FFCP PHASE1:Hg19::chr6:125367685..125367700,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=154214 | |EntrezGene=154214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21487 | |HGNC=21487 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TC41 | |UniProt=Q8TC41 | ||
|association_with_transcript=-45bp_to_ENST00000368415_5end | |association_with_transcript=-45bp_to_ENST00000368415_5end | ||
|cluster_id=chr6:125367685..125367700,+ | |||
|coexpression_cluster_id=C2198 | |coexpression_cluster_id=C2198 | ||
|description=CAGE_peak_16_at_RNF217_5end | |description=CAGE_peak_16_at_RNF217_5end | ||
|id=chr6:125367685..125367700,+ | |id=chr6:125367685..125367700,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.30e-16!43;CL:0002541!1.88e-13!3;CL:0002251!2.96e-13!21;CL:0000223!1.09e-12!59;CL:0002621!1.09e-12!3;CL:0000066!4.99e-12!254;CL:0002159!8.00e-11!13;CL:0000244!1.43e-09!4;CL:0000731!1.43e-09!4;CL:0000317!4.72e-09!2;CL:1000448!4.72e-09!2;CL:0002308!4.72e-09!2;CL:0002140!4.72e-09!2;CL:0002536!1.03e-08!2;CL:0000039!1.83e-08!7;CL:0000586!1.83e-08!7;CL:0000362!2.27e-08!8;CL:0002537!3.60e-08!5 | |ontology_enrichment_celltype=CL:0002076!2.30e-16!43;CL:0002541!1.88e-13!3;CL:0002251!2.96e-13!21;CL:0000223!1.09e-12!59;CL:0002621!1.09e-12!3;CL:0000066!4.99e-12!254;CL:0002159!8.00e-11!13;CL:0000244!1.43e-09!4;CL:0000731!1.43e-09!4;CL:0000317!4.72e-09!2;CL:1000448!4.72e-09!2;CL:0002308!4.72e-09!2;CL:0002140!4.72e-09!2;CL:0002536!1.03e-08!2;CL:0000039!1.83e-08!7;CL:0000586!1.83e-08!7;CL:0000362!2.27e-08!8;CL:0002537!3.60e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.26e-38;3!CL:0000349;7.90e-32;19!CL:0002537;2.38e-23;5!CL:0002159;6.11e-22;14!CL:0002166;2.30e-17;3!CL:0002621;3.48e-17;3!CL:0000362;5.88e-13;9!CL:0000312;6.46e-11;5!CL:0000240;3.02e-09;6!CL:0000311;3.02e-09;6!CL:0000079;3.02e-09;6!CL:0000237;3.02e-09;6!CL:0002077;6.32e-08;34!CL:0000317;2.12e-07;2!CL:1000448;2.12e-07;2!CL:0002308;2.12e-07;2!CL:0002140;2.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.26e-38,3;CL:0000349,8.28e-32,19;CL:0002537,2.57e-23,5;CL:0002159,4.69e-22,14;CL:0002166,1.94e-17,3;CL:0002621,4.46e-17,3;CL:0000362,4.99e-13,9;CL:0000312,5.85e-11,5;CL:0000240,2.78e-09,6;CL:0000311,2.78e-09,6;CL:0000079,2.78e-09,6;CL:0000237,2.78e-09,6;CL:0000036,2.78e-09,6;CL:0000357,2.78e-09,6;CL:0000114,2.78e-09,6;CL:0002077,4.52e-09,34;CL:0000317,1.87e-07,2;CL:1000448,1.87e-07,2;CL:0002308,1.87e-07,2;CL:0002140,1.87e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000357;3.02e-09;6!CL:0000114;3.02e-09;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005631;4.09e-45;10!UBERON:0000158;4.09e-45;10!UBERON:0003124;1.26e-38;3!UBERON:0000920;1.26e-38;3!UBERON:0000478;4.16e-25;24!UBERON:0001949;3.48e-17;3!UBERON:0000305;7.13e-17;7!UBERON:0001708;2.84e-13;4!UBERON:0008895;2.84e-13;4!UBERON:0011159;8.29e-11;5!UBERON:0000486;7.32e-10;12!UBERON:0010371;1.63e-09;31!UBERON:0001003;5.38e-08;15!UBERON:0007376;5.38e-08;15!UBERON:0003929;6.75e-08;7!UBERON:0004923;1.06e-07;55!UBERON:0002419;2.12e-07;2!UBERON:0007771;2.12e-07;2!UBERON:0003297;2.12e-07;2!UBERON:0001821;2.12e-07;2!UBERON:0003487;2.12e-07;2!UBERON:0001820;2.12e-07;2!UBERON:0003350;5.14e-07;8!UBERON:0001828;5.14e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