FFCP PHASE1:Hg19::chr6:138192164..138192180,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7128 | |EntrezGene=7128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11896 | |HGNC=11896 | ||
|TSSclassifier=strong | |||
|UniProt=F5H7A9,F5GYN2,F5H1G3 | |UniProt=F5H7A9,F5GYN2,F5H1G3 | ||
|association_with_transcript=-167bp_to_ENST00000535332,ENST00000535574,ENST00000539356_5end | |association_with_transcript=-167bp_to_ENST00000535332,ENST00000535574,ENST00000539356_5end | ||
|cluster_id=chr6:138192164..138192180,+ | |||
|coexpression_cluster_id=C817 | |||
|description=CAGE_peak_4_at_TNFAIP3_5end | |description=CAGE_peak_4_at_TNFAIP3_5end | ||
|id=chr6:138192164..138192180,+ | |id=chr6:138192164..138192180,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.99e-30!140;CL:0002087!3.13e-22!119;CL:0002031!1.95e-21!124;CL:0000766!1.71e-18!76;CL:0000037!5.44e-18!172;CL:0000566!5.44e-18!172;CL:0000988!1.65e-17!182;CL:0002032!1.89e-17!165;CL:0000837!1.89e-17!165;CL:0002057!3.08e-16!42;CL:0000557!1.12e-14!71;CL:0002009!1.76e-14!65;CL:0000860!3.79e-14!45;CL:0002194!2.03e-13!63;CL:0000576!2.03e-13!63;CL:0000040!2.03e-13!63;CL:0000559!2.03e-13!63;CL:0000839!3.51e-13!70;CL:0000048!3.45e-10!430;CL:0000723!5.39e-10!436;CL:0000763!7.08e-10!112;CL:0000049!7.08e-10!112;CL:0000034!2.32e-09!444;CL:0000359!2.60e-08!32;CL:0000542!4.63e-08!53;CL:0000051!4.63e-08!53;CL:0000838!9.58e-08!52;CL:0000134!2.93e-07!358;CL:0000990!4.75e-07!8;CL:0000094!9.92e-07!8 | |ontology_enrichment_celltype=CL:0000738!2.99e-30!140;CL:0002087!3.13e-22!119;CL:0002031!1.95e-21!124;CL:0000766!1.71e-18!76;CL:0000037!5.44e-18!172;CL:0000566!5.44e-18!172;CL:0000988!1.65e-17!182;CL:0002032!1.89e-17!165;CL:0000837!1.89e-17!165;CL:0002057!3.08e-16!42;CL:0000557!1.12e-14!71;CL:0002009!1.76e-14!65;CL:0000860!3.79e-14!45;CL:0002194!2.03e-13!63;CL:0000576!2.03e-13!63;CL:0000040!2.03e-13!63;CL:0000559!2.03e-13!63;CL:0000839!3.51e-13!70;CL:0000048!3.45e-10!430;CL:0000723!5.39e-10!436;CL:0000763!7.08e-10!112;CL:0000049!7.08e-10!112;CL:0000034!2.32e-09!444;CL:0000359!2.60e-08!32;CL:0000542!4.63e-08!53;CL:0000051!4.63e-08!53;CL:0000838!9.58e-08!52;CL:0000134!2.93e-07!358;CL:0000990!4.75e-07!8;CL:0000094!9.92e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.25e-16;33!CL:0002057;6.25e-16;33!CL:0000473;2.33e-15;39!CL:0000234;2.33e-15;39!CL:0000766;7.13e-11;69!CL:0000094;1.82e-10;8!CL:0002087;2.01e-10;104!CL:0000990;2.01e-09;8!CL:0000081;2.20e-09;11!CL:0000738;3.88e-09;136!CL:0000624;7.18e-09;6!CL:0000453;2.65e-08;5!CL:0000576;2.68e-08;48!CL:0000359;1.72e-07;32!CL:0000451;2.21e-07;10!CL:0000542;7.84e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.34e-44,136;CL:0000988,2.17e-32,177;CL:0002031,4.38e-32,120;CL:0000037,2.23e-31,168;CL:0002087,3.69e-31,115;CL:0002032,1.44e-30,161;CL:0000837,1.44e-30,161;CL:0000766,1.77e-25,72;CL:0000557,1.44e-19,67;CL:0000473,5.03e-19,48;CL:0000234,5.03e-19,48;CL:0002009,2.62e-18,61;CL:0000763,1.32e-17,108;CL:0000049,1.32e-17,108;CL:0000839,1.91e-17,66;CL:0000860,8.30e-17,42;CL:0002057,8.30e-17,42;CL:0002194,1.28e-16,59;CL:0000576,1.28e-16,59;CL:0000040,1.28e-16,59;CL:0000559,1.28e-16,59;CL:0000048,1.34e-16,427;CL:0000723,6.29e-16,433;CL:0000034,1.02e-15,441;CL:0000134,4.98e-13,354;CL:0000838,9.30e-13,52;CL:0000542,2.30e-12,53;CL:0000051,2.30e-12,53;CL:0002320,2.80e-12,361;CL:0000094,1.73e-10,8;CL:0000219,1.07e-09,386;CL:0000081,2.11e-09,11;CL:0000990,2.20e-09,8;CL:0000624,8.77e-09,6;CL:0000453,2.88e-08,5;CL:0000359,1.46e-07