FFCP PHASE1:Hg19::chr11:8986279..8986293,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56674 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1168 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=26bp_to_ENST00000534025_5end | |||
|cluster_id=chr11:8986279..8986293,- | |||
|description=CAGE_peak_3_at_TMEM9B_5end | |||
|id=chr11:8986279..8986293,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;2.84e-07;3!CL:0000067;2.84e-07;3!CL:0005012;2.84e-07;3!CL:0002304;2.84e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.10e-07,3;CL:0000067,3.10e-07,3;CL:0005012,3.10e-07,3;CL:0002304,3.10e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.25e-08!143;DOID:305!9.54e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.35e-16!86;UBERON:0000073!7.21e-16!94;UBERON:0001016!7.21e-16!94;UBERON:0001017!6.57e-15!82;UBERON:0003075!8.02e-15!86;UBERON:0007284!8.02e-15!86;UBERON:0001049!1.29e-14!57;UBERON:0005068!1.29e-14!57;UBERON:0006241!1.29e-14!57;UBERON:0007135!1.29e-14!57;UBERON:0002616!2.96e-13!59;UBERON:0000955!3.49e-13!69;UBERON:0006238!3.49e-13!69;UBERON:0002346!4.19e-13!90;UBERON:0002780!8.02e-13!41;UBERON:0001890!8.02e-13!41;UBERON:0006240!8.02e-13!41;UBERON:0003080!4.60e-12!42;UBERON:0003056!9.94e-12!61;UBERON:0001893!6.06e-10!34;UBERON:0002020!8.13e-10!34;UBERON:0003528!8.13e-10!34;UBERON:0002791!1.41e-09!33;UBERON:0001869!2.35e-09!32;UBERON:0000033!3.65e-08!123;UBERON:0000956!4.26e-08!25;UBERON:0000203!4.26e-08!25;UBERON:0004121!8.29e-08!169;UBERON:0000153!2.40e-07!129;UBERON:0007811!2.40e-07!129;UBERON:0000924!4.66e-07!173;UBERON:0006601!4.66e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.57e-07;41!UBERON:0001890;1.57e-07;41!UBERON:0001778;2.84e-07;3!UBERON:0001775;2.84e-07;3!UBERON:0000073;4.91e-07;53!UBERON:0002616;4.91e-07;53!UBERON:0000956;6.41e-07;25!UBERON:0000203;6.41e-07;25!UBERON:0002791;6.82e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.47e-12,56;UBERON:0005068,2.47e-12,56;UBERON:0006241,2.47e-12,56;UBERON:0007135,2.47e-12,56;UBERON:0001017,2.65e-12,81;UBERON:0001016,2.85e-11,89;UBERON:0003075,3.41e-11,82;UBERON:0007284,3.41e-11,82;UBERON:0000073,6.42e-11,53;UBERON:0002616,6.42e-11,53;UBERON:0002346,2.58e-10,86;UBERON:0003056,3.03e-09,61;UBERON:0000955,4.95e-09,68;UBERON:0006238,4.95e-09,68;UBERON:0002780,8.33e-09,41;UBERON:0001890,8.33e-09,41;UBERON:0003080,8.33e-09,41;UBERON:0006240,8.33e-09,41;UBERON:0010314,4.02e-08,132;UBERON:0010371,2.87e-07,104;UBERON:0001778,3.10e-07,3;UBERON:0001775,3.10e-07,3;UBERON:0000956,9.10e-07,25;UBERON:0000203,9.10e-07,25 | |||
|phase1_expression=1.2717486548939,0.856402095563933,0.422863212287913,1.0007329835313,0,0.872338524100369,0,0,0,0.737201809504527,1.39560233594486,1.31064823278103,0.263766978228454,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0,1.35433163884467,0.612002073732759,0,1.43117993565528,1.64249310087461,1.38096903554283,1.45185470921107,2.21671591514854,2.36132343941038,0,1.15148819429164,0.619264493264304,0,0,0,0.387336002901508,0.284338464974843,0,0,0,0,0,0.32389366601898,0.77272670290256,0,0,0.242584061187816,0,0.411167888021826,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0.182664153764634,1.75996244461323,0,0.889509253863555,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0,0.196709770113833,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,4.82127567536746,3.54767035940102,2.19586964232815,1.0478326039817,0.364295288292542,0,0,0.174129737299267,0.398873881556595,0,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0.402829317109147,0,0.24406205754817,0,0,0.17859945656816,0,0.225222960966644,1.53316637465883,0,0,0,0,0,0.993943903390637,0.25326102332916,0,0.286836620748814,0.354668382198357,1.12135520028461,1.06748995729705,1.2333377420858,0,0,0.163461903113459,0.454072282934794,0,0,0.312160076830321,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0.340296549480063,0,0.213557388818567,0.635795703478686,0.300091096084402,0.412210116953756,0,0.18611685633159,0.168776332241266,0.584622030967192,0,0.276149695926898,0.323292113637624,1.42003837006646,0.604512589365842,0.67824236924195,0,0,0,0,0.132529768321485,0.813357600086629,0.725627385107593,0.504641701751257,1.09493207722749,0,0,0,0,0,1.53798840051797,0.337169380156203,1.68707720918