FFCP PHASE1:Hg19::chr7:81399678..81399704,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3082 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4893 | |||
|TSSclassifier=strong | |||
|UniProt=C9JDP4 | |||
|association_with_transcript=9bp_to_ENST00000412881_5end | |||
|cluster_id=chr7:81399678..81399704,- | |||
|description=CAGE_peak_8_at_HGF_5end | |||
|id=chr7:81399678..81399704,- | |||
|ontology_enrichment_celltype=CL:0002057!7.92e-20!42;CL:0002194!2.15e-19!63;CL:0000576!2.15e-19!63;CL:0000040!2.15e-19!63;CL:0000559!2.15e-19!63;CL:0000766!5.81e-19!76;CL:0000839!1.66e-18!70;CL:0002009!3.44e-18!65;CL:0000557!5.89e-18!71;CL:0000860!1.99e-17!45;CL:0000763!6.75e-13!112;CL:0000049!6.75e-13!112;CL:0000048!1.82e-09!430;CL:0000723!1.04e-08!436;CL:0000034!3.56e-08!444;CL:0002393!6.05e-07!9;CL:0002397!6.05e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000576;7.93e-15;48!CL:0000473;6.19e-12;39!CL:0000234;6.19e-12;39!CL:0000860;8.10e-11;33!CL:0002057;8.10e-11;33!CL:0000766;2.24e-10;69!CL:0002619;2.51e-08;3!CL:0000875;2.21e-07;3!CL:0002396;2.21e-07;3!CL:0002622;7.99e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.71e-22,59;CL:0000576,3.71e-22,59;CL:0000040,3.71e-22,59;CL:0000559,3.71e-22,59;CL:0002009,3.63e-21,61;CL:0000473,6.44e-21,48;CL:0000234,6.44e-21,48;CL:0000839,5.90e-19,66;CL:0000557,1.49e-18,67;CL:0000860,3.52e-18,42;CL:0002057,3.52e-18,42;CL:0000766,4.57e-18,72;CL:0000763,1.47e-13,108;CL:0000049,1.47e-13,108;CL:0000048,1.60e-11,427;CL:0000034,3.44e-11,441;CL:0000723,4.23e-11,433;CL:0002320,1.64e-08,361;CL:0002087,1.69e-08,115;CL:0000134,1.70e-08,354;CL:0002393,2.43e-08,9;CL:0002397,2.43e-08,9;CL:0002619,2.58e-08,3;CL:0002031,7.58e-08,120;CL:0000875,1.23e-07,3;CL:0002396,1.23e-07,3;CL:0002032,5.71e-07,161;CL:0000837,5.71e-07,161;CL:0000037,6.87e-07,168;CL:0002622,8.69e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;5.23e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.85e-25!167;UBERON:0002371!1.70e-19!80;UBERON:0004765!9.66e-19!101;UBERON:0001434!9.66e-19!101;UBERON:0002390!1.45e-18!102;UBERON:0003061!1.45e-18!102;UBERON:0001474!2.00e-17!86;UBERON:0002193!1.03e-15!112;UBERON:0002405!6.99e-13!115;UBERON:0007023!1.12e-11!115;UBERON:0000923!5.21e-10!604;UBERON:0005291!5.21e-10!604;UBERON:0006598!5.21e-10!604;UBERON:0002532!5.21e-10!604;UBERON:0003081!5.70e-10!216;UBERON:0002050!6.98e-10!605;UBERON:0005423!6.98e-10!605;UBERON:0000922!9.15e-10!612;UBERON:0000467!9.52e-10!625;UBERON:0000480!1.27e-09!626;UBERON:0000479!3.88e-09!787;UBERON:0000914!1.17e-08!83;UBERON:0002329!1.17e-08!83;UBERON:0003077!1.17e-08!83;UBERON:0003059!1.17e-08!83;UBERON:0007282!1.17e-08!83;UBERON:0009618!1.17e-08!83;UBERON:0007285!1.17e-08!83;UBERON:0000468!1.64e-08!659;UBERON:0000062!1.75e-08!511;UBERON:0000926!7.31e-08!448;UBERON:0004120!7.31e-08!448;UBERON:0006603!7.31e-08!448;UBERON:0002385!8.04e-07!63;UBERON:0001015!8.04e-07!63;UBERON:0000383!8.04e-07!63 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.29e-19,76;UBERON:0002204,8.77e-19,167;UBERON:0001434,3.20e-18,100;UBERON:0001474,1.56e-17,82;UBERON:0004765,2.69e-16,90;UBERON:0002405,1.95e-14,93;UBERON:0002390,2.17e-14,98;UBERON:0003061,2.17e-14,98;UBERON:0002193,2.97e-12,108;UBERON:0000926,7.28e-11,315;UBERON:0004120,7.28e-11,315;UBERON:0006603,7.28e-11,315;UBERON:0003081,1.84e-10,203;UBERON:0002384,5.68e-09,371;UBERON:0000923,8.64e-07,560;UBERON:0010316,8.64e-07,560;UBERON:0005291,8.64e-07,560;UBERON:0006598,8.64e-07,560;UBERON:0010317,8.64e-07,560;UBERON:0002532,8.64e-07,560 