FFCP PHASE1:Hg19::chr6:99849197..99849216,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25957 | |EntrezGene=25957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21222 | |HGNC=21222 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TF01 | |UniProt=Q8TF01 | ||
|association_with_transcript=50bp_to_AF314185_5end | |association_with_transcript=50bp_to_AF314185_5end | ||
|cluster_id=chr6:99849197..99849216,- | |||
|coexpression_cluster_id=C905 | |||
|description=CAGE_peak_7_at_PNISR_5end | |description=CAGE_peak_7_at_PNISR_5end | ||
|id=chr6:99849197..99849216,- | |id=chr6:99849197..99849216,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.01e-07,53;CL:0000051,3.01e-07,53;CL:0000838,7.11e-07,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!9.03e-15!235;DOID:14566!3.90e-14!239;DOID:0050686!5.34e-07!137;DOID:2531!6.18e-07!51;DOID:0060083!6.18e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.05e-07!57;UBERON:0005068!9.05e-07!57;UBERON:0006241!9.05e-07!57;UBERON:0007135!9.05e-07!57 | |ontology_enrichment_uberon=UBERON:0001049!9.05e-07!57;UBERON:0005068!9.05e-07!57;UBERON:0006241!9.05e-07!57;UBERON:0007135!9.05e-07!57 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.73e-10,56;UBERON:0005068,5.73e-10,56;UBERON:0006241,5.73e-10,56;UBERON:0007135,5.73e-10,56;UBERON:0000073,2.44e-09,53;UBERON:0002616,2.44e-09,53;UBERON:0002346,1.16e-08,86;UBERON:0002780,1.35e-07,41;UBERON:0001890,1.35e-07,41;UBERON:0003080,1.35e-07,41;UBERON:0006240,1.35e-07,41;UBERON:0003528,4.91e-07,34;UBERON:0002020,4.91e-07,34;UBERON:0003075,5.52e-07,82;UBERON:0007284,5.52e-07,82;UBERON:0001016,8.28e-07,89 | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.140954404095971,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0.245733936501509,0,0.436882744260345,0,0,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,1.46379839637152,0,0,0,0.572471974262113,1.36874425072884,0.627713197974014,1.52826811495903,1.23150884174919,0.865818594450472,0.786728553697808,0,0,0,0,0,1.16200800870452,1.13735385989937,0.293600439334847,0.553995408531877,4.21143339687298,3.03815219002193,0.223915474239924,0.32389366601898,0.257575567634187,1.16318591023652,1.13362783106643,0.242584061187816,0.697287110717054,0,0.619412741790207,0,1.2808035326455,0.47296445977717,1.03423704220986,0,0,0.941211697713023,0.818718450173537,0.449446968890169,1.53041946185451,0.320929027076094,0.639337125799041,0.989553900560148,0,0.852449501065388,3.48251086354301,0,0.622822248995575,2.51248665256743,4.69334626578181,0,1.81619850790011,0.736555271975129,0.632924774881769,0.633765858935825,0.850417199860174,0.209658645508376,1.01095768031846,0.600707571366025,0.32145117339416,0.855038231223746,0.59675003159727,0,3.51992488922645,0,0,0,1.60158394814405,0.574752439954483,1.32208974556972,0,11.384259382189,2.34894875748376,3.05818582500183,2.64342657158052,0.560508562981536,0.790152254325231,1.37696839079683,6.6811829667358,2.2616164889946,0.334372990781356,0.32592226663359,0.473447805734733,0,0.891283655081389,1.76763544484902,1.99380505125259,0.812411591295047,2.68991771423918,2.08094956095805,1.31550323682941,0.829050053357545,0.869409257205157,2.66915813691709,1.60524496853828,3.1360657141493,1.24640276967323,1.91610246800961,1.37450978193052,1.77113784413652,0.318565414324097,0.651083453856419,0,0,0.383959833463255,0,0.236777252044017,0,1.61285394579786,4.27904313253612,5.35850294366356,4.87613732627923,0,0,0,0,0.869079113764942,0,0,0.661743720148475,1.55210578223795,2.10803485663503,0.0654895377488563,0,0,0,0.696518949197069,1.06366368415092,0.953962497221368,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0.516833518338658,0,0.66944122552934,0,0.760272105718513,0.24406205754817,1.10298924103761,0,0.446498641420399,0.44905874525234,0,0,0,0.183201743930407,1.31780417436063,3.87780264148325,0,0.993943903390637,0.25326102332916,1.19168262731897,2.29469296599051,0.709336764396714,0,0,0,0,0.538