FFCP PHASE1:Hg19::chr9:124048815..124048834,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:124048815..124048834,+
|short_description=p25@GSN
|description=CAGE_peak_25_at_GSN_5end
|association_with_transcript=-35bp_to_ENST00000545652,uc011lyi.1_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2934 | |EntrezGene=2934 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4620 | |HGNC=4620 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1A8 | |UniProt=F5H1A8 | ||
|association_with_transcript=-35bp_to_ENST00000545652,uc011lyi.1_5end | |||
|cluster_id=chr9:124048815..124048834,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_25_at_GSN_5end | |||
|id=chr9:124048815..124048834,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;5.73e-07;2!CL:0001016;5.73e-07;2!CL:0002262;8.52e-07;2!CL:1000398;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,5.73e-07,2;CL:0001016,5.73e-07,2;CL:0002262,7.20e-07,2;CL:1000398,7.20e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;7.02e-13;1!UBERON:0004140;8.83e-13;1!UBERON:0010226;2.46e-12;1!UBERON:0005062;6.02e-12;4!UBERON:0007284;6.02e-12;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.49e-23;2!DOID:178;2.46e-12;1!DOID:326;2.46e-12;1!DOID:3978;2.46e-12;1!DOID:3394;2.46e-12;1!DOID:5844;2.46e-12;1!DOID:1287;3.65e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.42e-23,2;DOID:178,1.25e-12,1;DOID:326,1.25e-12,1;DOID:3978,1.25e-12,1;DOID:3394,1.25e-12,1;DOID:5844,1.25e-12,1;DOID:1287,2.76e-12,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.06e-27;25!UBERON:0004151;5.79e-16;3!UBERON:0003978;1.32e-15;3!UBERON:0000946;1.32e-15;3!UBERON:0002079;7.02e-13;1!UBERON:0000948;1.27e-12;22!UBERON:0002084;2.46e-12;1!UBERON:0002135;2.46e-12;1!UBERON:0002146;2.46e-12;1!UBERON:0002082;2.46e-12;1!UBERON:0005623;2.46e-12;1!UBERON:0003103;1.04e-07;61!UBERON:0002081;4.55e-07;2!UBERON:0001281;8.52e-07;2!UBERON:0003497;8.52e-07;2!UBERON:0003909;8.52e-07;2!UBERON:0002133;8.52e-07;2!UBERON:0003835;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.25e-26,27;UBERON:0004151,3.98e-16,3;UBERON:0003978,1.22e-15,3;UBERON:0009751,1.22e-15,3;UBERON:0000946,1.22e-15,3;UBERON:0002523,1.22e-15,3;UBERON:0005983,1.22e-15,3;UBERON:0002165,1.22e-15,3;UBERON:0002062,1.22e-15,3;UBERON:0007280,1.22e-15,3;UBERON:0003103,3.85e-15,68;UBERON:0002079,7.03e-13,1;UBERON:0002084,1.40e-12,1;UBERON:0002082,1.40e-12,1;UBERON:0010226,1.40e-12,1;UBERON:0002146,1.57e-12,1;UBERON:0005623,1.57e-12,1;UBERON:0002135,3.45e-12,1;UBERON:0000948,1.24e-11,24;UBERON:0005498,1.24e-11,24;UBERON:0004140,1.24e-11,24;UBERON:0009881,1.24e-11,24;UBERON:0004141,1.24e-11,24;UBERON:0003084,1.24e-11,24;UBERON:0007005,1.24e-11,24;UBERON:0004139,1.24e-11,24;UBERON:0004291,1.24e-11,24;UBERON:0004797,3.24e-07,7;UBERON:0002081,4.56e-07,2;UBERON:0010227,4.56e-07,2;UBERON:0001009,5.40e-07,112;UBERON:0001281,7.20e-07,2;UBERON:0003497,7.20e-07,2;UBERON:0003909,7.20e-07,2;UBERON:0003835,7.20e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0.495065411840187,0,0.672325146451775,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0,0.485168122375632,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0.324547393654683,0.348259474598534,0.797747763113191,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0,0.71153252537342,0,0.805658634218294,0,0.976248230192678,0,0,0.446498641420399,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.25326102332916,0,0.286836620748814,0.709336764396714,0,0,0,0,0.269421344139376,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.245668634623536,0,0,0,0,0.718618141816238,0.168336113954066,0,0.277064115484183,0,0,0,0.226864366320042,0,0.640672166455702,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0.860413786167011,0,0.132529768321485,0,0,0,0,0,0,0,0.464367928031979,0,0,0.337169380156203,0,0,0,0,0.134831308160164,0.392442930250692,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0,0.219500570817251,1.1240175325762,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0.702012795417713,0.445893486866185,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0.116210378459959,0.362578348774867,0.40101294