437,0.441175890929576,0.871517776369625,0.474541238222193,0.674156540800822,0.392442930250692,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0,0,1.72183813960359,0.514703430895577,0.109750285408626,0,0.100528972411631,0.462942225792648,0,0,0,2.20267769452646,0.469634776943287,0.433099343283221,0,0.380508304469197,0,0.858486162094873,0.246217006087397,0.936017060556951,0,0.93733833986777,0.16798212819886,0.141775097242386,0.447792613514241,0.581267877027924,0,0.492663237895943,0.264145302039678,0,0,0,0.317489471460845,0.381988425558278,0,0,0.616964956219941,1.50171528921959,0.571652865261156,0.672786506072164,0.87192013766656,0.4400297149257,0.904902010304444,0,0,0.531876233169741,4.16029747645464,0,0,0.266422179016099,0.285955987316295,0,0,0,0.355391948742546,0,0.904318131178758,0,0.299918973546171,1.2162378064119,0,2.10833939483032,0.958499421966331,0,0,0.579125226670317,1.02738161275192,0.716243852959582,0.224170287987055,0.197030760201927,0.215627574859517,0.898401253958239,5.84417635711666,2.60279707715243,3.09315525111078,0.670065061337395,0,0,0,0,0,0.500170521059677,0,0.207970861530807,0.535286966391485,0.315404830067869,0.585707074963566,0,0,0,0.664225598535437,0.368738337083406,0.173767228936166,0.587403472388222,0.343143423810856,0.206768026122887,0,0.320182673410333,0.909382714338778,0,0.30239029332968,0,0.306923946576125,0,0.384417447767103,1.53512174720011,0.804269605718038,0,0.462629081407967,1.42049380250502,0.492762936082855,0.519254429183621,0.464841513839837,1.57117284469109,0.40101294060657,0,0.459257792658427,0.182091168006717,0.131124414959424,0,0.308061348417659,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0.215915916102139,0,1.62567862526312,0.501689773854853,0.764628819135115,1.66215201785745,0.895499018888713,0,0,0.512900250232778,0.984043937099117,0.650756789328606,0.206082023295445,0.183138929636687,0.082509499920588,0,0,3.21367859688319,0.290012154876366,0.308097234229289,0.460511024178389,0.275673144969061,0.322260734604821,0.145016693914229,0.93749290157711,0.445160178233687,0.165284915360978,0,0,0,0.464845549297286,0,0.6970372701606,0.616067160352178,0,0,0.18532421910392,0.286249773483982,0.372158369359667,0,0.571890581771475,1.02359116524534,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0.975267478179181,0.731140468893853,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0,0,0,0.379473173765715,0,0.192444225451024,0,0,0.282431402330337,0.86101074534246,0,0,0.459446800413919,0,0,0,0,0,0,0,0,4.80708320073629,0.962479855263359,0,0.185803175125719,0.432807638929335,0.142283686696828,0,0.59873811429845,0.766021480529467,0.211673582723883,0,0,0,0.313359791546046,2.50634477090067,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0.223676107892416,0,0,2.22724939116194,0,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| |||
|short_description=p3@TMEM9B | |||
}} |
Latest revision as of 00:31, 25 September 2015
Short description: | p3@TMEM9B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM9B_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000534025_5end |
EntrezGene: | TMEM9B |
HGNC: | 1168 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.10e-07 | 3 |
ciliated epithelial cell | 3.10e-07 | 3 |
multi-ciliated epithelial cell | 3.10e-07 | 3 |
non-pigmented ciliary epithelial cell | 3.10e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neural tube | 2.47e-12 | 56 |
neural rod | 2.47e-12 | 56 |
future spinal cord | 2.47e-12 | 56 |
neural keel | 2.47e-12 | 56 |
central nervous system | 2.65e-12 | 81 |
nervous system | 2.85e-11 | 89 |
neural plate | 3.41e-11 | 82 |
presumptive neural plate | 3.41e-11 | 82 |
regional part of nervous system | 6.42e-11 | 53 |
regional part of brain | 6.42e-11 | 53 |
neurectoderm | 2.58e-10 | 86 |
pre-chordal neural plate | 3.03e-09 | 61 |
brain | 4.95e-09 | 68 |
future brain | 4.95e-09 | 68 |
regional part of forebrain | 8.33e-09 | 41 |
forebrain | 8.33e-09 | 41 |
anterior neural tube | 8.33e-09 | 41 |
future forebrain | 8.33e-09 | 41 |
structure with developmental contribution from neural crest | 4.02e-08 | 132 |
ecto-epithelium | 2.87e-07 | 104 |
ciliary epithelium | 3.10e-07 | 3 |
ciliary body | 3.10e-07 | 3 |
cerebral cortex | 9.10e-07 | 25 |
pallium | 9.10e-07 | 25 |