FFCP PHASE1:Hg19::chr9:127054217..127054252,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10783 | |EntrezGene=10783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7749 | |HGNC=7749 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HC98 | |UniProt=Q9HC98 | ||
|association_with_transcript=0bp_to_ENST00000394199,ENST00000546191,NM_001166170,NM_001166171,uc004boi.2_5end | |association_with_transcript=0bp_to_ENST00000394199,ENST00000546191,NM_001166170,NM_001166171,uc004boi.2_5end | ||
|cluster_id=chr9:127054217..127054252,+ | |||
|coexpression_cluster_id=C4799 | |||
|description=CAGE_peak_7_at_NEK6_5end | |description=CAGE_peak_7_at_NEK6_5end | ||
|id=chr9:127054217..127054252,+ | |id=chr9:127054217..127054252,+ | ||
|ontology_enrichment_celltype=CL:0000763!4.11e-32!112;CL:0000049!4.11e-32!112;CL:0000557!8.05e-25!71;CL:0000988!4.33e-24!182;CL:0002032!4.88e-24!165;CL:0000837!4.88e-24!165;CL:0000839!1.19e-23!70;CL:0000037!6.19e-23!172;CL:0000566!6.19e-23!172;CL:0000766!5.80e-22!76;CL:0002009!1.85e-20!65;CL:0002194!8.37e-19!63;CL:0000576!8.37e-19!63;CL:0000040!8.37e-19!63;CL:0000559!8.37e-19!63;CL:0002031!6.46e-16!124;CL:0000738!8.39e-16!140;CL:0002057!3.10e-11!42;CL:0002087!4.09e-11!119;CL:0000990!5.29e-10!8;CL:0000860!5.78e-10!45;CL:0002274!6.45e-08!5;CL:0000457!6.45e-08!5;CL:0002191!6.45e-08!5;CL:0000097!6.45e-08!5;CL:0000831!6.45e-08!5;CL:0002028!6.45e-08!5;CL:0000840!6.72e-08!5;CL:0001029!6.72e-08!5;CL:0000451!9.75e-08!10 | |ontology_enrichment_celltype=CL:0000763!4.11e-32!112;CL:0000049!4.11e-32!112;CL:0000557!8.05e-25!71;CL:0000988!4.33e-24!182;CL:0002032!4.88e-24!165;CL:0000837!4.88e-24!165;CL:0000839!1.19e-23!70;CL:0000037!6.19e-23!172;CL:0000566!6.19e-23!172;CL:0000766!5.80e-22!76;CL:0002009!1.85e-20!65;CL:0002194!8.37e-19!63;CL:0000576!8.37e-19!63;CL:0000040!8.37e-19!63;CL:0000559!8.37e-19!63;CL:0002031!6.46e-16!124;CL:0000738!8.39e-16!140;CL:0002057!3.10e-11!42;CL:0002087!4.09e-11!119;CL:0000990!5.29e-10!8;CL:0000860!5.78e-10!45;CL:0002274!6.45e-08!5;CL:0000457!6.45e-08!5;CL:0002191!6.45e-08!5;CL:0000097!6.45e-08!5;CL:0000831!6.45e-08!5;CL:0002028!6.45e-08!5;CL:0000840!6.72e-08!5;CL:0001029!6.72e-08!5;CL:0000451!9.75e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.87e-18;5!CL:0000235;1.22e-14;6!CL:0000840;1.31e-13;5!CL:0000473;3.47e-13;39!CL:0000234;3.47e-13;39!CL:0000990;1.05e-12;8!CL:0000766;8.73e-11;69!CL:0000451;2.87e-10;10!CL:0000163;4.60e-10;9!CL:0002586;6.60e-10;3!CL:0000763;1.11e-09;100!CL:0000860;7.30e-08;33!CL:0002057;7.30e-08;33!CL:0000149;1.54e-07;4!CL:0001014;5.15e-07;2!CL:0001016;5.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.56e-40,108;CL:0000049,7.56e-40,108;CL:0002032,4.80e-35,161;CL:0000837,4.80e-35,161;CL:0000037,4.00e-33,168;CL:0000557,6.53e-31,67;CL:0000988,7.05e-31,177;CL:0000839,8.08e-27,66;CL:0002031,1.36e-24,120;CL:0000766,4.74e-24,72;CL:0000738,3.33e-22,136;CL:0002009,1.22e-21,61;CL:0002194,1.73e-18,59;CL:0000576,1.73e-18,59;CL:0000040,1.73e-18,59;CL:0000559,1.73e-18,59;CL:0000097,1.78e-18,5;CL:0002028,1.78e-18,5;CL:0002087,8.44e-15,115;CL:0000235,1.36e-14,6;CL:0000840,1.16e-13,5;CL:0001029,1.16e-13,5;CL:0000990,9.40e-13,8;CL:0000473,1.39e-11,48;CL:0000234,1.39e-11,48;CL:0000451,2.61e-10,10;CL:0000163,4.48e-10,9;CL:0000134,6.10e-10,354;CL:0002586,7.15e-10,3;CL:0002320,1.54e-09,361;CL:0000219,3.90e-08,386;CL:0000149,1.64e-07,4;CL:0001014,3.87e-07,2;CL:0001016,3.87e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000049;1.85e-13;108 | |||
