FFCP PHASE1:Hg19::chr2:209130775..209130786,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:209130775..209130786,+
|short_description=p4@PIKFYVE
|description=CAGE_peak_4_at_PIKFYVE_5end
|association_with_transcript=-204bp_to_ENST00000264380,ENST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=200576 | |EntrezGene=200576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23785 | |HGNC=23785 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2I7,E7EQQ9,F8WEZ0,Q08AR7,Q6ZS32 | |UniProt=Q9Y2I7,E7EQQ9,F8WEZ0,Q08AR7,Q6ZS32 | ||
|association_with_transcript=-204bp_to_ENST00000264380,ENST00000392200,ENST00000392202,ENST00000443896,NM_001178000,NM_015040,NM_152671,uc002vcv.2,uc002vcw.2,uc002vcx.2,uc002vcy.1,uc002vcz.2,uc010fun.1_5end | |||
|cluster_id=chr2:209130775..209130786,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_PIKFYVE_5end | |||
|id=chr2:209130775..209130786,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.84e-14;1!CL:0000860;6.34e-13;33!CL:0002057;6.34e-13;33!CL:0000473;7.95e-12;39!CL:0000234;7.95e-12;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.07e-14,1;CL:0000860,4.90e-11,42;CL:0002057,4.90e-11,42;CL:0000473,1.28e-09,48;CL:0000234,1.28e-09,48;CL:0002194,1.26e-07,59;CL:0000576,1.26e-07,59;CL:0000040,1.26e-07,59;CL:0000559,1.26e-07,59;CL:0002009,2.28e-07,61;CL:0000839,8.59e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.05e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.46e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.08e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.08e-08,8 | |||
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| ||
|short_description=p4@PIKFYVE | |||
}} | }} |
Latest revision as of 20:21, 19 September 2015
Short description: | p4@PIKFYVE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PIKFYVE_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -204bp_to_ENST00000264380, ENST00000392200, ENST00000392202, ENST00000443896, NM_001178000, NM_015040, NM_152671, uc002vcv.2, uc002vcw.2, uc002vcx.2, uc002vcy.1, uc002vcz.2, uc010fun.1_5end |
EntrezGene: | PIKFYVE |
HGNC: | 23785 |
UniProt: | Q9Y2I7E7EQQ9F8WEZ0Q08AR7Q6ZS32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.07e-14 | 1 |
classical monocyte | 4.90e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.90e-11 | 42 |
defensive cell | 1.28e-09 | 48 |
phagocyte | 1.28e-09 | 48 |
monopoietic cell | 1.26e-07 | 59 |
monocyte | 1.26e-07 | 59 |
monoblast | 1.26e-07 | 59 |
promonocyte | 1.26e-07 | 59 |
macrophage dendritic cell progenitor | 2.28e-07 | 61 |
myeloid lineage restricted progenitor cell | 8.59e-07 | 66 |
Ontology term | p-value | n |
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testis | 9.08e-08 | 8 |