBERON:0009856;1.50e-09;4!UBERON:0001134;2.72e-09;16!UBERON:0002036;2.72e-09;16!UBERON:0003688;8.72e-07;6!UBERON:0002358;8.72e-07;6!UBERON:0003684;8.72e-07;6!UBERON:0001178;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,1.84e-34,1;UBERON:0001389,1.84e-34,1;UBERON:0000026,1.84e-34,1;UBERON:0008784,1.84e-34,1;UBERON:0006058,1.84e-34,1;UBERON:0003663,1.84e-34,1;UBERON:0004256,1.84e-34,1;UBERON:0004708,1.84e-34,1;UBERON:0002101,1.84e-34,1;UBERON:0004709,1.84e-34,1;UBERON:0002529,1.84e-34,1;UBERON:0010538,1.84e-34,1;UBERON:0003661,1.84e-34,1;UBERON:0010890,1.84e-34,1;UBERON:0002471,1.84e-34,1;UBERON:0001383,1.84e-34,1;UBERON:0004357,1.84e-34,1;UBERON:0004347,1.84e-34,1;UBERON:0005420,1.84e-34,1;UBERON:0005732,1.84e-34,1;UBERON:0010758,1.84e-34,1;UBERON:0010707,1.84e-34,1;UBERON:0000978,1.84e-34,1;UBERON:0002103,1.84e-34,1;UBERON:0001665,1.84e-34,1;UBERON:0003823,1.84e-34,1;UBERON:0000154,1.84e-34,1;UBERON:0010709,1.84e-34,1;UBERON:0005733,1.84e-34,1;UBERON:0005730,1.84e-34,1;UBERON:0005090,5.48e-18,2;UBERON:0001630,5.48e-18,2;UBERON:0004821,2.89e-12,3;UBERON:0003215,2.89e-12,3;UBERON:0010368,2.89e-12,3;UBERON:0009911,2.89e-12,3;UBERON:0002299,2.89e-12,3;UBERON:0006524,2.89e-12,3;UBERON:0008874,2.89e-12,3;UBERON:0002169,2.89e-12,3;UBERON:0004894,2.89e-12,3;UBERON:0003688,9.49e-07,6;UBERON:0002358,9.49e-07,6;UBERON:0003684,9.49e-07,6;UBERON:0001178,9.49e-07,6 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,1.0007329835313,0,0,0,0,0,1.22866968250754,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.410623275218653,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,2.14441903734423,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,14.8908632553216,1.43727929598746,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,1.0007329835313,0,0,0,0,0,1.22866968250754,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.410623275218653,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0.168336113954066,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0.184099797284599,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,2.14441903734423,0.655745261419609,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,14.8908632553216,1.43727929598746,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0.0636471582781649,0,0.435433495793923,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@LMCD1 | |||
}} | }} |
Latest revision as of 17:45, 19 September 2015
Short description: | p7@LMCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LMCD1_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | -116bp_to_ENST00000157600_5end |
EntrezGene: | LMCD1 |
HGNC: | 6633 |
UniProt: | Q9NZU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 2.31e-12 | 3 |
pneumocyte | 2.89e-12 | 3 |
adipocyte of omentum tissue | 3.24e-12 | 3 |
fat cell | 8.46e-10 | 15 |