FFCP PHASE1:Hg19::chrX:154563889..154563966,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:154563889..154563966,- to FFCP PHASE1:Hg19::chrX:154563889..154563966,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1193 | |EntrezGene=1193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2063 | |HGNC=2063 | ||
|TSSclassifier=strong | |||
|UniProt=A6PVS0,O15247 | |UniProt=A6PVS0,O15247 | ||
|association_with_transcript=0bp_to_ENST00000321926,ENST00000369449_5end | |||
|cluster_id=chrX:154563889..154563966,- | |||
|coexpression_cluster_id=C2958 | |||
|description=CAGE_peak_1_at_CLIC2_5end | |||
|id=chrX:154563889..154563966,- | |||
|ontology_enrichment_celltype=CL:0000839!1.18e-24!70;CL:0000763!2.74e-24!112;CL:0000049!2.74e-24!112;CL:0000557!3.61e-24!71;CL:0002009!1.54e-21!65;CL:0000766!1.15e-20!76;CL:0002194!1.19e-20!63;CL:0000576!1.19e-20!63;CL:0000040!1.19e-20!63;CL:0000559!1.19e-20!63;CL:0002057!1.77e-20!42;CL:0000860!1.31e-17!45;CL:0000037!1.09e-14!172;CL:0000566!1.09e-14!172;CL:0002032!1.64e-13!165;CL:0000837!1.64e-13!165;CL:0000988!1.55e-12!182;CL:0000738!5.31e-12!140;CL:0002031!5.99e-12!124;CL:0002087!5.19e-09!119;CL:0000451!1.78e-07!10;CL:0000990!5.21e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;3.01e-18;39!CL:0000234;3.01e-18;39!CL:0000860;2.06e-17;33!CL:0002057;2.06e-17;33!CL:0000576;1.54e-15;48!CL:0000766;9.65e-13;69!CL:0000763;9.38e-10;100!CL:0000451;1.43e-08;10!CL:0000990;4.75e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.36e-34,108;CL:0000049,1.36e-34,108;CL:0000839,2.92e-34,66;CL:0000557,1.46e-33,67;CL:0002009,2.37e-30,61;CL:0002194,2.91e-29,59;CL:0000576,2.91e-29,59;CL:0000040,2.91e-29,59;CL:0000559,2.91e-29,59;CL:0000766,1.02e-28,72;CL:0000473,1.28e-28,48;CL:0000234,1.28e-28,48;CL:0000860,4.88e-24,42;CL:0002057,4.88e-24,42;CL:0000037,1.27e-21,168;CL:0002032,5.36e-20,161;CL:0000837,5.36e-20,161;CL:0000988,4.43e-19,177;CL:0000738,5.70e-17,136;CL:0002031,7.44e-17,120;CL:0002087,4.74e-13,115;CL:0000451,1.37e-08,10;CL:0000990,4.88e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-17;42!CL:0000049;1.41e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.02e-33!115;UBERON:0002193!2.00e-30!112;UBERON:0002390!3.03e-29!102;UBERON:0003061!3.03e-29!102;UBERON:0002371!1.10e-23!80;UBERON:0002405!1.58e-20!115;UBERON:0001474!2.01e-20!86;UBERON:0004765!1.57e-15!101;UBERON:0001434!1.57e-15!101;UBERON:0003081!7.53e-12!216;UBERON:0000479!4.50e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.99e-08;114!UBERON:0002390;3.88e-07;32!UBERON:0002193;8.91e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.23e-41,108;UBERON:0002390,1.13e-39,98;UBERON:0003061,1.13e-39,98;UBERON:0002405,7.64e-36,93;UBERON:0002371,4.23e-33,76;UBERON:0007023,3.79e-32,114;UBERON:0001474,2.12e-29,82;UBERON:0004765,3.01e-24,90;UBERON:0001434,1.95e-21,100;UBERON:0003081,2.45e-20,203;UBERON:0000926,1.40e-12,315;UBERON:0004120,1.40e-12,315;UBERON:0006603,1.40e-12,315;UBERON:0002204,2.64e-08,167;UBERON:0000479,8.66e-08,773 