FFCP PHASE1:Hg19::chrX:20075062..20075077,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:20075062..20075077,-
|short_description=p7@MAP7D2
|description=CAGE_peak_7_at_MAP7D2_5end
|association_with_transcript=-153bp_to_uc004czq.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=256714 | |EntrezGene=256714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25899 | |HGNC=25899 | ||
|TSSclassifier=strong | |||
|UniProt=Q96T17 | |UniProt=Q96T17 | ||
|association_with_transcript=-153bp_to_uc004czq.1_5end | |||
|cluster_id=chrX:20075062..20075077,- | |||
|coexpression_cluster_id=C4868 | |||
|description=CAGE_peak_7_at_MAP7D2_5end | |||
|id=chrX:20075062..20075077,- | |||
|ontology_enrichment_celltype=CL:0000242!3.87e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.29e-24;2!CL:0000242;1.29e-24;2!CL:0000312;1.95e-10;5!CL:0000240;7.62e-09;6!CL:0000311;7.62e-09;6!CL:0000079;7.62e-09;6!CL:0000237;7.62e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.45e-24,2;CL:0000312,2.04e-10,5;CL:0000240,7.93e-09,6;CL:0000311,7.93e-09,6;CL:0000079,7.93e-09,6;CL:0000237,7.93e-09,6;CL:0000036,7.93e-09,6;CL:0000357,7.93e-09,6;CL:0000114,7.93e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000357;7.62e-09;6!CL:0000114;7.62e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;4.98e-07;2!DOID:4468;4.98e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.98e-07,2;DOID:3910,5.28e-07,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002298;2.23e-31;6!UBERON:0000988;7.90e-17;3!UBERON:0001896;2.48e-16;3!UBERON:0005290;2.48e-16;3!UBERON:0004733;7.18e-16;12!UBERON:0002028;7.18e-16;12!UBERON:0004732;1.13e-14;13!UBERON:0002148;3.09e-07;2!UBERON:0006331;3.09e-07;2!UBERON:0009662;3.09e-07;2!UBERON:0001905;4.98e-07;2!UBERON:0004903;4.98e-07;2!UBERON:0002757;4.98e-07;2!UBERON:0010134;4.98e-07;2!UBERON:0005408;4.98e-07;2!UBERON:0001899;4.98e-07;2!UBERON:0002173;4.98e-07;2!UBERON:0002186;4.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,2.14e-31,6;UBERON:0003076,2.17e-19,15;UBERON:0003057,2.17e-19,15;UBERON:0000988,8.55e-17,3;UBERON:0001896,2.20e-16,3;UBERON:0005290,2.20e-16,3;UBERON:0010096,2.20e-16,3;UBERON:0004733,7.04e-16,12;UBERON:0002028,7.04e-16,12;UBERON:0007277,7.04e-16,12;UBERON:0004732,1.11e-14,13;UBERON:0002148,3.09e-07,2;UBERON:0006331,3.09e-07,2;UBERON:0009662,3.09e-07,2;UBERON:0004903,5.28e-07,2;UBERON:0002173,5.28e-07,2;UBERON:0002186,5.28e-07,2;UBERON:0001049,5.50e-07,56;UBERON:0005068,5.50e-07,56;UBERON:0006241,5.50e-07,56;UBERON:0007135,5.50e-07,56;UBERON:0001905,5.60e-07,2;UBERON:0002757,5.60e-07,2;UBERON:0010134,5.60e-07,2;UBERON:0005408,5.60e-07,2;UBERON:0001899,5.60e-07,2 | |||
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| ||
|short_description=p7@MAP7D2 | |||
}} | }} |
Latest revision as of 16:01, 24 September 2015
Short description: | p7@MAP7D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MAP7D2_5end |
Coexpression cluster: | C4868_neuroectodermal_carcinoid_merkel_locus_pons_renal_B |
Association with transcript: | -153bp_to_uc004czq.1_5end |
EntrezGene: | MAP7D2 |
HGNC: | 25899 |
UniProt: | Q96T17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.45e-24 | 2 |
keratinocyte | 2.04e-10 | 5 |
stratified squamous epithelial cell | 7.93e-09 | 6 |
keratin accumulating cell | 7.93e-09 | 6 |
stratified epithelial cell | 7.93e-09 | 6 |
keratinizing barrier epithelial cell | 7.93e-09 | 6 |
epithelial fate stem cell | 7.93e-09 | 6 |
stratified epithelial stem cell | 7.93e-09 | 6 |
surface ectodermal cell | 7.93e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
brainstem | 2.14e-31 | 6 |
posterior neural tube | 2.17e-19 | 15 |
chordal neural plate | 2.17e-19 | 15 |
pons | 8.55e-17 | 3 |
medulla oblongata | 2.20e-16 | 3 |
myelencephalon | 2.20e-16 | 3 |
future myelencephalon | 2.20e-16 | 3 |
segmental subdivision of hindbrain | 7.04e-16 | 12 |
hindbrain | 7.04e-16 | 12 |
presumptive hindbrain | 7.04e-16 | 12 |
segmental subdivision of nervous system | 1.11e-14 | 13 |
locus ceruleus | 3.09e-07 | 2 |
brainstem nucleus | 3.09e-07 | 2 |
hindbrain nucleus | 3.09e-07 | 2 |
bronchoalveolar duct junction | 5.28e-07 | 2 |
alveolar duct | 5.28e-07 | 2 |
bronchiole | 5.28e-07 | 2 |
neural tube | 5.50e-07 | 56 |
neural rod | 5.50e-07 | 56 |
future spinal cord | 5.50e-07 | 56 |
neural keel | 5.50e-07 | 56 |
pineal body | 5.60e-07 | 2 |
regional part of epithalamus | 5.60e-07 | 2 |
secretory circumventricular organ | 5.60e-07 | 2 |
circumventricular organ | 5.60e-07 | 2 |
epithalamus | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.98e-07 | 2 |
lung adenocarcinoma | 5.28e-07 | 2 |