FFCP PHASE1:Hg19::chr11:83436366..83436383,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1740 | |EntrezGene=1740 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2901 | |HGNC=2901 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQT9 | |UniProt=E9PQT9 | ||
|association_with_transcript=62bp_to_ENST00000529399_5end | |association_with_transcript=62bp_to_ENST00000529399_5end | ||
|cluster_id=chr11:83436366..83436383,- | |||
|coexpression_cluster_id=C2169 | |||
|description=CAGE_peak_27_at_DLG2_5end | |description=CAGE_peak_27_at_DLG2_5end | ||
|id=chr11:83436366..83436383,- | |id=chr11:83436366..83436383,- | ||
|ontology_enrichment_celltype=CL:0000039!5.62e-14!7;CL:0000586!5.62e-14!7;CL:0002322!3.02e-13!5 | |ontology_enrichment_celltype=CL:0000039!5.62e-14!7;CL:0000586!5.62e-14!7;CL:0002322!3.02e-13!5 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.23e-21;6!CL:0000404;1.23e-21;6!CL:0000333;1.74e-12;5!CL:0000039;5.59e-09;7!CL:0000586;5.59e-09;7!CL:0002253;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.27e-21,6;CL:0000031,1.27e-21,6;CL:0000404,1.27e-21,6;CL:0000047,2.15e-16,8;CL:0000039,5.16e-09,7;CL:0000586,5.16e-09,7;CL:0002253,2.15e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000031;1.23e-21;6!UBERON:0010122;2.40e-08;2 | |||
|ontology_enrichment_disease=DOID:3095!4.07e-22!22;DOID:2994!4.07e-22!22;DOID:171!2.75e-10!10 | |||
|ontology_enrichment_disease_v019=DOID:171;6.17e-36;10!DOID:3095;2.80e-31;22!DOID:2994;2.80e-31;22!DOID:169;1.46e-10;6!DOID:3193;1.44e-08;2!DOID:962;1.44e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.17e-36,10;DOID:3095,2.56e-31,22;DOID:2994,2.56e-31,22;DOID:169,1.50e-10,6;DOID:3193,1.50e-08,2;DOID:962,1.50e-08,2;DOID:0050687,3.27e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.13e-14!115;UBERON:0001869!4.83e-12!32;UBERON:0002780!7.92e-12!41;UBERON:0001890!7.92e-12!41;UBERON:0006240!7.92e-12!41;UBERON:0003080!1.84e-11!42;UBERON:0001893!3.66e-11!34;UBERON:0002346!3.25e-10!90;UBERON:0002791!6.79e-10!33;UBERON:0002020!1.58e-09!34;UBERON:0003528!1.58e-09!34;UBERON:0000073!2.51e-09!94;UBERON:0001016!2.51e-09!94;UBERON:0001017!2.79e-09!82;UBERON:0005743!1.28e-08!86;UBERON:0001049!1.44e-08!57;UBERON:0005068!1.44e-08!57;UBERON:0006241!1.44e-08!57;UBERON:0007135!1.44e-08!57;UBERON:0002616!3.75e-08!59;UBERON:0001950!4.56e-08!20;UBERON:0003056!8.71e-08!61;UBERON:0002420!1.58e-07!9;UBERON:0007245!1.58e-07!9;UBERON:0010009!1.58e-07!9;UBERON:0010011!1.58e-07!9;UBERON:0000454!1.58e-07!9;UBERON:0002619!3.18e-07!22;UBERON:0000955!3.28e-07!69;UBERON:0006238!3.28e-07!69;UBERON:0000369!3.41e-07!4;UBERON:0002435!3.41e-07!4;UBERON:0000204!3.41e-07!4;UBERON:0010082!3.41e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.71e-33;4!UBERON:0000923;4.71e-33;4!UBERON:0010316;4.71e-33;4!UBERON:0005291;4.71e-33;4!UBERON:0002050;1.34e-26;5!UBERON:0005423;1.34e-26;5!UBERON:0001882;2.21e-15;1!UBERON:0005403;2.21e-15;1!UBERON:0000369;5.24e-15;4!UBERON:0002435;5.24e-15;4!UBERON:0000204;5.24e-15;4!UBERON:0000013;1.74e-12;5!UBERON:0002410;1.74e-12;5!UBERON:0009663;5.59e-09;7!UBERON:0003714;1.44e-08;2!UBERON:0001873;2.40e-08;2!UBERON:0000473;5.76e-08;8!UBERON:0000010;2.48e-07;8!UBERON:0002420;3.55e-07;9!UBERON:0000125;3.55e-07;9!UBERON:0007245;3.55e-07;9!UBERON:0002308;3.55e-07;9!UBERON:0010009;3.55e-07;9!UBERON:0010011;3.55e-07;9!UBERON:0000454;3.55e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001882,3.66e-15,1;UBERON:0005403,3.66e-15,1;UBERON:0000369,6.49e-15,4;UBERON:0002435,6.49e-15,4;UBERON:0000204,6.49e-15,4;UBERON:0010082,6.49e-15,4;UBERON:0000013,1.79e-12,5;UBERON:0002410,1.79e-12,5;UBERON:0009663,6.31e-09,7;UBERON:0003714,1.50e-08,2;UBERON:0001873,2.31e-08,2;UBERON:0010122,2.31e-08,2;UBERON:0000473,5.37e-08,8;UBERON:0000010,2.52e-07,8;UBERON:0002420,3.90e-07,9;UBERON:0000125,3.90e-07,9;UBERON:0007245,3.90e-07,9;UBERON:0002308,3.90e-07,9;UBERON:0010009,3.90e-07,9;UBERON:0010011,3.90e-07,9;UBERON:0000454,3.90e-07,9;UBERON:0004121,4.24e-07,171;UBERON:0000924,4.24e-07,171;UBERON:0006601,4.24e-07,171;UBERON:0001016,5.34e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.609868530647977,0.530119073285941,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0,0,0.716084698702437,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.874813840149763,0,0,1.5677537021303,0,0,0,0.219385397153973,0.21787692703798,0,0.615602068030377,0,0.23056390438806,