FFCP PHASE1:Hg19::chr12:6451186..6451216,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7132 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11916 | |||
|TSSclassifier=strong | |||
|UniProt=F5H6Z2,F5H061 | |||
|association_with_transcript=0bp_to_ENST00000535958,ENST00000536194,ENST00000540022_5end | |||
|cluster_id=chr12:6451186..6451216,- | |||
|description=CAGE_peak_2_at_TNFRSF1A_5end | |||
|id=chr12:6451186..6451216,- | |||
|ontology_enrichment_celltype=CL:0002371!5.04e-17!591;CL:0000144!4.13e-16!625;CL:0002057!1.06e-13!42;CL:0000860!9.57e-13!45;CL:0002194!7.92e-12!63;CL:0000576!7.92e-12!63;CL:0000040!7.92e-12!63;CL:0000559!7.92e-12!63;CL:0000048!3.57e-11!430;CL:0002009!3.63e-11!65;CL:0000548!3.96e-11!679;CL:0000004!3.96e-11!679;CL:0000255!3.96e-11!679;CL:0000723!5.26e-11!436;CL:0000055!5.58e-11!180;CL:0000012!7.88e-11!682;CL:0000183!1.83e-10!59;CL:0000766!3.38e-10!76;CL:0000222!5.86e-10!119;CL:0000034!1.53e-09!444;CL:0000680!1.96e-09!57;CL:0000056!1.96e-09!57;CL:0000355!1.96e-09!57;CL:0000187!3.89e-09!54;CL:0000057!8.55e-09!75;CL:0000557!7.04e-08!71;CL:0000839!2.63e-07!70;CL:0000003!3.41e-07!722;CL:0002320!4.38e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-16;33!CL:0002057;1.48e-16;33!CL:0000473;2.18e-14;39!CL:0000234;2.18e-14;39!CL:0000576;1.02e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.15e-14,48;CL:0000234,1.15e-14,48;CL:0000860,1.06e-13,42;CL:0002057,1.06e-13,42;CL:0002194,1.62e-12,59;CL:0000576,1.62e-12,59;CL:0000040,1.62e-12,59;CL:0000559,1.62e-12,59;CL:0002009,8.61e-12,61;CL:0000048,1.44e-11,427;CL:0000723,2.08e-11,433;CL:0000766,1.14e-10,72;CL:0000222,3.35e-10,121;CL:0000034,6.55e-10,441;CL:0000680,7.41e-10,58;CL:0000056,7.41e-10,58;CL:0000355,7.41e-10,58;CL:0000187,1.46e-09,55;CL:0000057,8.54e-09,76;CL:0000557,2.93e-08,67;CL:0000839,1.16e-07,66;CL:0002320,3.56e-07,361;CL:0000192,4.09e-07,43;CL:0000514,4.09e-07,43;CL:0000393,9.73e-07,61;CL:0000211,9.73e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.69e-18!448;UBERON:0004120!1.69e-18!448;UBERON:0006603!1.69e-18!448;UBERON:0002204!6.98e-17!167;UBERON:0003081!9.59e-14!216;UBERON:0000468!6.55e-12!659;UBERON:0000467!9.19e-11!625;UBERON:0005256!1.42e-10!143;UBERON:0000480!1.92e-10!626;UBERON:0002405!3.97e-10!115;UBERON:0000486!1.23e-09!82;UBERON:0000923!3.30e-09!604;UBERON:0005291!3.30e-09!604;UBERON:0006598!3.30e-09!604;UBERON:0002532!3.30e-09!604;UBERON:0002050!3.77e-09!605;UBERON:0005423!3.77e-09!605;UBERON:0002100!3.83e-09!216;UBERON:0002371!4.25e-09!80;UBERON:0002385!6.94e-09!63;UBERON:0001015!6.94e-09!63;UBERON:0000383!6.94e-09!63;UBERON:0004290!6.96e-09!70;UBERON:0001134!8.70e-09!61;UBERON:0002036!8.70e-09!61;UBERON:0003082!8.70e-09!61;UBERON:0002193!1.15e-08!112;UBERON:0000914!1.79e-08!83;UBERON:0002329!1.79e-08!83;UBERON:0003077!1.79e-08!83;UBERON:0003059!1.79e-08!83;UBERON:0007282!1.79e-08!83;UBERON:0009618!1.79e-08!83;UBERON:0007285!1.79e-08!83;UBERON:0000922!5.14e-08!612