FFCP PHASE1:Hg19::chr12:6451163..6451182,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6451163..6451182,-
|short_description=p3@TNFRSF1A
|description=CAGE_peak_3_at_TNFRSF1A_5end
|association_with_transcript=0bp_to_ENST00000538363,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7132 | |EntrezGene=7132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11916 | |HGNC=11916 | ||
|TSSclassifier=strong | |||
|UniProt=F5H4T5,F5H7N1 | |UniProt=F5H4T5,F5H7N1 | ||
|association_with_transcript=0bp_to_ENST00000538363,ENST00000543048,ENST00000543995_5end | |||
|cluster_id=chr12:6451163..6451182,- | |||
|description=CAGE_peak_3_at_TNFRSF1A_5end | |||
|id=chr12:6451163..6451182,- | |||
|ontology_enrichment_celltype=CL:0000860!2.03e-11!45;CL:0002057!2.78e-11!42;CL:0002194!3.60e-11!63;CL:0000576!3.60e-11!63;CL:0000040!3.60e-11!63;CL:0000559!3.60e-11!63;CL:0002009!6.82e-11!65;CL:0000766!2.28e-09!76;CL:0000222!1.00e-08!119;CL:0000183!2.00e-08!59;CL:0002371!2.19e-08!591;CL:0000680!2.39e-08!57;CL:0000056!2.39e-08!57;CL:0000355!2.39e-08!57;CL:0000557!1.16e-07!71;CL:0000187!1.66e-07!54;CL:0000144!2.82e-07!625;CL:0000048!6.30e-07!430;CL:0000839!6.55e-07!70;CL:0000055!9.77e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.16e-14;33!CL:0002057;2.16e-14;33!CL:0000473;4.86e-12;39!CL:0000234;4.86e-12;39!CL:0000576;3.75e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.07e-12,48;CL:0000234,8.07e-12,48;CL:0000860,2.76e-11,42;CL:0002057,2.76e-11,42;CL:0002194,4.22e-11,59;CL:0000576,4.22e-11,59;CL:0000040,4.22e-11,59;CL:0000559,4.22e-11,59;CL:0002009,8.33e-11,61;CL:0000766,2.92e-09,72;CL:0000222,8.47e-09,121;CL:0000680,1.11e-08,58;CL:0000056,1.11e-08,58;CL:0000355,1.11e-08,58;CL:0000187,7.86e-08,55;CL:0000557,1.55e-07,67;CL:0000048,6.83e-07,427;CL:0000839,8.94e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.94e-19!448;UBERON:0004120!3.94e-19!448;UBERON:0006603!3.94e-19!448;UBERON:0002204!1.10e-15!167;UBERON:0000467!7.57e-12!625;UBERON:0000468!8.87e-12!659;UBERON:0003081!1.32e-11!216;UBERON:0000480!1.63e-11!626;UBERON:0000923!2.86e-11!604;UBERON:0005291!2.86e-11!604;UBERON:0006598!2.86e-11!604;UBERON:0002532!2.86e-11!604;UBERON:0002050!3.79e-11!605;UBERON:0005423!3.79e-11!605;UBERON:0000922!6.99e-10!612;UBERON:0002405!1.58e-09!115;UBERON:0005256!2.56e-09!143;UBERON:0002100!4.55e-09!216;UBERON:0002371!5.75e-09!80;UBERON:0000486!2.36e-08!82;UBERON:0000479!3.22e-08!787;UBERON:0002390!3.34e-08!102;UBERON:0003061!3.34e-08!102;UBERON:0002385!4.85e-08!63;UBERON:0001015!4.85e-08!63;UBERON:0000383!4.85e-08!63;UBERON:0002193!5.54e-08!112;UBERON:0001134!1.64e-07!61;UBERON:0002036!1.64e-07!61;UBERON:0003082!1.64e-07!61;UBERON:0001474!2.19e-07!86;UBERON:0003104!2.89e-07!238;UBERON:0009142!2.89e-07!238;UBERON:0004290!3.05e-07!70;UBERON:0004765!3.61e-07!101;UBERON:0001434!3.61e-07!101;UBERON:0000914!6.97e-07!83;UBERON:0002329!6.97e-07!83;UBERON:0003077!6.97e-07!83;UBERON:0003059!6.97e-07!83;UBERON:0007282!6.97e-07!83;UBERON:0009618!6.97e-07!83;UBERON:0007285!6.97e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.15e-17,315;UBERON:0004120,1.15e-17,315;UBERON:0006603,1.15e-17,315;UBERON:0002204,6.98e-17,167;UBERON:0003081,2.70e-11,203;UBERON:0003104,6.23e-10,160;UBERON:0009142,6.23e-10,160;UBERON:0005256,8.64e-10,122;UBERON:0000923,1.17e-09,560;UBERON:0010316,1.17e-09,560;UBERON:0005291,1.17e-09,560;UBERON:0006598,1.17e-09,560;UBERON:0010317,1.17e-09,560;UBERON:0002532,1.17e-09,560;UBERON:0002050,2.87e-09,564;UBERON:0005423,3.16e-09,581;UBERON:0002100,4.85e-09,199;UBERON:0002371,7.63e-09,76;UBERON:0000922,1.17e-08,592;UBERON:0000486,1.18e-08,83;UBERON:0002385,2.32e-08,64;UBERON:0001015,2.32e-08,64;UBERON:0000383,2.32e-08,64;UBERON:0004765,3.43e-08,90;UBERON:0002390,4.64e-08,98;UBERON:0003061,4.64e-08,98;UBERON:0001434,7.55e-08,100;UBERON:0002193,7.86e-08,108;UBERON:0001134,7.96e-08,62;UBERON:0002036,7.96e-08,62;UBERON:0003082,7.96e-08,62;UBERON:0007503,1.17e-07,78;UBERON:0002329,1.53e-07,71;UBERON:0003059,1.53e-07,71;UBERON:0007282,1.53e-07,71;UBERON:0004290,1.53e-07,71;UBERON:0009618,1.53e-07,71;UBERON:0002405,2.30e-07,93;UBERON:0007524,2.95e-07,73;UBERON:0001474,3.10e-07,82;UBERON:0003077,3.94e-07,72;UBERON:0007285,3.94e-07,72;UBERON:0000490,5.33e-07,148;UBERON:0000479,7.06e-07,773 | |||
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| ||
|short_description=p3@TNFRSF1A | |||
}} | }} |
Latest revision as of 20:13, 19 September 2015
Short description: | p3@TNFRSF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TNFRSF1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538363, ENST00000543048, ENST00000543995_5end |
EntrezGene: | TNFRSF1A |
HGNC: | 11916 |
UniProt: | F5H4T5F5H7N1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.07e-12 | 48 |
phagocyte | 8.07e-12 | 48 |
classical monocyte | 2.76e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.76e-11 | 42 |
monopoietic cell | 4.22e-11 | 59 |
monocyte | 4.22e-11 | 59 |
monoblast | 4.22e-11 | 59 |
promonocyte | 4.22e-11 | 59 |
macrophage dendritic cell progenitor | 8.33e-11 | 61 |
myeloid leukocyte | 2.92e-09 | 72 |
mesodermal cell | 8.47e-09 | 121 |
muscle precursor cell | 1.11e-08 | 58 |
myoblast | 1.11e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.11e-08 | 58 |
muscle cell | 7.86e-08 | 55 |
granulocyte monocyte progenitor cell | 1.55e-07 | 67 |
multi fate stem cell | 6.83e-07 | 427 |
myeloid lineage restricted progenitor cell | 8.94e-07 | 66 |