FFCP PHASE1:Hg19::chr9:113800994..113801032,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:113800994..113801032,-
|short_description=p3@LPAR1
|description=CAGE_peak_3_at_LPAR1_5end
|association_with_transcript=-13bp_to_ENST00000538760,uc011lwo.1_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1902 | |EntrezGene=1902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3166 | |HGNC=3166 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQ18 | |UniProt=B4DQ18 | ||
|association_with_transcript=-13bp_to_ENST00000538760,uc011lwo.1_5end | |||
|cluster_id=chr9:113800994..113801032,- | |||
|coexpression_cluster_id=C2016 | |||
|description=CAGE_peak_3_at_LPAR1_5end | |||
|id=chr9:113800994..113801032,- | |||
|ontology_enrichment_celltype=CL:0000055!2.36e-21!180;CL:0000057!1.03e-19!75;CL:0000680!8.31e-11!57;CL:0000056!8.31e-11!57;CL:0000355!8.31e-11!57;CL:0000187!7.67e-10!54;CL:0000183!4.12e-09!59;CL:0002620!8.08e-09!23;CL:0000192!1.58e-08!42;CL:0000514!1.58e-08!42;CL:0000393!3.60e-07!60;CL:0000211!3.60e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.42e-09;23!CL:0000057;3.51e-08;73!CL:0000192;8.09e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.07e-20,76;CL:0000680,1.10e-11,58;CL:0000056,1.10e-11,58;CL:0000355,1.10e-11,58;CL:0000187,1.18e-10,55;CL:0002620,2.74e-09,23;CL:0000192,3.70e-09,43;CL:0000514,3.70e-09,43;CL:0000393,7.91e-08,61;CL:0000211,7.91e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;8.09e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.02e-27!365;UBERON:0000914!1.70e-19!83;UBERON:0002329!1.70e-19!83;UBERON:0003077!1.70e-19!83;UBERON:0003059!1.70e-19!83;UBERON:0007282!1.70e-19!83;UBERON:0009618!1.70e-19!83;UBERON:0007285!1.70e-19!83;UBERON:0000468!3.83e-17!659;UBERON:0003102!4.77e-17!95;UBERON:0000481!5.23e-17!347;UBERON:0000486!6.65e-16!82;UBERON:0005256!1.26e-15!143;UBERON:0000467!8.22e-15!625;UBERON:0000480!1.53e-14!626;UBERON:0004290!3.62e-14!70;UBERON:0002100!2.30e-13!216;UBERON:0000119!6.75e-13!312;UBERON:0000483!2.39e-12!309;UBERON:0002385!6.66e-12!63;UBERON:0001015!6.66e-12!63;UBERON:0000383!6.66e-12!63;UBERON:0001134!1.55e-11!61;UBERON:0002036!1.55e-11!61;UBERON:0003082!1.55e-11!61;UBERON:0000062!2.27e-11!511;UBERON:0002050!2.76e-11!605;UBERON:0005423!2.76e-11!605;UBERON:0007023!3.09e-11!115;UBERON:0000923!3.12e-11!604;UBERON:0005291!3.12e-11!604;UBERON:0006598!3.12e-11!604;UBERON:0002532!3.12e-11!604;UBERON:0000922!5.60e-11!612;UBERON:0000479!2.11e-10!787;UBERON:0000477!2.64e-10!286;UBERON:0000033!3.97e-10!123;UBERON:0000153!2.72e-09!129;UBERON:0007811!2.72e-09!129;UBERON:0004111!1.90e-08!241;UBERON:0003104!9.38e-08!238;UBERON:0009142!9.38e-08!238;UBERON:0004121!1.07e-07!169;UBERON:0000161!2.28e-07!35;UBERON:0001049!2.47e-07!57;UBERON:0005068!2.47e-07!57;UBERON:0006241!2.47e-07!57;UBERON:0007135!2.47e-07!57;UBERON:0002199!2.76e-07!45;UBERON:0002416!2.76e-07!45;UBERON:0002616!3.38e-07!59;UBERON:0000924!3.92e-07!173;UBERON:0006601!3.92e-07!173;UBERON:0000075!4.50e-07!13;UBERON:0005944!4.50e-07!13;UBERON:0004288!4.50e-07!13;UBERON:0003089!4.50e-07!13;UBERON:0000165!8.76e-07!28;UBERON:0000930!8.76e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000075;2.08e-09;16!UBERON:0002204;4.18e-07;70!UBERON:0000165;6.86e-07;28!UBERON:0002384;7.17e-07;198!UBERON:0002385;7.51e-07;31!UBERON:0001015;7.51e-07;31!UBERON:0000383;7.51e-07;31 | |||
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| ||
|short_description=p3@LPAR1 | |||
}} | }} |
Latest revision as of 04:03, 20 September 2015
Short description: | p3@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LPAR1_5end |
Coexpression cluster: | C2016_Fibroblast_corpus_Nucleus_Anulus_globus_tridermal_Synoviocyte |
Association with transcript: | -13bp_to_ENST00000538760, uc011lwo.1_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | B4DQ18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.07e-20 | 76 |
muscle precursor cell | 1.10e-11 | 58 |
myoblast | 1.10e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.10e-11 | 58 |
muscle cell | 1.18e-10 | 55 |
skin fibroblast | 2.74e-09 | 23 |
smooth muscle cell | 3.70e-09 | 43 |
smooth muscle myoblast | 3.70e-09 | 43 |
electrically responsive cell | 7.91e-08 | 61 |
electrically active cell | 7.91e-08 | 61 |