,32;CL:0000451,2.38e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;3.31e-13;42!CL:0000051;7.84e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;8.57e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.43e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.59e-17!112;UBERON:0002390!5.20e-15!102;UBERON:0003061!5.20e-15!102;UBERON:0002405!1.62e-14!115;UBERON:0002371!8.79e-13!80;UBERON:0003081!4.68e-11!216;UBERON:0001474!1.34e-10!86;UBERON:0002204!5.96e-09!167;UBERON:0004573!1.04e-08!33;UBERON:0004571!1.04e-08!33;UBERON:0001637!4.39e-08!42;UBERON:0003509!4.39e-08!42;UBERON:0004572!4.39e-08!42;UBERON:0004765!1.22e-07!101;UBERON:0001434!1.22e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.41e-07;33!UBERON:0004571;2.41e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.95e-24,108;UBERON:0002405,7.83e-23,93;UBERON:0002390,2.90e-21,98;UBERON:0003061,2.90e-21,98;UBERON:0002371,6.29e-17,76;UBERON:0003081,6.38e-16,203;UBERON:0001474,7.62e-15,82;UBERON:0004765,1.57e-12,90;UBERON:0002384,2.87e-11,371;UBERON:0001434,3.32e-10,100;UBERON:0002204,6.34e-10,167;UBERON:0000926,7.52e-09,315;UBERON:0004120,7.52e-09,315;UBERON:0006603,7.52e-09,315;UBERON:0004573,1.75e-08,33;UBERON:0004571,1.75e-08,33 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,1.80808358407193,0,0.975865597581014,0,0,0,0,0,0.251085279189606,14.2128934691189,15.10650845879,13.6956759485802,1.18009283054671,5.75744097145819,2.01260960310899,0,0,0,0,1.13735385989937,0,7.75593571944628,7.82123345133553,5.4252717678963,0,0,0.257575567634187,0.436194716338694,0,0.727752183563449,9.52959051313307,5.34518254428373,8.3620720141678,6.61692502340946,4.35473201099471,9.22280696565482,24.8216890130365,20.0100251910986,24.3767675869815,3.38836211176688,3.82068610080984,8.09004544002305,12.8555234795779,16.0464513538047,12.7867425159808,1.31940520074686,0.199463657621632,0.852449501065388,38.5978287376017,28.9366464592481,25.5357122088186,0.502497330513487,0.521482918420201,0.434377689410233,28.4537766237683,41.6153728665948,29.7474644194431,0,0.425208599930087,0.209658645508376,0.112328631146495,0,0.32145117339416,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,3.52342313622563,1.14681968437569,0,6.72610275577843,0,8.06510057466716,5.10913991573914,9.04646595597841,0.167186495390678,2.28145586643513,3.78758244587787,0,0.111410456885174,10.6058126690941,4.43067789167242,5.68688113906533,0,0.260118695119756,0,0.276350017785848,0,2.52087157375503,0.802622484269139,1.04535523804977,0,6.51474839123266,4.12352934579156,6.32549230048757,0.318565414324097,0,0,0,0.383959833463255,0,0,0,7.05623601286563,4.01160293675261,3.91025890483557,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,0.196468613246569,0.364295288292542,0.370784442784429,3.24547393654683,2.26368658489047,1.59549552622638,0.476981248610684,0.571994910780128,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0.805658634218294,0,0,0,0,0,0,0,0,0,0,9.22462922052443,15.511210565933,0,0,0.12663051166458,18.140057771411,1.43418310374407,0.709336764396714,0.560677600142307,0,0.74000264525148,0,0.67355336034844,0,0,0,0,0.624320153660641,0,0.448346041655403,0.117434498643765,0,0.140450806702248,0,0,0,0,0,2.73048408581408,0,0,0,0,0,0,0.150238058906597,0.794025282120147,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0.773043412653187,1.63647672354501,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0.925884451585296,0,0,0,0,0,7.21832238805369,5.55582615091933,3.42457474022