FFCP PHASE1:Hg19::chr1:201915590..201915722,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25802 | |EntrezGene=25802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6647 | |HGNC=6647 | ||
|TSSclassifier=strong | |||
|UniProt=P29536,F5H649 | |UniProt=P29536,F5H649 | ||
|association_with_transcript=0bp_to_ENST00000367288,ENST00000400965,ENST00000412469,NM_012134,uc001gxb.2,uc010ppu.1_5end | |association_with_transcript=0bp_to_ENST00000367288,ENST00000400965,ENST00000412469,NM_012134,uc001gxb.2,uc010ppu.1_5end | ||
|cluster_id=chr1:201915590..201915722,- | |||
|coexpression_cluster_id=C48 | |coexpression_cluster_id=C48 | ||
|description=CAGE_peak_1_at_LMOD1_5end | |description=CAGE_peak_1_at_LMOD1_5end | ||
|id=chr1:201915590..201915722,- | |id=chr1:201915590..201915722,- | ||
|ontology_enrichment_celltype=CL:0000055!6.59e-15!180;CL:0000057!3.15e-10!75;CL:0000136!7.67e-08!15;CL:0000187!8.88e-08!54;CL:0000192!9.86e-08!42;CL:0000514!9.86e-08!42;CL:0000183!1.09e-07!59;CL:0000680!1.44e-07!57;CL:0000056!1.44e-07!57;CL:0000355!1.44e-07!57;CL:0000393!3.28e-07!60;CL:0000211!3.28e-07!60 | |ontology_enrichment_celltype=CL:0000055!6.59e-15!180;CL:0000057!3.15e-10!75;CL:0000136!7.67e-08!15;CL:0000187!8.88e-08!54;CL:0000192!9.86e-08!42;CL:0000514!9.86e-08!42;CL:0000183!1.09e-07!59;CL:0000680!1.44e-07!57;CL:0000056!1.44e-07!57;CL:0000355!1.44e-07!57;CL:0000393!3.28e-07!60;CL:0000211!3.28e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0000136;9.85e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.76e-08,15;CL:0000057,1.93e-08,76;CL:0000192,1.07e-07,43;CL:0000514,1.07e-07,43;CL:0000187,1.99e-07,55;CL:0000680,9.97e-07,58;CL:0000056,9.97e-07,58;CL:0000355,9.97e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-36!115;UBERON:0000475!1.02e-19!365;UBERON:0000481!2.10e-15!347;UBERON:0000468!1.05e-12!659;UBERON:0000914!9.16e-11!83;UBERON:0002329!9.16e-11!83;UBERON:0003077!9.16e-11!83;UBERON:0003059!9.16e-11!83;UBERON:0007282!9.16e-11!83;UBERON:0009618!9.16e-11!83;UBERON:0007285!9.16e-11!83;UBERON:0001049!1.47e-10!57;UBERON:0005068!1.47e-10!57;UBERON:0006241!1.47e-10!57;UBERON:0007135!1.47e-10!57;UBERON:0003075!3.42e-10!86;UBERON:0007284!3.42e-10!86;UBERON:0002385!4.72e-10!63;UBERON:0001015!4.72e-10!63;UBERON:0000383!4.72e-10!63;UBERON:0002616!9.03e-10!59;UBERON:0004290!9.51e-10!70;UBERON:0005743!1.99e-09!86;UBERON:0002346!3.61e-09!90;UBERON:0001134!4.40e-09!61;UBERON:0002036!4.40e-09!61;UBERON:0003082!4.40e-09!61;UBERON:0001017!5.60e-09!82;UBERON:0000955!6.07e-09!69;UBERON:0006238!6.07e-09!69;UBERON:0000477!9.46e-09!286;UBERON:0000153!1.18e-08!129;UBERON:0007811!1.18e-08!129;UBERON:0000033!1.20e-08!123;UBERON:0003080!1.86e-08!42;UBERON:0000483!2.67e-08!309;UBERON:0000467!2.67e-08!625;UBERON:0000073!2.71e-08!94;UBERON:0001016!2.71e-08!94;UBERON:0000119!3.12e-08!312;UBERON:0004111!3.22e-08!241;UBERON:0000480!3.96e-08!626;UBERON:0002780!5.73e-08!41;UBERON:0001890!5.73e-08!41;UBERON:0006240!5.73e-08!41;UBERON:0004121!2.03e-07!169;UBERON:0003056!2.19e-07!61;UBERON:0003102!2.81e-07!95;UBERON:0005256!4.43e-07!143;UBERON:0000486!5.38e-07!82;UBERON:0000924!7.06e-07!173;UBERON:0006601!7.06e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!1.26e-36!115;UBERON:0000475!1.02e-19!365;UBERON:0000481!2.10e-15!347;UBERON:0000468!1.05e-12!659;UBERON:0000914!9.16e-11!83;UBERON:0002329!9.16e-11!83;UBERON:0003077!9.16e-11!83;UBERON:0003059!9.16e-11!83;UBERON:0007282!9.16e-11!83;UBERON:0009618!9.16e-11!83;UBERON:0007285!9.16e-11!83;UBERON:0001049!1.47e-10!57;UBERON:0005068!1.47e-10!57;UBERON:0006241!1.47e-10!57;UBERON:0007135!1.47e-10!57;UBERON:0003075!3.42e-10!86;UBERON:0007284!3.42e-10!86;UBERON:0002385!4.72e-10!63;UBERON:0001015!4.72e-10!63;UBERON:0000383!4.72e-10!63;UBERON:0002616!9.03e-10!59;UBERON:0004290!9.51e-10!70;UBERON:0005743!1.99e-09!86;UBERON:0002346!3.61e-09!90;UBERON:0001134!4.40e-09!61;UBERON:0002036!4.40e-09!61;UBERON:0003082!4.40e-09!61;UBERON:0001017!5.60e-09!82;UBERON:0000955!6.07e-09!69;UBERON:0006238!6.07e-09!69;UBERON:0000477!9.46e-09!286;UBERON:0000153!1.18e-08!129;UBERON:0007811!1.18e-08!129;UBERON:0000033!1.20e-08!123;UBERON:0003080!1.86e-08!42;UBERON:0000483!2.67e-08!309;UBERON:0000467!2.67e-08!625;UBERON:0000073!2.71e-08!94;UBERON:0001016!2.71e-08!94;UBERON:0000119!3.12e-08!312;UBERON:0004111!3.22e-08!241;UBERON:0000480!3.96e-08!626;UBERON:0002780!5.73e-08!41;UBERON:0001890!5.73e-08!41;UBERON:0006240!5.73e-08!41;UBERON:0004121!2.03e-07!169;UBERON:0003056!2.19e-07!61;UBERON:0003102!2.81e-07!95;UBERON:0005256!4.43e-07!143;UBERON:0000486!5.38e-07!82;UBERON:0000924!7.06e-07!173;UBERON:0006601!7.06e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.58e-09;114 | |||
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| ||
|short_description=p1@LMOD1 | |short_description=p1@LMOD1 | ||
}} | }} |
Latest revision as of 19:35, 19 September 2015
Short description: | p1@LMOD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LMOD1_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 0bp_to_ENST00000367288, ENST00000400965, ENST00000412469, NM_012134, uc001gxb.2, uc010ppu.1_5end |
EntrezGene: | LMOD1 |
HGNC: | 6647 |
UniProt: | P29536F5H649 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.76e-08 | 15 |
fibroblast | 1.93e-08 | 76 |
smooth muscle cell | 1.07e-07 | 43 |
smooth muscle myoblast | 1.07e-07 | 43 |
muscle cell | 1.99e-07 | 55 |
muscle precursor cell | 9.97e-07 | 58 |
myoblast | 9.97e-07 | 58 |
multi-potent skeletal muscle stem cell | 9.97e-07 | 58 |