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.704772020479856,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0.618831764800233,0.662794751455832,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0.383829398097213,1.23852898652861,0,0,0,0.0774672005803016,0,1.17440175733939,0.553995408531877,0.601633342410425,0.434021741431704,10.0761963407966,4.21061765824673,12.1060516788068,1.74477886535478,1.13362783106643,0.970336244751265,0.929716147622738,0.822335776043652,0.619412741790207,2.3015391385772,0,1.41889337933151,1.37898272294647,1.29096936716765,1.35426486594342,1.50593871634084,0.818718450173537,0.224723484445085,0.918251677112708,0.641858054152187,0,1.31940520074686,0.797854630486527,1.70489900213078,0.580418477257168,1.13477044938228,1.86846674698672,0.502497330513487,0,1.52032191293582,0,0.736555271975129,0.949387162322653,2.74631872205524,2.12604299965044,1.04829322754188,2.13424399178341,2.55300717830561,1.6072558669708,2.56511469367124,4.37616689837998,1.82664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37045676297569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0.821127996921047,0,0,0,0,2.68280343881454,0.383587685530591,0,0,0,0,0,0,0.221729397462564,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,3.15520282823695,0,0,0,0,1.55605517699883,0.67355336034844,2.7788523529288,0.908144565869588,1.15235184896,0,0.624320153660641,1.1409436430889,1.64393548606981,0.117434498643765,0,0,1.83738754129404,0.737005903870608,0.929932030581889,1.18800285728205,0.989067717114227,0,0,1.0100166837244,1.12606667884768,1.6623846929051,1.31693286264251,0.30648779579902,0.901428353439581,0.113432183160021,0,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0,0,0,3.93947209739836,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.720599767084807,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,4.86125178437702,0,0,0.325736184293735,3.19852753868291,0,0,0,0.099972991182057,3.64871341923571,7.03159928004977,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0.749007023947182,0,0.414415513436035,0.613457458595699,1.00034104211935,0,0,0,0.157702415033935,0,0,0,0,0.664225598535437,0.184369168541703,0.781952530212746,0,0,0.82707210449155,0,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0,0,1.07946785661859,0.355123450626254,0.821271560138091,2.07701771673448,1.16210378459959,0,0,0,1.83703117063371,1.0925470080403,2.09799063935079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0.650060246036521,0,0.193341436584244,0,0.460511024178389,0.275673144969061,0.537101224341368,0.145016693914229,0.426133137080504,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,2.60979897622522,0,0.715624433709956,0,0.316379424718726,1.14378116354295,0,0,3.18203247925937,0.78494864019923,0.899362287916574,2.19629623788844,1.29593642580255,0.606547444719948,0,0.421258456238981,0,0.974853958525138,1.05650146756755,1.36499911407986,2.12108147930569,3.39024349860728,0,0.66343897524122,0.438450885253763,1.15755106853338,1.9676842561399,0,0,1.12678241012897,0.573645408816206,0,0,0.709522128141196,0,0,0.379473173765715,0,0,0,0,1.41215701165169,0,0,0,0,2.02979043692868,0.764637207142375,0.569647187174163,0.714695326373367,0.411362273086194,0,0,0.79312517629427,0,0,0.245040215981032,0,0,0,0,8.3823336001783,0,0,0,0.280797178113459,0,0.313359791546046,0,0,0,0,2.55507742614196,9.96165499791718,0.614481528616916,1.11838053946208,0.166849141711909,0.586164286206121,0,0,0,0,0,11.7898540457178,0.439524537815682,0,0,0,0,0,0,1.9882952955326,0.281338832821026,0,0,0,0.597743964753209,0.828851746593443,0,0,0,0,0,0,0,0.789147245095469,