FFCP PHASE1:Hg19::chr19:54876447..54876469,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3903 | |EntrezGene=3903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6477 | |HGNC=6477 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000484116_5end | |association_with_transcript=0bp_to_ENST00000484116_5end | ||
|cluster_id=chr19:54876447..54876469,- | |||
|coexpression_cluster_id=C1105 | |coexpression_cluster_id=C1105 | ||
|description=CAGE_peak_3_at_LAIR1_5end | |description=CAGE_peak_3_at_LAIR1_5end | ||
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|ontology_enrichment_celltype=CL:0000037!1.87e-71!172;CL:0000566!1.87e-71!172;CL:0002032!7.94e-67!165;CL:0000837!7.94e-67!165;CL:0000988!2.39e-66!182;CL:0000738!7.15e-61!140;CL:0002087!1.45e-54!119;CL:0002031!2.56e-54!124;CL:0000763!3.96e-45!112;CL:0000049!3.96e-45!112;CL:0000766!3.44e-40!76;CL:0000839!3.46e-37!70;CL:0000557!6.61e-36!71;CL:0002194!1.22e-33!63;CL:0000576!1.22e-33!63;CL:0000040!1.22e-33!63;CL:0000559!1.22e-33!63;CL:0002009!9.96e-32!65;CL:0002057!1.14e-31!42;CL:0000860!4.78e-28!45;CL:0000542!4.20e-18!53;CL:0000051!4.20e-18!53;CL:0000838!1.04e-17!52;CL:0000134!1.94e-11!358;CL:0000084!4.43e-11!25;CL:0000827!4.43e-11!25;CL:0002320!2.55e-10!365;CL:0000791!2.73e-09!18;CL:0000789!2.73e-09!18;CL:0002420!2.73e-09!18;CL:0002419!2.73e-09!18;CL:0000790!2.73e-09!18;CL:0000236!1.49e-08!14;CL:0002393!2.65e-08!9;CL:0002397!2.65e-08!9;CL:0000219!4.72e-07!390 | |ontology_enrichment_celltype=CL:0000037!1.87e-71!172;CL:0000566!1.87e-71!172;CL:0002032!7.94e-67!165;CL:0000837!7.94e-67!165;CL:0000988!2.39e-66!182;CL:0000738!7.15e-61!140;CL:0002087!1.45e-54!119;CL:0002031!2.56e-54!124;CL:0000763!3.96e-45!112;CL:0000049!3.96e-45!112;CL:0000766!3.44e-40!76;CL:0000839!3.46e-37!70;CL:0000557!6.61e-36!71;CL:0002194!1.22e-33!63;CL:0000576!1.22e-33!63;CL:0000040!1.22e-33!63;CL:0000559!1.22e-33!63;CL:0002009!9.96e-32!65;CL:0002057!1.14e-31!42;CL:0000860!4.78e-28!45;CL:0000542!4.20e-18!53;CL:0000051!4.20e-18!53;CL:0000838!1.04e-17!52;CL:0000134!1.94e-11!358;CL:0000084!4.43e-11!25;CL:0000827!4.43e-11!25;CL:0002320!2.55e-10!365;CL:0000791!2.73e-09!18;CL:0000789!2.73e-09!18;CL:0002420!2.73e-09!18;CL:0002419!2.73e-09!18;CL:0000790!2.73e-09!18;CL:0000236!1.49e-08!14;CL:0002393!2.65e-08!9;CL:0002397!2.65e-08!9;CL:0000219!4.72e-07!390 | ||
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|ontology_enrichment_development_v019=CL:0002057;1.97e-26;42!CL:0000049;5.48e-15;108!CL:0000051;1.14e-10;53!CL:0000790;1.46e-10;18 | |ontology_enrichment_development_v019=CL:0002057;1.97e-26;42!CL:0000049;5.48e-15;108!CL:0000051;1.14e-10;53!CL:0000790;1.46e-10;18 | ||