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0.893922188854576,0,0,1.26343974685366,1.30592814099919,0,0,0,0,0.37129905888014,0,2.01697543935533,0,0,0,0,0,0,0,0,0,6.265899271332,5.41863890369642,6.29686250509434,1.96682138424452,3.45446458287491,2.16742572642506,0,0,0,0.0774672005803016,0.568676929949686,18.2032272387605,8.30993112797816,7.2196001089251,4.77423915574874,105.240272892764,88.4229708231814,107.409011703456,6.97911546141911,10.9584023669755,3.39617685662943,10.6917356976615,11.1015329765893,8.3620720141678,11.2200033005639,14.6011602721587,9.93225365532058,16.5477926753577,21.9464792418501,10.8341189275473,7.15320890261898,17.73889975376,10.562003768919,16.5285301880287,24.3906060577831,15.344091019177,10.2253903057882,17.7522655283252,5.96714650745772,29.6013423401156,24.397564661719,17.4390229718761,9.2962006144995,18.251902144707,10.8594422352558,31.4807741369352,48.9809255863461,38.291948880347,30.6320165152316,18.9217826968889,18.0306435137203,4.6054738770063,6.30742949934327,4.98249318760948,11.4005097496499,10.94041724595,10.0465284570549,0,0.546138611262131,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,27.7559790015954,26.9044110231137,10.0085952214529,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,1.80690142893327,1.02389288923535,0,0.236777252044017,0,0,0,0,2.43806866313962,0,0.383587685530591,0,0,0.724232594804119,2.3858578411533,0,0,0,0,4.78073625566651,0,0,150.265443262118,148.880925390873,92.8046564421679,4.5313218618015,7.43593384014166,4.82894751728434,3.7764857399674,0,0.694281003215189,0.56530794192401,1.67799774483962,0.275118041940067,0,0.258416759169329,15.6537155582153,1.67360306382335,3.22263453687318,4.56163263431108,5.36936526605973,1.83831540172934,0,3.39338967479503,2.2452937262617,4.0540132973996,0,0,0.366403487860815,0,0,0,0,0.886413581652058,0.529636723252875,2.58152958673932,1.77334191099179,0,0,0,1.55605517699883,0.134710672069688,0.326923806226917,0.151357427644931,0,0,0.936480230490962,0.570471821544449,1.04614076386261,0,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0.213557388818567,0.635795703478686,0,0.103052529238439,0,0,0,0,0.252433774244115,0.368199594569197,0.646584227275248,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0.982827216677626,11.2250082269467,0,0,0,0.109750285408626,0,0.100528972411631,0,0.325808305310325,0,0,0,0,5.05282567163758,7.87075371380238,12.5567740474835,0,0,29.5460407304877,22.9324179836453,23.6323548039078,0,0,0,0,0,0,16.2578868505661,4.93071230474066,20.5254834385364,35.0211486803216,24.8697593849969,0,0,0,0,0,0,0,0.336393253036082,0,0.22001485746285,0.129271715757778,0,0.845302752556,3.98907174877306,3.12022310734098,0,0,0,0,0,0,1.62868092146868,0,0,0.301439377059586,0,0,26.7572317410619,27.1218829373348,37.9501091069457,0,0,0,0.434343920002738,0,0,0,3.15249216323084,0.431255149719035,1.54011643535698,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0.24538298343828,0,0,0,0,0,0,1.50473049863859,2.27407504055985,2.0694614258501,0,0,0.173767228936166,0,0,4.13536052245775,3.45142721309787,4.37582986994122,2.12189300012382,0,0,2.23297027036899,0,0.280660094433074,1.02511319404561,2.04682899626681,0,0,0.462629081407967,0.532685175939381,1.06765302817952,0,0.464841513839837,0,0,0,0.229628896329213,0.728364672026868,1.70461739447251,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,164.664167361097,140.129401749347,0,0,0,33.9004928321006,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,1.28904293841928,0.725083469571143,1.36362603865761,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,1.48863347743867,0,0,0,0,0,0,0.179872