FFCP PHASE1:Hg19::chr16:10971094..10971117,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4261 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7067 | |||
|TSSclassifier=strong | |||
|UniProt=F2Z2G8 | |||
|association_with_transcript=21bp_to_ENST00000388910_5end | |||
|cluster_id=chr16:10971094..10971117,+ | |||
|coexpression_cluster_id=C1207 | |||
|description=CAGE_peak_3_at_CIITA_5end | |||
|id=chr16:10971094..10971117,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.26e-48!140;CL:0002087!1.17e-44!119;CL:0000037!2.48e-44!172;CL:0000566!2.48e-44!172;CL:0000988!1.46e-43!182;CL:0002031!1.17e-40!124;CL:0002032!1.18e-39!165;CL:0000837!1.18e-39!165;CL:0002009!2.72e-31!65;CL:0000557!5.64e-30!71;CL:0002194!1.69e-29!63;CL:0000576!1.69e-29!63;CL:0000040!1.69e-29!63;CL:0000559!1.69e-29!63;CL:0002057!1.89e-26!42;CL:0000839!6.33e-26!70;CL:0000766!8.58e-26!76;CL:0000763!5.58e-25!112;CL:0000049!5.58e-25!112;CL:0000860!1.82e-23!45;CL:0000945!7.82e-18!24;CL:0000826!7.82e-18!24;CL:0000542!3.66e-13!53;CL:0000051!3.66e-13!53;CL:0000838!1.00e-12!52;CL:0000236!1.35e-12!14;CL:0000451!4.04e-11!10;CL:0000990!1.65e-09!8;CL:0000840!9.18e-07!5;CL:0001029!9.18e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.16e-28;39!CL:0000234;1.16e-28;39!CL:0000860;2.41e-28;33!CL:0002057;2.41e-28;33!CL:0000945;9.56e-24;24!CL:0000576;9.63e-23;48!CL:0000236;5.76e-17;13!CL:0002087;4.82e-16;104!CL:0000738;1.24e-15;136!CL:0000766;1.31e-15;69!CL:0000451;1.55e-15;10!CL:0000990;3.61e-13;8!CL:0000542;4.28e-10;53!CL:0000840;3.64e-09;5!CL:0000988;4.33e-09;177!CL:0000763;7.13e-09;100!CL:0000453;2.21e-08;5!CL:0000235;4.55e-08;6!CL:0002393;1.02e-07;6!CL:0002397;1.02e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.93e-65,136;CL:0002087,5.90e-61,115;CL:0000037,3.21e-57,168;CL:0000988,3.55e-57,177;CL:0002031,2.15e-54,120;CL:0002032,1.41e-51,161;CL:0000837,1.41e-51,161;CL:0002009,1.75e-46,61;CL:0002194,8.48e-44,59;CL:0000576,8.48e-44,59;CL:0000040,8.48e-44,59;CL:0000559,8.48e-44,59;CL:0000557,8.11e-43,67;CL:0000473,2.96e-42,48;CL:0000234,2.96e-42,48;CL:0000766,1.06e-37,72;CL:0000839,2.90e-37,66;CL:0000860,1.32e-35,42;CL:0002057,1.32e-35,42;CL:0000763,6.22e-34,108;CL:0000049,6.22e-34,108;CL:0000945,1.11e-23,24;CL:0000826,1.11e-23,24;CL:0000236,1.06e-17,14;CL:0000451,1.54e-15,10;CL:0000542,2.74e-15,53;CL:0000051,2.74e-15,53;CL:0000838,1.10e-14,52;CL:0000990,3.50e-13,8;CL:0000134,6.77e-11,354;CL:0002320,3.55e-10,361;CL:0000840,3.52e-09,5;CL:0001029,3.52e-09,5;CL:0000219,7.56e-09,386;CL:0000453,2.23e-08,5;CL:0000235,4.88e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-25;42!CL:0000051;4.28e-10;53!CL:0000049;8.25e-10;108 | |||
|ontology_enrichment_disease=DOID:0060058!1.82e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;8.32e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,8.34e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.84e-40!102;UBERON:0003061!1.84e-40!102;UBERON:0002193!2.73e-36!112;UBERON:0007023!1.51e-29!115;UBERON:0002371!9.80e-29!80;UBERON:0001474!6.96e-25!86;UBERON:0002405!4.48e-20!115;UBERON:0004765!2.21e-19!101;UBERON:0001434!2.21e-19!101;UBERON:0001049!3.58e-13!57;UBERON:0005068!3.58e-13!57;UBERON:0006241!3.58e-13!57;UBERON:0007135!3.58e-13!57;UBERON:0000178!3.83e-10!15;UBERON:0000179!3.83e-10!15;UBERON:0000463!3.83e-10!15;UBERON:0002616!9.10e-10!59;UBERON:0003080!3.39e-09!42;UBERON:0003081!6.25e-09!216;UBERON:0002780!6.56e-09!41;UBERON:0001890!6.56e-09!41;UBERON:0006240!6.56e-09!41;UBERON:0001893!3.09e-08!34;UBERON:0002020!4.06e-08!34;UBERON:0003528!4.06e-08!34;UBERON:0002791!6.76e-08!33;UBERON:0003075!1.58e-07!86;UBERON:0007284!1.58e-07!86;UBERON:0001017!2.64e-07!82;UBERON:0001