060657,0.0920809889358963,0,0,0.262248829918848,0,0,0,0,0,1.13733384070897,0,0,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0.330037999682352,0,0,0,0,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0,0,0.563391205064483,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0.635020748171649,0.649243880549111,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0,0.278406173895242,0,0.270455678475983,0.99921590399346,0,0,0.146508179271894,0,0.111443384277478,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0.897576444097721,0.217294743844016,0,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.978323094660449,0.242780379534093,0,0,0,0,0.60129367765797,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0,0.693373365065693,0.173559738335131,0,0,0.17472666824203,0,0,0,0.0821154570532092,0.0969890164884194,0.0882561266915003,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0.523014231561666,0.101998217636322,0.288950589901519,0,0.136905378891993,0,0,0,1.11712960508902,1.83328339209347,0,1.99679000498991,3.004582336956,3.34757186162809,3.56072404179649,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,2.32140586367385,0.0607495566580247,0,0,0.0524545881349981,0,0,0,4.2881719582402,1.98627591109629,0,1.08599920350743,0.864221491201268,0,1.19730191562487,0,0,0.453248366080503,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0.521745061811734,0,0.380805212168795,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.196295437002051,0.471878893390961,0,0.115525666150338,0,0,0,0.225630985047772,0,0,0.523813388962845,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354809480650555,0,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.170426809518315,0,0.4582137370881,0.31020638566432,0,0.223710863595585,0,0.487671699929078,0,1.02662806856247,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0.705789743431384,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.253397002022874,0,0,0,0,0.303114792872958,0,0,0,0.63970194570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| ||
|short_description=p25@GSN | |||
}} | }} |
Latest revision as of 20:44, 24 September 2015
Short description: | p25@GSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_GSN_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -35bp_to_ENST00000545652, uc011lyi.1_5end |
EntrezGene: | GSN |
HGNC: | 4620 |
UniProt: | F5H1A8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 5.73e-07 | 2 |
immature CD1a-positive Langerhans cell | 5.73e-07 | 2 |
endothelial cell of sinusoid | 7.20e-07 | 2 |
endothelial cell of hepatic sinusoid | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.25e-26 | 27 |
cardiac chamber | 3.98e-16 | 3 |
valve | 1.22e-15 | 3 |
cardiac mesenchyme | 1.22e-15 | 3 |
cardial valve | 1.22e-15 | 3 |
tunica intima | 1.22e-15 | 3 |
heart layer | 1.22e-15 | 3 |
endocardium | 1.22e-15 | 3 |
endocardial cushion | 1.22e-15 | 3 |
presumptive endocardium | 1.22e-15 | 3 |
compound organ | 3.85e-15 | 68 |
left cardiac atrium | 7.03e-13 | 1 |
heart left ventricle | 1.40e-12 | 1 |
cardiac ventricle | 1.40e-12 | 1 |
future cardiac ventricle | 1.40e-12 | 1 |
pulmonary valve | 1.57e-12 | 1 |
semi-lunar valve | 1.57e-12 | 1 |
mitral valve | 3.45e-12 | 1 |
heart | 1.24e-11 | 24 |
primitive heart tube | 1.24e-11 | 24 |
primary heart field | 1.24e-11 | 24 |
anterior lateral plate mesoderm | 1.24e-11 | 24 |
heart tube | 1.24e-11 | 24 |
heart primordium | 1.24e-11 | 24 |
cardiac mesoderm | 1.24e-11 | 24 |
cardiogenic plate | 1.24e-11 | 24 |
heart rudiment | 1.24e-11 | 24 |
blood vessel layer | 3.24e-07 | 7 |
cardiac atrium | 4.56e-07 | 2 |
future cardiac atrium | 4.56e-07 | 2 |
circulatory system | 5.40e-07 | 112 |
hepatic sinusoid | 7.20e-07 | 2 |
abdomen blood vessel | 7.20e-07 | 2 |
sinusoid | 7.20e-07 | 2 |
abdominal segment blood vessel | 7.20e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.42e-23 | 2 |
vascular disease | 1.25e-12 | 1 |
ischemia | 1.25e-12 | 1 |
extrinsic cardiomyopathy | 1.25e-12 | 1 |
myocardial ischemia | 1.25e-12 | 1 |
myocardial infarction | 1.25e-12 | 1 |
cardiovascular system disease | 2.76e-12 | 4 |