FFCP PHASE1:Hg19::chr2:220325416..220325429,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10290 | |EntrezGene=10290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16901 | |HGNC=16901 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-58bp_to_ENST00000396688_5end | |association_with_transcript=-58bp_to_ENST00000396688_5end | ||
|cluster_id=chr2:220325416..220325429,+ | |||
|coexpression_cluster_id=C4190 | |||
|description=CAGE_peak_12_at_SPEG_5end | |description=CAGE_peak_12_at_SPEG_5end | ||
|id=chr2:220325416..220325429,+ | |id=chr2:220325416..220325429,+ | ||
|ontology_enrichment_celltype=CL:0000243!7.99e-08!15;CL:0000125!7.99e-08!15;CL:0000030!7.99e-08!15;CL:0000339!7.99e-08!15;CL:0000306!6.26e-07!4;CL:0002222!6.26e-07!4;CL:0002224!6.26e-07!4 | |ontology_enrichment_celltype=CL:0000243!7.99e-08!15;CL:0000125!7.99e-08!15;CL:0000030!7.99e-08!15;CL:0000339!7.99e-08!15;CL:0000306!6.26e-07!4;CL:0002222!6.26e-07!4;CL:0002224!6.26e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000306;3.94e-15;4!CL:0002222;3.94e-15;4!CL:0002224;3.94e-15;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,3.94e-15,4;CL:0002222,3.94e-15,4;CL:0002224,3.94e-15,4 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.55e-16;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;1.66e-15;1!DOID:114;2.07e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,2.38e-15,1;DOID:114,2.00e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-12!115;UBERON:0010077!6.26e-07!4;UBERON:0005389!6.26e-07!4;UBERON:0000484!6.26e-07!4;UBERON:0002546!6.26e-07!4;UBERON:0000965!6.26e-07!4;UBERON:0001803!6.26e-07!4;UBERON:0003073!6.26e-07!4;UBERON:0005426!6.26e-07!4;UBERON:0007625!6.27e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;1.66e-15;1!UBERON:0002134;1.66e-15;1!UBERON:0005208;1.66e-15;1!UBERON:0004145;1.66e-15;1!UBERON:0005946;1.66e-15;1!UBERON:0005965;1.66e-15;1!UBERON:0002078;1.66e-15;1!UBERON:0010077;3.94e-15;4!UBERON:0005389;3.94e-15;4!UBERON:0000484;3.94e-15;4!UBERON:0000965;3.94e-15;4!UBERON:0001803;3.94e-15;4!UBERON:0007100;2.00e-09;25!UBERON:0002081;2.07e-08;2!UBERON:0002133;2.07e-08;2!UBERON:0001155;2.56e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.16e-15,1;UBERON:0005208,1.16e-15,1;UBERON:0005946,1.16e-15,1;UBERON:0005965,1.16e-15,1;UBERON:0002078,1.16e-15,1;UBERON:0006834,3.66e-15,1;UBERON:0010077,3.94e-15,4;UBERON:0005389,3.94e-15,4;UBERON:0000484,3.94e-15,4;UBERON:0002546,3.94e-15,4;UBERON:0000965,3.94e-15,4;UBERON:0001803,3.94e-15,4;UBERON:0003073,3.94e-15,4;UBERON:0005426,3.94e-15,4;UBERON:0007100,8.07e-09,27;UBERON:0002081,1.73e-08,2;UBERON:0002133,1.73e-08,2;UBERON:0010227,1.73e-08,2;UBERON:0000076,5.00e-08,8;UBERON:0001155,2.68e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0,0.246242116153576,0,0.626909442956176,0.572471974262113,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0.201504196455281,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0.464775771478074,0.10366105501537,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,1.44331342025273,0.463721619900307,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.457847324091717,0.495056999523528,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0.563391205064483,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635020748171649,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0,0,0,0,0,0.923403102045565,0.227884111694002,0.46112780877612,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,3.98104772431402,0.796118080530053,1.22206028986725,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775912131907355,0,0.225980740780532,0,0,0,0,0.0801588202515337,0.640358984218058,0,0,0,0,0,0,0,1.35904206073614,0.418411385249333,0,1.15580235960608,0,0,0,0.429765441419957,0,0.558564802544508,0.916641696046735,1.43574604915363,0.599037001496973,1.28767814440971,1.56220020209311,4.63565960158411,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0.714695326373367,0.662091970365432,0,0.542999601753713,0.864221491201268,0.653174720218818,1.19730191562487,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.300515217994437,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.438568099157414,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.413373593002368,