869!2.94e-07!32;UBERON:0000479!4.66e-07!787;UBERON:0000955!6.33e-07!69;UBERON:0006238!6.33e-07!69;UBERON:0005743!7.72e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.25e-14;15!UBERON:0000179;2.25e-14;15!UBERON:0000463;2.25e-14;15!UBERON:0002390;1.09e-11;32!UBERON:0002193;7.34e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.21e-54,98;UBERON:0003061,9.21e-54,98;UBERON:0002193,9.20e-50,108;UBERON:0002371,2.95e-37,76;UBERON:0002405,1.01e-36,93;UBERON:0001474,3.89e-33,82;UBERON:0004765,1.59e-28,90;UBERON:0001434,7.72e-24,100;UBERON:0003081,1.15e-17,203;UBERON:0000178,2.02e-14,15;UBERON:0000179,2.02e-14,15;UBERON:0000463,2.02e-14,15;UBERON:0007023,2.70e-12,114;UBERON:0002384,1.36e-09,371;UBERON:0002204,7.27e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.61560529038394,0.204000691244253,4.07491137921514,2.0036519099174,1.09499540058307,0.376627918784408,3.05653622991805,3.85872770414745,3.46327437780189,4.32700704533794,2.30297638858328,8.3600706590681,0,0,0,2.16908161624845,3.9807385096478,5.5784083473621,6.09394949385065,4.01088894940283,5.64228263861215,1.11957737119962,3.2389366601898,2.06060454107349,4.21654892460738,3.40088349319928,2.66842467306598,1.62700325833979,2.46700732813095,1.85823822537062,56.6754012874636,77.8728547848466,44.6951414489426,3.7922024881028,6.45484683583826,2.70852973188684,2.25890807451126,1.63743690034707,1.57306439111559,2.75475503133812,5.1348644332175,4.47535988059329,77.5150555438783,93.747919082167,88.6547481108004,0,1.13477044938228,1.24564449799115,50.7522303818621,62.056467292004,49.5190565927666,1.21079900526674,2.57794345191295,2.53169909952708,4.64761629886272,5.10250319916104,3.98351426465914,11.120534483503,8.40990599912435,5.6253955343978,0.285012743741249,0.39783335439818,1.64397738388171,21.1195493353587,19.1148513941746,24.9062591081795,16.2157484575273,14.8146515203325,22.9900975981793,17.1871666924064,18.1270213361719,21.630092826159,13.5064553555316,15.2909291250092,14.5388461436928,3.92355994087075,5.26768169550154,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,2.55977702432214,1.02389288923535,0,0.236777252044017,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,1.37528029272598,0,0,12.9818957461873,17.2388439926275,10.7695948020281,9.77811559651902,9.15191857248205,12.6295550452052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,11.8184162921951,3.04205544681009,12.7822799568306,0,0,0,0,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,5.02257091432126,6.32501818449095,0,0,0,0,0,0.179060963239896,0.112085143993527,2.56139988262505,0.646882724578552,1.41177339907723,0.254094624222463,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,5.99627275756373,3.66714141391649,6.19019835259977,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.328508624055237,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,1.41215701165169,0,0,0,0,4.05958087385735,4.58782324285425,4.5571774973933,6.19402616190251,4.52498500394814,3.24236655596359,3.7802200606668,4.75875105776562,0,0,0,1.85803175125719,1.87549976869378,0,0,1.39705560002972,2.2980644415884,0.635020748171649,0.324621940274555,3.65036331547496,3.42352018549788,0,0,0.846458889008016,0.642352300414798,1.61439765752838,2.55507742614196,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,11.2557818120253,0.568272293612826,0.23874448473769,0.296964680832639,0,0,0.703347082052564,0,3.79048910721547,0,2.39097585901284,10.2225048746525,0,0,4.30796819113743,0,0,0,0.511572370226872,0.295930216910801,0,0,0,1.02044907978036,0,0,0,0.724999575434793,0,0,0,0,0,0,1.77148277162768,1.08536794762867,0,0.221158519862449,0,0,0,0,0.692552326534174,