.63e-43,14;UBERON:0000158,2.63e-43,14;UBERON:0000920,1.26e-38,3;UBERON:0003124,5.90e-29,7;UBERON:0000478,4.32e-25,24;UBERON:0001949,4.46e-17,3;UBERON:0000305,7.53e-17,7;UBERON:0004871,8.01e-15,8;UBERON:0004923,2.70e-14,66;UBERON:0001708,2.51e-13,4;UBERON:0008895,2.51e-13,4;UBERON:0011159,7.51e-11,5;UBERON:0010188,3.42e-09,6;UBERON:0002539,3.42e-09,6;UBERON:0008816,3.42e-09,6;UBERON:0001003,4.88e-08,15;UBERON:0007376,4.88e-08,15;UBERON:0007383,4.88e-08,15;UBERON:0002419,1.87e-07,2;UBERON:0007771,1.87e-07,2;UBERON:0003297,1.87e-07,2;UBERON:0001821,1.87e-07,2;UBERON:0003487,1.87e-07,2;UBERON:0001820,1.87e-07,2;UBERON:0005089,1.87e-07,2;UBERON:0005088,1.87e-07,2;UBERON:0003102,3.88e-07,99;UBERON:0003350,5.63e-07,8;UBERON:0001828,5.63e-07,8 | |||
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| ||
|short_description=p16@RNF217 | |short_description=p16@RNF217 | ||
}} | }} |
Latest revision as of 07:09, 20 September 2015
Short description: | p16@RNF217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_RNF217_5end |
Coexpression cluster: | C2198_amniotic_chorionic_Urothelial_Mallassezderived_Keratinocyte_Sebocyte_Prostate |
Association with transcript: | -45bp_to_ENST00000368415_5end |
EntrezGene: | RNF217 |
HGNC: | 21487 |
UniProt: | Q8TC41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.26e-38 | 3 |
extraembryonic cell | 8.28e-32 | 19 |
amnion mesenchymal stem cell | 2.57e-23 | 5 |
general ecto-epithelial cell | 4.69e-22 | 14 |
epithelial cell of Malassez | 1.94e-17 | 3 |
gingival epithelial cell | 4.46e-17 | 3 |
epidermal cell | 4.99e-13 | 9 |
keratinocyte | 5.85e-11 | 5 |
stratified squamous epithelial cell | 2.78e-09 | 6 |
keratin accumulating cell | 2.78e-09 | 6 |
stratified epithelial cell | 2.78e-09 | 6 |
keratinizing barrier epithelial cell | 2.78e-09 | 6 |
epithelial fate stem cell | 2.78e-09 | 6 |
stratified epithelial stem cell | 2.78e-09 | 6 |
surface ectodermal cell | 2.78e-09 | 6 |
ecto-epithelial cell | 4.52e-09 | 34 |
sebum secreting cell | 1.87e-07 | 2 |
epithelial cell of sweat gland | 1.87e-07 | 2 |
epithelial cell of skin gland | 1.87e-07 | 2 |
acinar cell of sebaceous gland | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.63e-43 | 14 |
membranous layer | 2.63e-43 | 14 |
egg chorion | 1.26e-38 | 3 |
chorion | 5.90e-29 | 7 |
extraembryonic structure | 4.32e-25 | 24 |
gingival epithelium | 4.46e-17 | 3 |
amnion | 7.53e-17 | 7 |
somatic layer of lateral plate mesoderm | 8.01e-15 | 8 |
organ component layer | 2.70e-14 | 66 |
jaw skeleton | 2.51e-13 | 4 |
splanchnocranium | 2.51e-13 | 4 |
primary subdivision of cranial skeletal system | 7.51e-11 | 5 |
protuberance | 3.42e-09 | 6 |
pharyngeal arch | 3.42e-09 | 6 |
embryonic head | 3.42e-09 | 6 |
skin epidermis | 4.88e-08 | 15 |
outer epithelium | 4.88e-08 | 15 |
enveloping layer of ectoderm | 4.88e-08 | 15 |
skin gland | 1.87e-07 | 2 |
epidermis gland | 1.87e-07 | 2 |
gland of integumental system | 1.87e-07 | 2 |
sebaceous gland | 1.87e-07 | 2 |
skin sebaceous gland | 1.87e-07 | 2 |
sweat gland | 1.87e-07 | 2 |
sweat gland placode | 1.87e-07 | 2 |
sebaceous gland placode | 1.87e-07 | 2 |
surface structure | 3.88e-07 | 99 |
epithelium of mucosa | 5.63e-07 | 8 |
gingiva | 5.63e-07 | 8 |