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0,0,0,0.189932387867636,0.586654148204409,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.53746777989381,0,0,0,0,0,0,0,0,0,1.76828463311521,1.2378549293751,1.24632101408756,0,0.77380195455795,0.182248669974074,0,0.0788057072991982,0,0,20.79733136261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67352101155024,0,8.99582408756334,19.1317428091515,3.47020139925206,8.37967376959866,0,0,0,0,0,1.02766760154335,0,0,0,0.252071696221718,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0.703484977438482,0,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0,0,0.078493092850514,0.942693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0.109265571963696,0.506794004045748,0.305966489225945,0.534434810531121,1.37842349302267,1.75495277504663,0,0,0,0.20686599172379,0,0.23806443146374,0,0.0620747142958579,0,0.25458863311266,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.609868530647977,0.530119073285941,0.232387885739037,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0,0,0.716084698702437,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0.874813840149763,0,0,1.5677537021303,0,0,0,0.219385397153973,0.21787692703798,0,0.615602068030377,0,0.23056390438806,0,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69623685720729,0,0,0.0884575645033392,0,0,0,0,0,0,0.468528891450678,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0.164230914106418,0.0969890164884194,0,0,0,0,0.189932387867636,0.586654148204409,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0.53746777989381,0,0,0,0,0,0,0,0,0,1.76828463311521,1.2378549293751,1.24632101408756,0,0.77380195455795,0.182248669974074,0,0.0788057072991982,0,0,20.79733136261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67352101155024,0,8.99582408756334,19.1317428091515,3.47020139925206,8.37967376959866,0,0,0,0,0,1.02766760154335,0,0,0,0.252071696221718,0.0691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0.202612753855184,0,0,0.126831620387814,0,0,0,0.703484977438482,0,0,0,0,0,0.0887023701626388,0,0,0,0.131545547125698,0,0,0.078493092850514,0.942693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0.109265571963696,0.506794004045748,0.305966489225945,0.534434810531121,1.37842349302267,1.75495277504663,0,0,0,0.20686599172379,0,0.23806443146374,0,0.0620747142958579,0,0.25458863311266,0.202117188958219,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p27@DLG2 | |short_description=p27@DLG2 | ||
}} | }} |
Latest revision as of 19:27, 24 September 2015
Short description: | p27@DLG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_DLG2_5end |
Coexpression cluster: | C2169_large_neuroectodermal_neuroblastoma_carcinoid_cerebellum_pineal_occipital |
Association with transcript: | 62bp_to_ENST00000529399_5end |
EntrezGene: | DLG2 |
HGNC: | 2901 |
UniProt: | E9PQT9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.27e-21 | 6 |
neuroblast | 1.27e-21 | 6 |
electrically signaling cell | 1.27e-21 | 6 |
neuronal stem cell | 2.15e-16 | 8 |
germ line cell | 5.16e-09 | 7 |
germ cell | 5.16e-09 | 7 |
epithelial cell of large intestine | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
nucleus accumbens | 3.66e-15 | 1 |
ventral striatum | 3.66e-15 | 1 |
corpus striatum | 6.49e-15 | 4 |
striatum | 6.49e-15 | 4 |
ventral part of telencephalon | 6.49e-15 | 4 |
future corpus striatum | 6.49e-15 | 4 |
sympathetic nervous system | 1.79e-12 | 5 |
autonomic nervous system | 1.79e-12 | 5 |
telencephalic nucleus | 6.31e-09 | 7 |
neural tissue | 1.50e-08 | 2 |
caudate nucleus | 2.31e-08 | 2 |
future caudate nucleus | 2.31e-08 | 2 |
testis | 5.37e-08 | 8 |
peripheral nervous system | 2.52e-07 | 8 |
basal ganglion | 3.90e-07 | 9 |
neural nucleus | 3.90e-07 | 9 |
nuclear complex of neuraxis | 3.90e-07 | 9 |
nucleus of brain | 3.90e-07 | 9 |
aggregate regional part of brain | 3.90e-07 | 9 |
collection of basal ganglia | 3.90e-07 | 9 |
cerebral subcortex | 3.90e-07 | 9 |
ectoderm-derived structure | 4.24e-07 | 171 |
ectoderm | 4.24e-07 | 171 |
presumptive ectoderm | 4.24e-07 | 171 |
nervous system | 5.34e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.17e-36 | 10 |
germ cell and embryonal cancer | 2.56e-31 | 22 |
germ cell cancer | 2.56e-31 | 22 |
neuroendocrine tumor | 1.50e-10 | 6 |
peripheral nerve sheath neoplasm | 1.50e-08 | 2 |
neurofibroma | 1.50e-08 | 2 |
cell type cancer | 3.27e-07 | 143 |