FFCP PHASE1:Hg19::chr2:219536749..219536815,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:219536749..219536815,+ to FFCP PHASE1:Hg19::chr2:219536749..219536815,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27148 | |EntrezGene=27148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17209 | |HGNC=17209 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRP7,A8MU99,C9J1B8 | |UniProt=Q9NRP7,A8MU99,C9J1B8 | ||
|association_with_transcript=0bp_to_ENST00000295709,ENST00000392105,ENST00000392106,ENST00000455724,NM_001243313,NM_015690,uc002viu.2,uc002viv.2_5end | |||
|cluster_id=chr2:219536749..219536815,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_STK36_5end | |||
|id=chr2:219536749..219536815,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!1.13e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:120;7.47e-08;27!DOID:193;6.66e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:120,1.12e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0003056!1.19e-08!61;UBERON:0002346!1.44e-08!90;UBERON:0001049!2.96e-08!57;UBERON:0005068!2.96e-08!57;UBERON:0006241!2.96e-08!57;UBERON:0007135!2.96e-08!57;UBERON:0000153!3.75e-08!129;UBERON:0007811!3.75e-08!129;UBERON:0003075!3.85e-08!86;UBERON:0007284!3.85e-08!86;UBERON:0000033!7.05e-08!123;UBERON:0000955!9.28e-08!69;UBERON:0006238!9.28e-08!69;UBERON:0000073!1.06e-07!94;UBERON:0001016!1.06e-07!94;UBERON:0000924!1.36e-07!173;UBERON:0006601!1.36e-07!173;UBERON:0002616!1.38e-07!59;UBERON:0005743!1.39e-07!86;UBERON:0004121!3.32e-07!169;UBERON:0001017!6.44e-07!82;UBERON:0003080!9.17e-07!42 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.60e-08,86;UBERON:0001049,3.80e-08,56;UBERON:0005068,3.80e-08,56;UBERON:0006241,3.80e-08,56;UBERON:0007135,3.80e-08,56;UBERON:0003056,5.59e-08,61;UBERON:0003075,6.92e-08,82;UBERON:0007284,6.92e-08,82;UBERON:0000073,7.21e-08,53;UBERON:0002616,7.21e-08,53;UBERON:0000955,1.19e-07,68;UBERON:0006238,1.19e-07,68;UBERON:0001016,5.88e-07,89;UBERON:0004121,7.98e-07,171;UBERON:0000924,7.98e-07,171;UBERON:0006601,7.98e-07,171;UBERON:0001017,8.48e-07,81 | |||
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| ||
|short_description=p2@STK36 | |||
}} | }} |
Latest revision as of 18:09, 24 September 2015
Short description: | p2@STK36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_STK36_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000295709, ENST00000392105, ENST00000392106, ENST00000455724, NM_001243313, NM_015690, uc002viu.2, uc002viv.2_5end |
EntrezGene: | STK36 |
HGNC: | 17209 |
UniProt: | Q9NRP7A8MU99C9J1B8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.60e-08 | 86 |
neural tube | 3.80e-08 | 56 |
neural rod | 3.80e-08 | 56 |
future spinal cord | 3.80e-08 | 56 |
neural keel | 3.80e-08 | 56 |
pre-chordal neural plate | 5.59e-08 | 61 |
neural plate | 6.92e-08 | 82 |
presumptive neural plate | 6.92e-08 | 82 |
regional part of nervous system | 7.21e-08 | 53 |
regional part of brain | 7.21e-08 | 53 |
brain | 1.19e-07 | 68 |
future brain | 1.19e-07 | 68 |
nervous system | 5.88e-07 | 89 |
ectoderm-derived structure | 7.98e-07 | 171 |
ectoderm | 7.98e-07 | 171 |
presumptive ectoderm | 7.98e-07 | 171 |
central nervous system | 8.48e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 1.12e-07 | 27 |