FFCP PHASE1:Hg19::chr4:128982430..128982488,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:128982430..128982488,+ to FFCP PHASE1:Hg19::chr4:128982430..128982488,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55132 | |EntrezGene=55132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24704 | |HGNC=24704 | ||
|TSSclassifier=strong | |||
|UniProt=D6RJB0,D6R9W6 | |UniProt=D6RJB0,D6R9W6 | ||
|association_with_transcript=0bp_to_ENST00000508819,ENST00000512292_5end | |||
|cluster_id=chr4:128982430..128982488,+ | |||
|description=CAGE_peak_1_at_LARP1B_5end | |||
|id=chr4:128982430..128982488,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050686!9.65e-13!137;DOID:162!1.04e-12!235;DOID:14566!3.19e-11!239;DOID:8692!4.36e-10!31;DOID:1240!7.07e-10!39;DOID:2531!5.71e-08!51;DOID:0060083!5.71e-08!51;DOID:0050687!1.83e-07!143;DOID:305!5.79e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.52e-10;31!DOID:1240;4.06e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,9.65e-13,137;DOID:162,1.04e-12,235;DOID:14566,3.19e-11,239;DOID:8692,4.36e-10,31;DOID:1240,7.07e-10,39;DOID:2531,5.71e-08,51;DOID:0060083,5.71e-08,51;DOID:0050687,1.83e-07,143;DOID:305,5.79e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001017!4.29e-09!82;UBERON:0007023!7.35e-09!115;UBERON:0000073!2.37e-08!94;UBERON:0001016!2.37e-08!94;UBERON:0005743!2.67e-08!86;UBERON:0001049!3.06e-08!57;UBERON:0005068!3.06e-08!57;UBERON:0006241!3.06e-08!57;UBERON:0007135!3.06e-08!57;UBERON:0003080!3.42e-08!42;UBERON:0002780!6.59e-08!41;UBERON:0001890!6.59e-08!41;UBERON:0006240!6.59e-08!41;UBERON:0000955!7.66e-07!69;UBERON:0006238!7.66e-07!69;UBERON:0002020!9.20e-07!34;UBERON:0003528!9.20e-07!34;UBERON:0002616!9.56e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.62e-09,89;UBERON:0001017,7.73e-09,81;UBERON:0007023,9.56e-09,114;UBERON:0001049,5.68e-08,56;UBERON:0005068,5.68e-08,56;UBERON:0006241,5.68e-08,56;UBERON:0007135,5.68e-08,56;UBERON:0002780,6.59e-08,41;UBERON:0001890,6.59e-08,41;UBERON:0003080,6.59e-08,41;UBERON:0006240,6.59e-08,41;UBERON:0011216,1.09e-07,223;UBERON:0000073,2.12e-07,53;UBERON:0002616,2.12e-07,53;UBERON:0003528,9.20e-07,34;UBERON:0002020,9.20e-07,34 | |||
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| ||
|short_description=p1@LARP1B | |||
}} | }} |
Latest revision as of 02:45, 25 September 2015
Short description: | p1@LARP1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LARP1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508819, ENST00000512292_5end |
EntrezGene: | LARP1B |
HGNC: | 24704 |
UniProt: | D6RJB0D6R9W6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 7.62e-09 | 89 |
central nervous system | 7.73e-09 | 81 |
adult organism | 9.56e-09 | 114 |
neural tube | 5.68e-08 | 56 |
neural rod | 5.68e-08 | 56 |
future spinal cord | 5.68e-08 | 56 |
neural keel | 5.68e-08 | 56 |
regional part of forebrain | 6.59e-08 | 41 |
forebrain | 6.59e-08 | 41 |
anterior neural tube | 6.59e-08 | 41 |
future forebrain | 6.59e-08 | 41 |
organ system subdivision | 1.09e-07 | 223 |
regional part of nervous system | 2.12e-07 | 53 |
regional part of brain | 2.12e-07 | 53 |
brain grey matter | 9.20e-07 | 34 |
gray matter | 9.20e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 9.65e-13 | 137 |
cancer | 1.04e-12 | 235 |
disease of cellular proliferation | 3.19e-11 | 239 |
myeloid leukemia | 4.36e-10 | 31 |
leukemia | 7.07e-10 | 39 |
hematologic cancer | 5.71e-08 | 51 |
immune system cancer | 5.71e-08 | 51 |
cell type cancer | 1.83e-07 | 143 |
carcinoma | 5.79e-07 | 106 |