|ontology_enrichment_disease=DOID:8692!1.15e-09!31;DOID:1240!1.98e-07!39;DOID:2531!4.37e-07!51;DOID:0060083!4.37e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.34e-15;31!DOID:1240;4.15e-10;39!DOID:2531;5.19e-09;51!DOID:0060083;5.19e-09;51!DOID:74;5.15e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.97e-16,31;DOID:1240,3.52e-12,39;DOID:2531,1.19e-11,51;DOID:0060083,1.19e-11,51;DOID:74,3.52e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.54e-23!80;UBERON:0001474!6.30e-23!86;UBERON:0002390!9.85e-21!102;UBERON:0003061!9.85e-21!102;UBERON:0004765!8.67e-19!101;UBERON:0001434!8.67e-19!101;UBERON:0002193!5.74e-18!112;UBERON:0002405!1.52e-16!115;UBERON:0001049!4.00e-09!57;UBERON:0005068!4.00e-09!57;UBERON:0006241!4.00e-09!57;UBERON:0007135!4.00e-09!57;UBERON:0005743!1.04e-08!86;UBERON:0007023!3.87e-08!115;UBERON:0002204!5.11e-08!167;UBERON:0003075!8.59e-08!86;UBERON:0007284!8.59e-08!86;UBERON:0002346!5.03e-07!90;UBERON:0000073!5.93e-07!94;UBERON:0001016!5.93e-07!94;UBERON:0002616!7.28e-07!59;UBERON:0001017!8.94e-07!82 | |ontology_enrichment_uberon=UBERON:0002371!1.54e-23!80;UBERON:0001474!6.30e-23!86;UBERON:0002390!9.85e-21!102;UBERON:0003061!9.85e-21!102;UBERON:0004765!8.67e-19!101;UBERON:0001434!8.67e-19!101;UBERON:0002193!5.74e-18!112;UBERON:0002405!1.52e-16!115;UBERON:0001049!4.00e-09!57;UBERON:0005068!4.00e-09!57;UBERON:0006241!4.00e-09!57;UBERON:0007135!4.00e-09!57;UBERON:0005743!1.04e-08!86;UBERON:0007023!3.87e-08!115;UBERON:0002204!5.11e-08!167;UBERON:0003075!8.59e-08!86;UBERON:0007284!8.59e-08!86;UBERON:0002346!5.03e-07!90;UBERON:0000073!5.93e-07!94;UBERON:0001016!5.93e-07!94;UBERON:0002616!7.28e-07!59;UBERON:0001017!8.94e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001781;6.60e-10;3!UBERON:0001782;6.60e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.96e-26,76;UBERON:0001474,5.43e-24,82;UBERON:0002405,4.11e-22,93;UBERON:0004765,3.05e-21,90;UBERON:0002390,1.29e-20,98;UBERON:0003061,1.29e-20,98;UBERON:0001434,2.00e-18,100;UBERON:0002193,4.82e-18,108;UBERON:0001782,7.15e-10,3;UBERON:0005424,7.15e-10,3;UBERON:0002384,1.09e-09,371;UBERON:0002204,2.31e-08,167;UBERON:0001781,1.64e-07,4 | |||
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| ||
|short_description=p7@NEK6 | |short_description=p7@NEK6 | ||
}} | }} |
Latest revision as of 00:18, 25 September 2015
Short description: | p7@NEK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NEK6_5end |
Coexpression cluster: | C4799_Mast_acute_Monocytederived_xeroderma_plasma_b_migratory |
Association with transcript: | 0bp_to_ENST00000394199, ENST00000546191, NM_001166170, NM_001166171, uc004boi.2_5end |
EntrezGene: | NEK6 |
HGNC: | 7749 |
UniProt: | Q9HC98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.96e-26 | 76 |
bone element | 5.43e-24 | 82 |
immune system | 4.11e-22 | 93 |
skeletal element | 3.05e-21 | 90 |
hematopoietic system | 1.29e-20 | 98 |
blood island | 1.29e-20 | 98 |
skeletal system | 2.00e-18 | 100 |
hemolymphoid system | 4.82e-18 | 108 |
pigmented layer of retina | 7.15e-10 | 3 |
presumptive retinal pigmented epithelium | 7.15e-10 | 3 |
connective tissue | 1.09e-09 | 371 |
musculoskeletal system | 2.31e-08 | 167 |
layer of retina | 1.64e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.97e-16 | 31 |
leukemia | 3.52e-12 | 39 |
hematologic cancer | 1.19e-11 | 51 |
immune system cancer | 1.19e-11 | 51 |
hematopoietic system disease | 3.52e-07 | 2 |