FFCP PHASE1:Hg19::chr12:6309517..6309575,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=928 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1709 | |||
|TSSclassifier=strong | |||
|UniProt=E7ERM7,B4DPP0 | |||
|association_with_transcript=0bp_to_ENST00000382519,ENST00000425469,ENST00000543424,ENST00000546073,uc001qnq.1,uc010seu.1,uc010sev.1_5end | |||
|cluster_id=chr12:6309517..6309575,+ | |||
|coexpression_cluster_id=C3314 | |||
|description=CAGE_peak_1_at_CD9_5end | |||
|id=chr12:6309517..6309575,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.05e-30!254;CL:0002078!3.68e-16!44;CL:0000115!7.89e-16!35;CL:0002139!6.05e-14!24;CL:0002321!3.97e-13!248;CL:0000213!5.02e-13!57;CL:0000215!5.02e-13!57;CL:0000220!7.33e-13!246;CL:0000076!6.63e-12!62;CL:0000071!5.48e-11!18;CL:0002546!5.48e-11!18;CL:0002076!1.33e-09!43;CL:1000449!4.10e-07!16;CL:0000222!4.36e-07!119;CL:1000413!4.48e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000115;4.76e-14;36!CL:0002139;5.96e-14;24!CL:0002078;1.43e-11;45!CL:0000071;5.40e-11;18!CL:0000213;2.41e-08;58!CL:0000215;2.41e-08;58!CL:0002076;1.71e-07;42!CL:1000449;2.03e-07;15!CL:1000413;4.47e-07;9!CL:0002681;5.39e-07;12!CL:0002584;5.39e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.17e-30,253;CL:0002078,8.38e-17,45;CL:0000115,1.71e-16,36;CL:0002139,6.02e-14,24;CL:0000213,1.37e-13,58;CL:0000215,1.37e-13,58;CL:0002321,1.54e-13,250;CL:0000076,7.28e-12,63;CL:0000071,5.45e-11,18;CL:0002546,5.45e-11,18;CL:0002076,1.11e-09,42;CL:1000449,2.05e-07,15;CL:0000222,2.07e-07,121;CL:1000413,4.47e-07,9;CL:0002681,5.41e-07,12;CL:0002584,5.41e-07,12;CL:0000223,9.49e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;5.40e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.06e-25!659;UBERON:0000467!4.13e-23!625;UBERON:0000480!5.98e-23!626;UBERON:0000922!1.00e-21!612;UBERON:0002050!1.11e-19!605;UBERON:0005423!1.11e-19!605;UBERON:0000923!2.24e-19!604;UBERON:0005291!2.24e-19!604;UBERON:0006598!2.24e-19!604;UBERON:0002532!2.24e-19!604;UBERON:0004111!7.86e-16!241;UBERON:0000477!4.20e-15!286;UBERON:0000062!3.65e-14!511;UBERON:0000487!1.26e-11!22;UBERON:0001986!5.48e-11!18;UBERON:0004638!5.48e-11!18;UBERON:0004852!5.48e-11!18;UBERON:0000055!5.95e-11!69;UBERON:0000926!7.35e-11!448;UBERON:0004120!7.35e-11!448;UBERON:0006603!7.35e-11!448;UBERON:0000464!1.01e-10!104;UBERON:0006914!1.58e-10!25;UBERON:0004119!1.08e-09!169;UBERON:0000925!1.08e-09!169;UBERON:0006595!1.08e-09!169;UBERON:0001981!1.90e-09!60;UBERON:0007500!1.90e-09!60;UBERON:0004537!1.90e-09!60;UBERON:0006965!1.90e-09!60;UBERON:0001004!3.41e-09!72;UBERON:0000064!4.02e-09!219;UBERON:0002049!8.71e-09!79;UBERON:0007798!8.71e-09!79;UBERON:0003914!1.38e-08!118;UBERON:0000481!1.42e-08!347;UBERON:0000483!1.60e-08!309;UBERON:0000119!1.90e-08!312;UBERON:0004876!2.67e-08!20;UBERON:0001007