FFCP PHASE1:Hg19::chr1:207495719..207495761,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1604 | |EntrezGene=1604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=2665 | |HGNC=2665 | ||
|TSSclassifier=strong | |||
|UniProt=P08174 | |UniProt=P08174 | ||
|association_with_transcript=0bp_to_U88576_5end | |association_with_transcript=0bp_to_U88576_5end | ||
|cluster_id=chr1:207495719..207495761,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_2_at_CD55_5end | |description=CAGE_peak_2_at_CD55_5end | ||
|id=chr1:207495719..207495761,+ | |id=chr1:207495719..207495761,+ | ||
|ontology_enrichment_celltype=CL:0000860;3.16e-28;33!CL:0002057;3.16e-28;33!CL:0000473;1.52e-20;39!CL:0000234;1.52e-20;39!CL:0000576;2.89e-18;48!CL:0000766;5.55e-16;69!CL:0000094;2.44e-08;8!CL:0000763;5.47e-08;100 | |ontology_enrichment_celltype=CL:0000860!2.01e-26!45;CL:0002057!1.79e-24!42;CL:0000766!2.34e-22!76;CL:0000738!1.33e-21!140;CL:0000557!2.90e-18!71;CL:0000839!4.88e-18!70;CL:0002009!1.19e-17!65;CL:0000763!1.05e-16!112;CL:0000049!1.05e-16!112;CL:0002194!1.29e-16!63;CL:0000576!1.29e-16!63;CL:0000040!1.29e-16!63;CL:0000559!1.29e-16!63;CL:0000037!2.14e-16!172;CL:0000566!2.14e-16!172;CL:0002031!3.20e-16!124;CL:0002032!3.95e-16!165;CL:0000837!3.95e-16!165;CL:0002087!4.25e-15!119;CL:0000988!4.69e-15!182 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;3.16e-28;33!CL:0002057;3.16e-28;33!CL:0000473;1.52e-20;39!CL:0000234;1.52e-20;39!CL:0000576;2.89e-18;48!CL:0000766;5.55e-16;69!CL:0000094;2.44e-08;8!CL:0000763;5.47e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.36e-36,42;CL:0002057,5.36e-36,42;CL:0000473,2.18e-32,48;CL:0000234,2.18e-32,48;CL:0000766,1.30e-30,72;CL:0000557,4.60e-25,67;CL:0002009,1.10e-23,61;CL:0000738,1.81e-23,136;CL:0000839,6.95e-23,66;CL:0002194,3.77e-22,59;CL:0000576,3.77e-22,59;CL:0000040,3.77e-22,59;CL:0000559,3.77e-22,59;CL:0000763,2.46e-21,108;CL:0000049,2.46e-21,108;CL:0000037,1.98e-16,168;CL:0002032,3.39e-16,161;CL:0000837,3.39e-16,161;CL:0002031,4.08e-16,120;CL:0000988,2.16e-15,177;CL:0002087,5.60e-15,115;CL:0000094,2.18e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.08e-26;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001737;7.91e-10;9!UBERON:0001557;7.91e-10;9 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.79e-19!102;UBERON:0003061!3.79e-19!102;UBERON:0002193!2.28e-18!112;UBERON:0002371!4.80e-16!80;UBERON:0001474!7.12e-15!86;UBERON:0004765!2.42e-11!101;UBERON:0001434!2.42e-11!101;UBERON:0003081!8.05e-10!216;UBERON:0002405!3.23e-09!115;UBERON:0001737!4.96e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.91e-10;9!UBERON:0001557;7.91e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.48e-25,98;UBERON:0003061,8.48e-25,98;UBERON:0002193,1.20e-22,108;UBERON:0002371,1.94e-21,76;UBERON:0001474,4.01e-19,82;UBERON:0002405,1.71e-17,93;UBERON:0004765,9.85e-16,90;UBERON:0001434,1.21e-13,100;UBERON:0003081,2.05e-13,203;UBERON:0001737,8.89e-10,9;UBERON:0000926,4.10e-07,315;UBERON:0004120,4.10e-07,315;UBERON:0006603,4.10e-07,315 | |||
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| ||
|short_description=p2@CD55 | |short_description=p2@CD55 | ||
}} | }} |
Latest revision as of 07:40, 20 September 2015
Short description: | p2@CD55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CD55_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_U88576_5end |
EntrezGene: | CD55 |
HGNC: | 2665 |
UniProt: | P08174 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.36e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.36e-36 | 42 |
defensive cell | 2.18e-32 | 48 |
phagocyte | 2.18e-32 | 48 |
myeloid leukocyte | 1.30e-30 | 72 |
granulocyte monocyte progenitor cell | 4.60e-25 | 67 |
macrophage dendritic cell progenitor | 1.10e-23 | 61 |
leukocyte | 1.81e-23 | 136 |
myeloid lineage restricted progenitor cell | 6.95e-23 | 66 |
monopoietic cell | 3.77e-22 | 59 |
monocyte | 3.77e-22 | 59 |
monoblast | 3.77e-22 | 59 |
promonocyte | 3.77e-22 | 59 |
myeloid cell | 2.46e-21 | 108 |
common myeloid progenitor | 2.46e-21 | 108 |
hematopoietic stem cell | 1.98e-16 | 168 |
hematopoietic oligopotent progenitor cell | 3.39e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.39e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 4.08e-16 | 120 |
hematopoietic cell | 2.16e-15 | 177 |
nongranular leukocyte | 5.60e-15 | 115 |
granulocyte | 2.18e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.48e-25 | 98 |
blood island | 8.48e-25 | 98 |
hemolymphoid system | 1.20e-22 | 108 |
bone marrow | 1.94e-21 | 76 |
bone element | 4.01e-19 | 82 |
immune system | 1.71e-17 | 93 |
skeletal element | 9.85e-16 | 90 |
skeletal system | 1.21e-13 | 100 |
lateral plate mesoderm | 2.05e-13 | 203 |
larynx | 8.89e-10 | 9 |
mesoderm | 4.10e-07 | 315 |
mesoderm-derived structure | 4.10e-07 | 315 |
presumptive mesoderm | 4.10e-07 | 315 |