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0,0,1.06606955203727,0,6.90713128138109,0.664846727600626,0,0,0,0,0.476809736941136,0,0,0,0,0,0.176915129006678,0,0,0,0,0.269604531922708,3.21031058919516,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0.316553979779393,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.837847203816763,0,0,0,0.429226048136571,0.446342914883745,0.201550417460179,1.08089965062721,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.546746009922222,0,0.157611414598396,0.157363764404994,0,0,0,2.85878130549347,0,0,0.542999601753713,0.864221491201268,0.653174720218818,0,0.164185041498678,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0.39669780522807,0,0,1.28144895081234,1.10043013569766,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.1251909307065,0,0.332787154610557,0.558867626472451,0,0,0,0,0,0,0,0.74627401443437,0,0.554805861502613,0.947015026375446,0.754703705257725,1.77962244319307,1.60188047877847,0.604923695052956,1.08806040407946,0.887130899937803,0.318593534327405,0.449803112163605,0,1.24411862352257,0.265841714557995,0.521745061811734,0.300515217994437,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0.163565394255844,0,0.245772908753719,0,0.79994958341972,0,2.58322469491223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0.705351887381368,3.3687002508852,0.449604575675217,0,0,0.41023272848151,0,0.138314504928436,0.807378228159255,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.540300676947157,0,0.206686796501184,0.634158101939068,0.546974809018219,0,1.48863353516788,1.23109871051734,0,0,0.336283722218824,0.606965604236632,0,1.77404740325278,0,0,0.951576261675644,0.394636641377094,0,0,0.78493092850514,0.157115589916002,0,0,0,0.47775168788705,0.857718530119876,0,2.09234565662625,2.26015753993353,4.00855682365126,0,0,0,0,0.236664001461131,0.170426809518315,0.846774100381858,0,0,0,0,0,0,0,0.615976841137482,0,0.485710993059139,0,0,0.713520544665411,0,0,0,0.0771741581079447,0.218559560503957,0,0.980593287015622,0,0.392616934229891,0.594092800654172,0,0,0.0939839179798536,0.45120521581504,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0.436350690340377,0,0.371995018166751,0,0,0.126166424835079,0,0,0,0,0,0,0.454672189309436,0,0,0.20686599172379,0.213233981900981,0.714193294391221,0.0645889098360061,0.186224142887574,0,0.12729431655633,0.808468755832877,0.870866991587845,0,0.134704106029175,0.286888821570705,0,0,0,0,0,0,0,0,1.99727032255654,0.402547587182052,0 | |||
|short_description=p8@HGF | |||
}} |
Latest revision as of 18:08, 19 September 2015
Short description: | p8@HGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HGF_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000412881_5end |
EntrezGene: | HGF |
HGNC: | 4893 |
UniProt: | C9JDP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.29e-19 | 76 |
musculoskeletal system | 8.77e-19 | 167 |
skeletal system | 3.20e-18 | 100 |
bone element | 1.56e-17 | 82 |
skeletal element | 2.69e-16 | 90 |
immune system | 1.95e-14 | 93 |
hematopoietic system | 2.17e-14 | 98 |
blood island | 2.17e-14 | 98 |
hemolymphoid system | 2.97e-12 | 108 |
mesoderm | 7.28e-11 | 315 |
mesoderm-derived structure | 7.28e-11 | 315 |
presumptive mesoderm | 7.28e-11 | 315 |
lateral plate mesoderm | 1.84e-10 | 203 |
connective tissue | 5.68e-09 | 371 |
germ layer | 8.64e-07 | 560 |
germ layer / neural crest | 8.64e-07 | 560 |
embryonic tissue | 8.64e-07 | 560 |
presumptive structure | 8.64e-07 | 560 |
germ layer / neural crest derived structure | 8.64e-07 | 560 |
epiblast (generic) | 8.64e-07 | 560 |