!2.97e-08!155;UBERON:0001555!2.97e-08!155;UBERON:0007026!2.97e-08!155;UBERON:0000161!6.77e-08!35;UBERON:0000166!7.77e-08!21;UBERON:0000165!9.03e-08!28;UBERON:0000930!9.03e-08!28;UBERON:0000080!9.19e-08!18;UBERON:0002120!9.19e-08!18;UBERON:0004875!9.19e-08!18;UBERON:0005721!9.19e-08!18;UBERON:0005754!9.19e-08!18;UBERON:0007297!9.19e-08!18;UBERON:0001008!9.37e-08!45;UBERON:0006554!9.88e-08!44;UBERON:0002553!1.03e-07!70;UBERON:0000025!1.21e-07!194;UBERON:0000466!1.46e-07!126;UBERON:0003064!1.97e-07!37;UBERON:0003103!2.40e-07!69;UBERON:0000058!3.07e-07!26;UBERON:0006555!3.65e-07!17;UBERON:0005103!3.65e-07!17;UBERON:0000083!3.65e-07!17;UBERON:0009201!3.65e-07!17;UBERON:0004819!3.65e-07!17;UBERON:0006553!3.65e-07!17;UBERON:0003074!3.65e-07!17;UBERON:0003060!3.65e-07!17;UBERON:0004211!4.10e-07!16;UBERON:0001285!4.10e-07!16;UBERON:0007684!4.10e-07!16;UBERON:0003220!4.10e-07!16;UBERON:0004208!4.10e-07!16;UBERON:0003915!4.48e-07!9;UBERON:0004700!4.48e-07!9;UBERON:0001917!4.48e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.24e-11;22!UBERON:0004638;5.40e-11;18!UBERON:0001986;5.40e-11;18!UBERON:0004852;5.40e-11;18!UBERON:0006914;1.56e-10;25!UBERON:0000490;2.65e-09;33!UBERON:0000165;9.17e-08;28!UBERON:0006555;2.03e-07;15!UBERON:0004819;2.03e-07;15!UBERON:0001285;2.03e-07;15!UBERON:0007684;2.03e-07;15!UBERON:0003914;2.96e-07;74!UBERON:0003915;4.47e-07;9!UBERON:0004700;4.47e-07;9!UBERON:0001917;4.47e-07;9!UBERON:0001225;5.39e-07;12!UBERON:0008987;5.39e-07;12!UBERON:0000161;5.59e-07;19!UBERON:0000166;5.59e-07;19 | |||
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| |||
|short_description=p1@CD9 | |||
}} |
Latest revision as of 19:05, 19 September 2015
Short description: | p1@CD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD9_5end |
Coexpression cluster: | C3314_leiomyoma_Endothelial_Renal_Monocytederived_testicular_smallcell_mesenchymal |
Association with transcript: | 0bp_to_ENST00000382519, ENST00000425469, ENST00000543424, ENST00000546073, uc001qnq.1, uc010seu.1, uc010sev.1_5end |
EntrezGene: | CD9 |
HGNC: | 1709 |
UniProt: | E7ERM7B4DPP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.17e-30 | 253 |
meso-epithelial cell | 8.38e-17 | 45 |
endothelial cell | 1.71e-16 | 36 |
endothelial cell of vascular tree | 6.02e-14 | 24 |
lining cell | 1.37e-13 | 58 |
barrier cell | 1.37e-13 | 58 |
embryonic cell | 1.54e-13 | 250 |
squamous epithelial cell | 7.28e-12 | 63 |
blood vessel endothelial cell | 5.45e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.45e-11 | 18 |
endo-epithelial cell | 1.11e-09 | 42 |
epithelial cell of nephron | 2.05e-07 | 15 |
mesodermal cell | 2.07e-07 | 121 |
endothelial cell of artery | 4.47e-07 | 9 |
kidney cortical cell | 5.41e-07 | 12 |
renal cortical epithelial cell | 5.41e-07 | 12 |
endodermal cell | 9.49e-07 | 58 |