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.0884575645033392,0,4.74433805888995,6.91958058100416,8.24933401093097,4.58327704268604,0.802577647298789,0,4.01400536274465,0,0,1.18375320854817,0,0,5.05492637027904,0,0,0,0,0,0,0,0.138674673013139,0,0,0,1.7472666824203,0,0,0,0,0.872901148395775,0,0,0.411125773940253,0.397429223405979,0.633107959558787,0,0,1.70762395791482,0,0,0,0,1.29649318189335,0,0.471388069233591,0,0,0,0,2.40168115483916,1.9166753044879,61.3183622721467,0,3.6804229599104,1.67569440763353,0.458320848023367,1.43574604915363,0.199679000498991,0.429226048136571,0.89268582976749,0.134366944973453,0,0,0,0,0,0,1.43944664511834,2.38568906942791,1.22583065500418,0,0,0,76.7160970190616,79.7016013194688,0.91124334987037,0,0.394028536495991,0.104909176269996,0,0,0,0,0,0,0,0,0.326587360109409,0,0.246277562248017,0,0,0,0,0.904980694530854,2.24795422962573,0,0,4.16470909014009,0.78602152549833,2.48543433208317,2.97699613087171,0.395223263795889,5.23708173037852,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,3.44045517414043,1.77486482458964,3.35320575883471,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,67.4216668584284,59.9220429813268,65.099026913826,0,0,0.211312123358627,4.59971010466339,0.106691729694141,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.770750701157514,1.41696576325585,0.798169295285756,0.41023272848151,0,0.760729777106397,0.645902582527404,0,0,0,0,0,0.381382095467167,0,0,0.376051641746286,0,0.781514011233092,0,0,0.147856086217045,1.08060135389431,1.56215619722769,0.826747186004736,1.26831620387814,0,1.09651553371436,2.97726707033577,0,0,0,0.672567444437648,0.606965604236632,0.455324382702595,0.620916591138472,2.18944576355981,0.342976018874837,0.951576261675644,1.11813715056843,0.118193840883968,0,0.863424021355654,0.628462359664008,0,2.73947616152849,0,0.47775168788705,0.78624198594322,0,0,0,0,0.207216164163037,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,3.04265724207253,0,0,0.821302454849976,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0.245148321753905,0,1.57046773691956,5.34683520588755,0.8453114551668,0,4.79317981697253,4.96325737396544,6.8959397588201,0,0,0.401206833445841,0.730336388246517,2.2936464170227,2.43677291357467,0,1.01987235286372,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,1.65833887891756,2.27552590896169,2.55880778281177,0.476128862927481,1.29177819672012,1.98639085746745,0,0.12729431655633,0.404234377916439,1.08858373948481,0,10.1028079521881,1.43444410785353,1.66330178273007,0,0.640364075266293,0,0.0898252021065869,0,0.488965776731466,0.406896178315738,0.665756774185513,7.24585656927694,1.28227396921293 | |||
|short_description=p3@CIITA | |||
}} |
Latest revision as of 04:59, 20 September 2015
Short description: | p3@CIITA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CIITA_5end |
Coexpression cluster: | C1207_migratory_granulocyte_CD19_CD14_immature_adult_Dendritic |
Association with transcript: | 21bp_to_ENST00000388910_5end |
EntrezGene: | CIITA |
HGNC: | 7067 |
UniProt: | F2Z2G8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.21e-54 | 98 |
blood island | 9.21e-54 | 98 |
hemolymphoid system | 9.20e-50 | 108 |
bone marrow | 2.95e-37 | 76 |
immune system | 1.01e-36 | 93 |
bone element | 3.89e-33 | 82 |
skeletal element | 1.59e-28 | 90 |
skeletal system | 7.72e-24 | 100 |
lateral plate mesoderm | 1.15e-17 | 203 |
blood | 2.02e-14 | 15 |
haemolymphatic fluid | 2.02e-14 | 15 |
organism substance | 2.02e-14 | 15 |
adult organism | 2.70e-12 | 114 |
connective tissue | 1.36e-09 | 371 |
musculoskeletal system | 7.27e-08 | 167 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 8.34e-09 | 10 |