277,0,0,0,12.4022260523796,1.78357394746474,0,0.503946384596579,0.141775097242386,2.50763863567975,1.16253575405585,0,0,0,5.39053100406007,13.5472756211944,2.90357596880674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,2.17048642156577,0,0.325736184293735,0,0,0.602878754119172,0,1.49959486773086,1.2162378064119,0,4.21667878966063,0,0,0,0,0,0.179060963239896,0,6.30498432646167,4.09692392233083,3.46526197955321,0,0,0,0,0,4.49404214368309,5.9832291840805,4.97298616123243,0.12269149171914,0,0,0,0,0,0.585707074963566,0,0,0,0,0.184369168541703,0,0,0,2.27444828735176,2.15714200818617,2.66818894508611,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0.519254429183621,0.348631135379878,0,0.200506470303285,0,0,0.182091168006717,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0.275673144969061,0.107420244868274,0.145016693914229,0.0852266274161009,0,0.495854746082934,0.192190067365106,0.510450849978337,0,1.39453664789186,4.09256050879832,6.970372701606,7.70083950440222,4.25844824253617,4.34966496037536,2.7798632865588,2.57624796135584,0,0.632758849437452,0.571890581771475,0,0,0.636406495851874,3.13979456079692,0,0,0,3.43710218674637,0,0.842516912477962,0,4.87426979262569,3.16950440270266,0.409499734223957,0,1.13008116620243,1.10273068709225,5.30751180192976,3.06915619677634,0,0,0.202910376962704,0,0.563391205064483,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,0,0.188287601553558,0.43050537267123,0,0,0.459446800413919,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0.929015875628594,0.28853842595289,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,6.46371628809375,0,0,1.78178808499583,0,0,0,0.445234820091624,0,0,0.398495976502139,1.10513566212459,0,0,17.6011271809329,0,0,0,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0.91153644677601,0.23056390438806,0,0,1.27600463892768,0.183195186803725,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,125.724958560584,49.7962673954407,48.7650504190477,0,0,0,0.182454789215666,0.19566461893209,0,0,0,0,0.568679216656392,0.450970258243478,0,0,0,0,0,0,0,0,1.17590876897253,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0.288950589901519,0.600420288709789,0.136905378891993,0,0,13.407255068245,0,0.229160424011684,0,0,0,0.223171457441873,0.0671834724867263,1.08089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| ||
|short_description=p4@TNFAIP3 | |short_description=p4@TNFAIP3 | ||
}} | }} |
Latest revision as of 03:20, 25 September 2015
Short description: | p4@TNFAIP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TNFAIP3_5end |
Coexpression cluster: | C817_cord_CD14_mycosis_xeroderma_migratory_B_hairy |
Association with transcript: | -167bp_to_ENST00000535332, ENST00000535574, ENST00000539356_5end |
EntrezGene: | TNFAIP3 |
HGNC: | 11896 |
UniProt: | F5H7A9F5GYN2F5H1G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.95e-24 | 108 |
immune system | 7.83e-23 | 93 |
hematopoietic system | 2.90e-21 | 98 |
blood island | 2.90e-21 | 98 |
bone marrow | 6.29e-17 | 76 |
lateral plate mesoderm | 6.38e-16 | 203 |
bone element | 7.62e-15 | 82 |
skeletal element | 1.57e-12 | 90 |
connective tissue | 2.87e-11 | 371 |
skeletal system | 3.32e-10 | 100 |
musculoskeletal system | 6.34e-10 | 167 |
mesoderm | 7.52e-09 | 315 |
mesoderm-derived structure | 7.52e-09 | 315 |
presumptive mesoderm | 7.52e-09 | 315 |
systemic artery | 1.75e-08 | 33 |
systemic arterial system | 1.75e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.43e-09 | 14 |