FFCP PHASE1:Hg19::chrX:148561600..148561610,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:148561600..148561610,-
|short_description=p36@IDS
|description=CAGE_peak_36_at_IDS_5end
|association_with_transcript=435bp_to_AL117536_5end
|EntrezGene=34...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3423 | |EntrezGene=3423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5389 | |HGNC=5389 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=435bp_to_AL117536_5end | |||
|cluster_id=chrX:148561600..148561610,- | |||
|description=CAGE_peak_36_at_IDS_5end | |||
|id=chrX:148561600..148561610,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002231;3.89e-23;3!CL:0000047;7.97e-10;2!CL:0000214;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.29e-23,3;CL:0000214,6.88e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.71e-17!22;UBERON:0002020!8.11e-17!34;UBERON:0003528!8.11e-17!34;UBERON:0001869!2.36e-16!32;UBERON:0001893!5.02e-15!34;UBERON:0000956!8.10e-15!25;UBERON:0000203!8.10e-15!25;UBERON:0001950!1.01e-14!20;UBERON:0002791!2.48e-14!33;UBERON:0001049!5.19e-14!57;UBERON:0005068!5.19e-14!57;UBERON:0006241!5.19e-14!57;UBERON:0007135!5.19e-14!57;UBERON:0002780!6.73e-14!41;UBERON:0001890!6.73e-14!41;UBERON:0006240!6.73e-14!41;UBERON:0003080!2.09e-13!42;UBERON:0002616!3.00e-13!59;UBERON:0000955!1.07e-11!69;UBERON:0006238!1.07e-11!69;UBERON:0001017!3.79e-11!82;UBERON:0005743!4.50e-11!86;UBERON:0000073!7.68e-10!94;UBERON:0001016!7.68e-10!94;UBERON:0001871!2.68e-09!7;UBERON:0003056!7.79e-09!61;UBERON:0003075!1.16e-08!86;UBERON:0007284!1.16e-08!86;UBERON:0000349!1.99e-08!5;UBERON:0002346!6.51e-08!90;UBERON:0000033!9.22e-08!123;UBERON:0007023!2.93e-07!115;UBERON:0000153!5.85e-07!129;UBERON:0007811!5.85e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;3.93e-34;2!UBERON:0003022;3.93e-34;2!UBERON:0002421;3.93e-34;2!UBERON:0002600;3.93e-34;2!UBERON:0000349;2.22e-30;5!UBERON:0002619;7.56e-12;22!UBERON:0000956;1.62e-10;25!UBERON:0000203;1.62e-10;25!UBERON:0001871;2.24e-10;6!UBERON:0002771;1.44e-09;2!UBERON:0001876;1.44e-09;2!UBERON:0003528;2.38e-07;34!UBERON:0002020;2.38e-07;34!UBERON:0002791;3.32e-07;32!UBERON:0001869;3.32e-07;32!UBERON:0002367;5.39e-07;11!UBERON:0010147;5.39e-07;11!UBERON:0006915;8.62e-07;3!UBERON:0007616;8.62e-07;3!UBERON:0002217;8.62e-07;3!UBERON:0002018;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,3.06e-34,2;UBERON:0003022,3.06e-34,2;UBERON:0002421,3.06e-34,2;UBERON:0002600,3.06e-34,2;UBERON:0000349,2.59e-30,5;UBERON:0002619,7.89e-12,22;UBERON:0000956,1.68e-10,25;UBERON:0000203,1.68e-10,25;UBERON:0001871,2.58e-10,6;UBERON:0002771,1.44e-09,2;UBERON:0001876,1.86e-09,2;UBERON:0002791,2.48e-08,32;UBERON:0001869,2.48e-08,32;UBERON:0003528,7.19e-08,34;UBERON:0002020,7.19e-08,34;UBERON:0001893,7.19e-08,34;UBERON:0002367,5.15e-07,11;UBERON:0010147,5.15e-07,11;UBERON:0009846,5.15e-07,11;UBERON:0003353,5.15e-07,11;UBERON:0004902,5.15e-07,11;UBERON:0003820,5.15e-07,11;UBERON:0009847,5.15e-07,11;UBERON:0006915,6.88e-07,3;UBERON:0007616,6.88e-07,3;UBERON:0002217,6.88e-07,3;UBERON:0002018,6.88e-07,3 | |||
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| ||
|short_description=p36@IDS | |||
}} | }} |
Latest revision as of 20:54, 19 September 2015
Short description: | p36@IDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_IDS_5end |
Coexpression cluster: | NA |
Association with transcript: | 435bp_to_AL117536_5end |
EntrezGene: | IDS |
HGNC: | 5389 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.29e-23 | 3 |
synovial cell | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 3.06e-34 | 2 |
lobe parts of cerebral cortex | 3.06e-34 | 2 |
hippocampal formation | 3.06e-34 | 2 |
limbic lobe | 3.06e-34 | 2 |
limbic system | 2.59e-30 | 5 |
regional part of cerebral cortex | 7.89e-12 | 22 |
cerebral cortex | 1.68e-10 | 25 |
pallium | 1.68e-10 | 25 |
temporal lobe | 2.58e-10 | 6 |
middle temporal gyrus | 1.44e-09 | 2 |
amygdala | 1.86e-09 | 2 |
regional part of telencephalon | 2.48e-08 | 32 |
cerebral hemisphere | 2.48e-08 | 32 |
brain grey matter | 7.19e-08 | 34 |
gray matter | 7.19e-08 | 34 |
telencephalon | 7.19e-08 | 34 |
prostate gland | 5.15e-07 | 11 |
male accessory sex gland | 5.15e-07 | 11 |
embryonic cloacal epithelium | 5.15e-07 | 11 |
epithelium of hindgut | 5.15e-07 | 11 |
urogenital sinus epithelium | 5.15e-07 | 11 |
prostate bud | 5.15e-07 | 11 |
prostate field | 5.15e-07 | 11 |
stratified squamous epithelium | 6.88e-07 | 3 |
layer of synovial tissue | 6.88e-07 | 3 |
synovial joint | 6.88e-07 | 3 |
synovial membrane of synovial joint | 6.88e-07 | 3 |