842688278752,0.163461903113459,0,0.576175924479999,0.468642863667593,0.312160076830321,0,1.34503812496621,0,0.161872944368132,0,0,1.22834317311768,0.206651562351531,0,0.741800787835671,0,0,0.673344455816265,0.750711119231785,0,0,0,0.150238058906597,0.113432183160021,1.79389635688862,1.06778694409284,0.423863802319124,0.900273288253207,0.618315175430633,3.09168648054755,0.37223371266318,0.843881661206331,0.487185025805993,2.52433774244115,0.460249493211497,0.80823028409406,1.06502877754984,0.403008392910561,0.169560592310488,0,0.272746120590835,0,3.29329006549908,2.38553582978673,2.20768491452085,1.96956004529204,2.27088765788066,1.09493207722749,0,0,0,1.39310378409594,0,0.354920400119532,0.674338760312407,0.482022059766964,1.21323370005633,0.653638332277218,1.18635309555548,0.404493924480493,0.392442930250692,0.769494313892781,0,0,0,0,0,0,1.77236972004421,1.32438929824395,0.491953754172454,0.514703430895577,0.439001141634502,0,0.904760751704678,0.370353780634118,0,0,0,0.231860809950154,0,0,0,1.14152491340759,0,0,0.492434012174795,0.702012795417713,0.297262324577456,0,0.839910640994298,0.141775097242386,0.447792613514241,0.581267877027924,0,0,0.264145302039678,0,0.288239906833923,0,0.317489471460845,0,0,0,0.308482478109971,0.600686115687835,1.14330573052231,0,0,0.1466765716419,0.517086863031111,0,1.690605505112,0.26593811658487,1.04007436911366,0,0,0,0.57191197463259,0.542621605391443,0,0.325736184293735,0,0,0,0,1.59956785891291,0,1.00451418286425,6.32501818449095,0.479249710983165,1.14861935834114,0,0.289562613335158,0.821905290201534,0.716243852959582,1.00876629594175,1.57624608161542,5.17506179662842,5.39040752374943,0.254094624222463,0,0,0.670065061337395,0.637938751653163,4.49404214368309,17.9496875522415,0.828831026872071,0.36807447515742,1.00034104211935,0,0.831883446123229,1.96271887676878,0.630809660135739,0.585707074963566,0,0,0,0,0,0.781952530212746,0,0,2.48121631347465,1.50999940573032,0.640365346820666,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.128139149255701,0.511707249066704,0.804269605718038,0,0.308419387605311,0.532685175939381,0.164254312027618,0.519254429183621,0.232420756919918,0.846016147141356,0.40101294060657,3.22283461275637,0.574072240823034,1.45672934405374,1.18011973463482,0,0.616122696835318,0,0,0.422206515571503,0,0,0.431831832204279,0,0,0,0,0,0,0.657779629937804,0,0.512900250232778,0,0,0.721287081534056,2.19766715564024,0.247528499761764,0,0,0,0.48335359146061,0.308097234229289,0.15350367472613,0.137836572484531,0.859361958946189,2.61030049045611,0.681813019328807,0.445160178233687,0.495854746082934,1.15314040419064,0.765676274967505,0.708104465988849,0.464845549297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| ||
|short_description=p7@PNISR | |short_description=p7@PNISR | ||
}} | }} |
Latest revision as of 06:18, 20 September 2015
Short description: | p7@PNISR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PNISR_5end |
Coexpression cluster: | C905_cerebellum_occipital_anaplastic_middle_parietal_Neutrophils_olfactory |
Association with transcript: | 50bp_to_AF314185_5end |
EntrezGene: | PNISR |
HGNC: | 21222 |
UniProt: | Q8TF01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.01e-07 | 53 |
common lymphoid progenitor | 3.01e-07 | 53 |
lymphoid lineage restricted progenitor cell | 7.11e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
neural tube | 5.73e-10 | 56 |
neural rod | 5.73e-10 | 56 |
future spinal cord | 5.73e-10 | 56 |
neural keel | 5.73e-10 | 56 |
regional part of nervous system | 2.44e-09 | 53 |
regional part of brain | 2.44e-09 | 53 |
neurectoderm | 1.16e-08 | 86 |
regional part of forebrain | 1.35e-07 | 41 |
forebrain | 1.35e-07 | 41 |
anterior neural tube | 1.35e-07 | 41 |
future forebrain | 1.35e-07 | 41 |
brain grey matter | 4.91e-07 | 34 |
gray matter | 4.91e-07 | 34 |
neural plate | 5.52e-07 | 82 |
presumptive neural plate | 5.52e-07 | 82 |
nervous system | 8.28e-07 | 89 |