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,1.20041606606193,0,0,0,0,0.470958557103084,0,0,0.913158720509496,0,0,0.142953088353313,0.632054446930906,0,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0.219881033490858,0,0.540219106755613,0.437119121007915,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.252332849670158,0,0.380095503034311,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0,0,0,0,1.1001729976458,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,0,0.730310090387373,0,0.246242116153576,0,0.626909442956176,0.572471974262113,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0.201504196455281,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0.464775771478074,0.10366105501537,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,1.44331342025273,0.463721619900307,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.457847324091717,0.495056999523528,0.574265537996172,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0.318203247925937,0,0.179872457583315,0.54907405947211,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0.563391205064483,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.635020748171649,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0,0,0,0,0,0.923403102045565,0.227884111694002,0.46112780877612,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,3.98104772431402,0.796118080530053,1.22206028986725,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775912131907355,0,0.225980740780532,0,0,0,0,0.0801588202515337,0.640358984218058,0,0,0,0,0,0,0,1.35904206073614,0.418411385249333,0,1.15580235960608,0,0,0,0.429765441419957,0,0.558564802544508,0.916641696046735,1.43574604915363,0.599037001496973,1.28767814440971,1.56220020209311,4.63565960158411,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0.121499113316049,0,0,0.104909176269996,0,0,0,0.714695326373367,0.662091970365432,0,0.542999601753713,0.864221491201268,0.653174720218818,1.19730191562487,0,0.170388021785422,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0,0.138348634936231,0,0,0,0,0,0,0.149254802886874,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.300515217994437,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.438568099157414,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0.413373593002368,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,1.20041606606193,0,0,0,0,0.470958557103084,0,0,0.913158720509496,0,0,0.142953088353313,0.632054446930906,0,0.173858272302579,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0.219881033490858,0,0.540219106755613,0.437119121007915,0,0.980593287015622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0.5290268405154,0,0,0,0.252332849670158,0,0.380095503034311,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.215166616178029,0,0,0,0,0,0,1.1001729976458,0.406896178315738,0,0,0 | ||
|short_description=p12@SPEG | |short_description=p12@SPEG | ||
}} | }} |
Latest revision as of 21:26, 24 September 2015
Short description: | p12@SPEG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SPEG_5end |
Coexpression cluster: | C4190_colon_heart_smooth_left_mesothelioma_esophagus_uterus |
Association with transcript: | -58bp_to_ENST00000396688_5end |
EntrezGene: | SPEG |
HGNC: | 16901 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 3.94e-15 | 4 |
vertebrate lens cell | 3.94e-15 | 4 |
lens epithelial cell | 3.94e-15 | 4 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 1.16e-15 | 1 |
right atrium valve | 1.16e-15 | 1 |
outflow tract of atrium | 1.16e-15 | 1 |
outflow part of right atrium | 1.16e-15 | 1 |
right cardiac atrium | 1.16e-15 | 1 |
uterus or analog | 3.66e-15 | 1 |
cuboidal epithelium | 3.94e-15 | 4 |
transparent eye structure | 3.94e-15 | 4 |
simple cuboidal epithelium | 3.94e-15 | 4 |
cranial placode | 3.94e-15 | 4 |
lens of camera-type eye | 3.94e-15 | 4 |
epithelium of lens | 3.94e-15 | 4 |
lens placode | 3.94e-15 | 4 |
lens vesicle | 3.94e-15 | 4 |
primary circulatory organ | 8.07e-09 | 27 |
cardiac atrium | 1.73e-08 | 2 |
atrioventricular valve | 1.73e-08 | 2 |
future cardiac atrium | 1.73e-08 | 2 |
external ectoderm | 5.00e-08 | 8 |
colon | 2.68e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 2.38e-15 | 1 |
heart disease | 2.00e-08 | 2 |