;UBERON:0002390!6.42e-08!102;UBERON:0003061!6.42e-08!102;UBERON:0001474!1.68e-07!86;UBERON:0004765!1.72e-07!101;UBERON:0001434!1.72e-07!101;UBERON:0000479!3.13e-07!787;UBERON:0002384!5.37e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.41e-21,315;UBERON:0004120,8.41e-21,315;UBERON:0006603,8.41e-21,315;UBERON:0002204,5.79e-19,167;UBERON:0003081,1.59e-13,203;UBERON:0005256,9.39e-11,122;UBERON:0003104,2.06e-10,160;UBERON:0009142,2.06e-10,160;UBERON:0007503,3.25e-10,78;UBERON:0000486,5.09e-10,83;UBERON:0002371,1.71e-09,76;UBERON:0002385,2.76e-09,64;UBERON:0001015,2.76e-09,64;UBERON:0000383,2.76e-09,64;UBERON:0002329,2.84e-09,71;UBERON:0003059,2.84e-09,71;UBERON:0007282,2.84e-09,71;UBERON:0004290,2.84e-09,71;UBERON:0009618,2.84e-09,71;UBERON:0001134,3.44e-09,62;UBERON:0002036,3.44e-09,62;UBERON:0003082,3.44e-09,62;UBERON:0002100,4.44e-09,199;UBERON:0004765,6.06e-09,90;UBERON:0002193,6.21e-09,108;UBERON:0007524,7.24e-09,73;UBERON:0001434,8.42e-09,100;UBERON:0003077,8.56e-09,72;UBERON:0007285,8.56e-09,72;UBERON:0000923,8.94e-09,560;UBERON:0010316,8.94e-09,560;UBERON:0005291,8.94e-09,560;UBERON:0006598,8.94e-09,560;UBERON:0010317,8.94e-09,560;UBERON:0002532,8.94e-09,560;UBERON:0002405,1.39e-08,93;UBERON:0002050,2.08e-08,564;UBERON:0005423,2.92e-08,581;UBERON:0002390,3.46e-08,98;UBERON:0003061,3.46e-08,98;UBERON:0001474,8.53e-08,82;UBERON:0000922,2.62e-07,592;UBERON:0000479,2.88e-07,773;UBERON:0002384,4.40e-07,371;UBERON:0000490,5.64e-07,148 | |||
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| |||
|short_description=p2@TNFRSF1A | |||
}} |
Latest revision as of 20:14, 19 September 2015
Short description: | p2@TNFRSF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TNFRSF1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000535958, ENST00000536194, ENST00000540022_5end |
EntrezGene: | TNFRSF1A |
HGNC: | 11916 |
UniProt: | F5H6Z2F5H061 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.15e-14 | 48 |
phagocyte | 1.15e-14 | 48 |
classical monocyte | 1.06e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.06e-13 | 42 |
monopoietic cell | 1.62e-12 | 59 |
monocyte | 1.62e-12 | 59 |
monoblast | 1.62e-12 | 59 |
promonocyte | 1.62e-12 | 59 |
macrophage dendritic cell progenitor | 8.61e-12 | 61 |
multi fate stem cell | 1.44e-11 | 427 |
somatic stem cell | 2.08e-11 | 433 |
myeloid leukocyte | 1.14e-10 | 72 |
mesodermal cell | 3.35e-10 | 121 |
stem cell | 6.55e-10 | 441 |
muscle precursor cell | 7.41e-10 | 58 |
myoblast | 7.41e-10 | 58 |
multi-potent skeletal muscle stem cell | 7.41e-10 | 58 |
muscle cell | 1.46e-09 | 55 |
fibroblast | 8.54e-09 | 76 |
granulocyte monocyte progenitor cell | 2.93e-08 | 67 |
myeloid lineage restricted progenitor cell | 1.16e-07 | 66 |
connective tissue cell | 3.56e-07 | 361 |
smooth muscle cell | 4.09e-07 | 43 |
smooth muscle myoblast | 4.09e-07 | 43 |
electrically responsive cell | 9.73e-07 | 61 |
electrically active cell | 9.73e-07 | 61 |