|ontology_enrichment_disease=DOID:1240!2.04e-11!39;DOID:2531!4.29e-10!51;DOID:0060083!4.29e-10!51;DOID:8692!8.16e-09!31 | |ontology_enrichment_disease=DOID:1240!2.04e-11!39;DOID:2531!4.29e-10!51;DOID:0060083!4.29e-10!51;DOID:8692!8.16e-09!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.67e-09;31!DOID:1240;2.59e-09;39 | |ontology_enrichment_disease_v019=DOID:8692;1.67e-09;31!DOID:1240;2.59e-09;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,9.02e-12,39;DOID:8692,5.72e-10,31;DOID:2531,5.45e-09,51;DOID:0060083,5.45e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.39e-42!102;UBERON:0003061!8.39e-42!102;UBERON:0002193!9.05e-37!112;UBERON:0002371!8.60e-32!80;UBERON:0001474!2.30e-28!86;UBERON:0002405!1.28e-24!115;UBERON:0007023!7.95e-22!115;UBERON:0004765!2.02e-20!101;UBERON:0001434!2.02e-20!101;UBERON:0002384!1.26e-09!375;UBERON:0000178!4.85e-08!15;UBERON:0000179!4.85e-08!15;UBERON:0000463!4.85e-08!15;UBERON:0001049!7.99e-08!57;UBERON:0005068!7.99e-08!57;UBERON:0006241!7.99e-08!57;UBERON:0007135!7.99e-08!57;UBERON:0003081!1.39e-07!216;UBERON:0003080!6.73e-07!42 | |ontology_enrichment_uberon=UBERON:0002390!8.39e-42!102;UBERON:0003061!8.39e-42!102;UBERON:0002193!9.05e-37!112;UBERON:0002371!8.60e-32!80;UBERON:0001474!2.30e-28!86;UBERON:0002405!1.28e-24!115;UBERON:0007023!7.95e-22!115;UBERON:0004765!2.02e-20!101;UBERON:0001434!2.02e-20!101;UBERON:0002384!1.26e-09!375;UBERON:0000178!4.85e-08!15;UBERON:0000179!4.85e-08!15;UBERON:0000463!4.85e-08!15;UBERON:0001049!7.99e-08!57;UBERON:0005068!7.99e-08!57;UBERON:0006241!7.99e-08!57;UBERON:0007135!7.99e-08!57;UBERON:0003081!1.39e-07!216;UBERON:0003080!6.73e-07!42 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.83e-48,98;UBERON:0003061,5.83e-48,98;UBERON:0002193,6.72e-43,108;UBERON:0002371,8.38e-39,76;UBERON:0002405,9.84e-37,93;UBERON:0001474,4.58e-35,82;UBERON:0004765,1.47e-29,90;UBERON:0001434,8.66e-25,100;UBERON:0007023,1.22e-14,114;UBERON:0002384,3.55e-12,371;UBERON:0003081,1.28e-11,203;UBERON:0002204,1.51e-07,167;UBERON:0001049,3.74e-07,56;UBERON:0005068,3.74e-07,56;UBERON:0006241,3.74e-07,56;UBERON:0007135,3.74e-07,56 | |||
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| ||
|short_description=p3@LAIR1 | |short_description=p3@LAIR1 | ||
}} | }} |
Latest revision as of 22:07, 19 September 2015
Short description: | p3@LAIR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LAIR1_5end |
Coexpression cluster: | C1105_CD14_CD19_acute_CD14CD16_CD4_Mast_granulocyte |
Association with transcript: | 0bp_to_ENST00000484116_5end |
EntrezGene: | LAIR1 |
HGNC: | 6477 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.83e-48 | 98 |
blood island | 5.83e-48 | 98 |
hemolymphoid system | 6.72e-43 | 108 |
bone marrow | 8.38e-39 | 76 |
immune system | 9.84e-37 | 93 |
bone element | 4.58e-35 | 82 |
skeletal element | 1.47e-29 | 90 |
skeletal system | 8.66e-25 | 100 |
adult organism | 1.22e-14 | 114 |
connective tissue | 3.55e-12 | 371 |
lateral plate mesoderm | 1.28e-11 | 203 |
musculoskeletal system | 1.51e-07 | 167 |
neural tube | 3.74e-07 | 56 |
neural rod | 3.74e-07 | 56 |
future spinal cord | 3.74e-07 | 56 |
neural keel | 3.74e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.02e-12 | 39 |
myeloid leukemia | 5.72e-10 | 31 |
hematologic cancer | 5.45e-09 | 51 |
immune system cancer | 5.45e-09 | 51 |