457583315,1.09814811894422,0.706874414074119,0,0,0,0,0,0,0.409499734223957,0.424216295861138,0,0,0,0,0,0.655894752046633,0,2.16876448669825,0,0,0,0,6.74046021734136,8.02209014131124,4.28083360847872,0,0,0,0,0,40.0111153301311,0,0,0,0,27.9096185077693,25.2330278356984,18.7983571767474,7.86164859010704,11.1067813733272,12.9694662238543,16.7409745543816,25.3800056414167,0,0,0,0,0,0,0,0,0,21.1673582723883,0,22.1829770709632,0,0,25.0634477090067,0,0,0,0,0,0,0,0,0,7.79537286906679,8.61611792633986,9.19549306818343,0,9.86909035614947,0,36.7735529972454,0,12.7045458076325,0,3.58116727106535,2.37571744666111,7.06469614828234,0.994147647766298,4.78276015795743,0.111308705022906,0,0,8.16916751829386,11.0513566212459,0,0,1.10776324914963,0,0.0898683511473268,0,0,17.7558130146481,2.3948309234694,2.22273980289274,0,2.87581104301739,0,0,0.0874599999961957,30.4499821682613,0.1137934482855,0.254253650292766,0,0,2.91604613383254,0.173624994933292,0.885741385813839,5.78862905401958,3.05163472634166,3.75969483766164,0.295547618953547,4.16832254592548,0,2.37020365273626,24.7010329797189,0.91153644677601,0,0,0,4.46601623624687,1.4655614944298,13.3258694004659,0,6.27921025580099,18.6157083728175,59.782850063552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| 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| ||
|short_description=p1@CLIC2 | |||
}} | }} |
Latest revision as of 04:50, 20 September 2015
Short description: | p1@CLIC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLIC2_5end |
Coexpression cluster: | C2958_migratory_Reticulocytes_Dendritic_CD14_vagina_thyroid_splenic |
Association with transcript: | 0bp_to_ENST00000321926, ENST00000369449_5end |
EntrezGene: | CLIC2 |
HGNC: | 2063 |
UniProt: | A6PVS0O15247 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.36e-34 | 108 |
common myeloid progenitor | 1.36e-34 | 108 |
myeloid lineage restricted progenitor cell | 2.92e-34 | 66 |
granulocyte monocyte progenitor cell | 1.46e-33 | 67 |
macrophage dendritic cell progenitor | 2.37e-30 | 61 |
monopoietic cell | 2.91e-29 | 59 |
monocyte | 2.91e-29 | 59 |
monoblast | 2.91e-29 | 59 |
promonocyte | 2.91e-29 | 59 |
myeloid leukocyte | 1.02e-28 | 72 |
defensive cell | 1.28e-28 | 48 |
phagocyte | 1.28e-28 | 48 |
classical monocyte | 4.88e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.88e-24 | 42 |
hematopoietic stem cell | 1.27e-21 | 168 |
hematopoietic oligopotent progenitor cell | 5.36e-20 | 161 |
hematopoietic multipotent progenitor cell | 5.36e-20 | 161 |
hematopoietic cell | 4.43e-19 | 177 |
leukocyte | 5.70e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 7.44e-17 | 120 |
nongranular leukocyte | 4.74e-13 | 115 |
dendritic cell | 1.37e-08 | 10 |
conventional dendritic cell | 4.88e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.23e-41 | 108 |
hematopoietic system | 1.13e-39 | 98 |
blood island | 1.13e-39 | 98 |
immune system | 7.64e-36 | 93 |
bone marrow | 4.23e-33 | 76 |
adult organism | 3.79e-32 | 114 |
bone element | 2.12e-29 | 82 |
skeletal element | 3.01e-24 | 90 |
skeletal system | 1.95e-21 | 100 |
lateral plate mesoderm | 2.45e-20 | 203 |
mesoderm | 1.40e-12 | 315 |
mesoderm-derived structure | 1.40e-12 | 315 |
presumptive mesoderm | 1.40e-12 | 315 |
musculoskeletal system | 2.64e-08 | 167 |
tissue | 8.66e-08 | 773 |