FFCP PHASE1:Hg19::chr6:138866863..138866887,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57224 | |EntrezGene=57224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21021 | |HGNC=21021 | ||
|TSSclassifier=strong | |||
|UniProt=E9PAK2 | |UniProt=E9PAK2 | ||
|association_with_transcript=-15bp_to_ENST00000342260_5end | |association_with_transcript=-15bp_to_ENST00000342260_5end | ||
|cluster_id=chr6:138866863..138866887,- | |||
|coexpression_cluster_id=C4565 | |||
|description=CAGE_peak_2_at_NHSL1_5end | |description=CAGE_peak_2_at_NHSL1_5end | ||
|id=chr6:138866863..138866887,- | |id=chr6:138866863..138866887,- | ||
|ontology_enrichment_celltype=CL:0000222!6.19e-29!119;CL:0000115!7.71e-19!35;CL:0000055!1.05e-18!180;CL:0002139!1.01e-17!24;CL:0002078!1.55e-16!44;CL:0000213!3.96e-16!57;CL:0000215!3.96e-16!57;CL:0000183!1.27e-15!59;CL:0000187!2.27e-15!54;CL:0000680!8.48e-15!57;CL:0000056!8.48e-15!57;CL:0000355!8.48e-15!57;CL:0000220!2.13e-14!246;CL:0002321!7.15e-14!248;CL:0000393!1.65e-13!60;CL:0000211!1.65e-13!60;CL:0000071!2.43e-13!18;CL:0002546!2.43e-13!18;CL:0000192!3.31e-11!42;CL:0000514!3.31e-11!42;CL:0000359!4.80e-09!32;CL:0000057!1.61e-08!75;CL:0002494!4.34e-08!16;CL:1000413!2.75e-07!9 | |ontology_enrichment_celltype=CL:0000222!6.19e-29!119;CL:0000115!7.71e-19!35;CL:0000055!1.05e-18!180;CL:0002139!1.01e-17!24;CL:0002078!1.55e-16!44;CL:0000213!3.96e-16!57;CL:0000215!3.96e-16!57;CL:0000183!1.27e-15!59;CL:0000187!2.27e-15!54;CL:0000680!8.48e-15!57;CL:0000056!8.48e-15!57;CL:0000355!8.48e-15!57;CL:0000220!2.13e-14!246;CL:0002321!7.15e-14!248;CL:0000393!1.65e-13!60;CL:0000211!1.65e-13!60;CL:0000071!2.43e-13!18;CL:0002546!2.43e-13!18;CL:0000192!3.31e-11!42;CL:0000514!3.31e-11!42;CL:0000359!4.80e-09!32;CL:0000057!1.61e-08!75;CL:0002494!4.34e-08!16;CL:1000413!2.75e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.47e-20;24!CL:0000115;1.78e-19;36!CL:0000071;2.13e-15;18!CL:0002078;2.07e-14;45!CL:0000213;7.25e-12;58!CL:0000215;7.25e-12;58!CL:0000187;2.00e-09;55!CL:0000359;3.20e-09;32!CL:0002494;4.15e-09;16!CL:0000192;2.06e-08;43!CL:1000413;2.79e-08;9!CL:0000393;3.38e-07;61!CL:0000211;3.38e-07;61!CL:0002138;9.98e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.06e-33,121;CL:0000115,2.60e-23,36;CL:0002078,2.47e-21,45;CL:0002139,1.62e-20,24;CL:0000213,5.11e-19,58;CL:0000215,5.11e-19,58;CL:0000187,2.58e-16,55;CL:0002321,6.39e-16,250;CL:0000680,7.42e-16,58;CL:0000056,7.42e-16,58;CL:0000355,7.42e-16,58;CL:0000071,2.26e-15,18;CL:0002546,2.26e-15,18;CL:0000393,4.83e-13,61;CL:0000211,4.83e-13,61;CL:0000192,1.55e-11,43;CL:0000514,1.55e-11,43;CL:0002494,3.23e-09,16;CL:0000359,3.25e-09,32;CL:1000413,2.80e-08,9;CL:0000057,5.25e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002546;2.13e-15;18!CL:0000222;4.93e-10;121!CL:0000355;2.82e-09;58!CL:0000514;2.06e-08;43!CL:0005022;9.98e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.90e-33!79;UBERON:0007798!1.90e-33!79;UBERON:0001009!1.04e-31!113;UBERON:0004535!1.09e-29!110;UBERON:0004872!5.26e-29!84;UBERON:0000119!9.98e-29!312;UBERON:0000055!2.14e-27!69;UBERON:0003914!2.15e-27!118;UBERON:0000483!4.90e-27!309;UBERON:0001981!5.16e-24!60;UBERON:0007500!5.16e-24!60;UBERON:0004537!5.16e-24!60;UBERON:0006965!5.16e-24!60;UBERON:0000490!1.23e-22!138;UBERON:0000025!8.18e-22!194;UBERON:0004111!7.51e-19!241;UBERON:0000477!1.00e-18!286;UBERON:0004290!3.16e-17!70;UBERON:0002385!1.50e-16!63;UBERON:0001015!1.50e-16!63;UBERON:0000383!1.50e-16!63;UBERON:0001134!3.44e-16!61;UBERON:0002036!3.44e-16!61;UBERON:0003082!3.44e-16!61;UBERON:0007100!1.05e-14!27;UBERON:0001637!1.77e-14!42;UBERON:0003509!1.77e-14!42;UBERON:0004572!1.77e-14!42;UBERON:0000914!3.99e-14!83;UBERON:0002329!3.99e-14!83;UBERON:0003077!3.99e-14!83;UBERON:0003059!3.99e-14!83;UBERON:0007282!3.99e-14!83;UBERON:0009618!3.99e-14!83;UBERON:0007285!3.99e-14!83;UBERON:0000475!5.28e-14!365;UBERON:0001986!2.43e-13!18;UBERON:0004638!2.43e-13!18;UBERON:0004852!2.43e-13!18;UBERON:0000481!4.78e-13!347;UBERON:0005256!5.27e-13!143;UBERON:0000486!8.53e-13!82;UBERON:0000948!1.27e-12!24;UBERON:0005498!1.27e-12!24;UBERON:0004140!1.27e-12!24;UBERON:0009881!1.27e-12!24;UBERON:0004141!1.27e-12!24;UBERON:0003084!1.27e-12!24;UBERON:0007005!1.27e-12!24;UBERON:0004139!1.27e-12!24;UBERON:0004291!1.27e-12!24;UBERON:0006914!2.64e-12!25;UBERON:0000487!3.66e-12!22;UBERON:0004573!9.88e-12!33;UBERON:0004571!9.88e-12!33;UBERON:0000468!4.03e-11!659;UBERON:0000947!7.58e-11!21;UBERON:0010191!7.58e-11!21;UBERON:0002100!1.53e-10!216;UBERON:0000467!1.27e-09!625;UBERON:0000480!1.87e-09!626;UBERON:0003915!2.75e-07!9;UBERON:0004700!2.75e-07!9;UBERON:0001917!2.75e-07!9;UBERON:0001048!4.41e-07!168;UBERON:0001135!7.43e-07!15;UBERON:0003103!7.66e-07!69 | |ontology_enrichment_uberon=UBERON:0002049!1.90e-33!79;UBERON:0007798!1.90e-33!79;UBERON:0001009!1.04e-31!113;UBERON:0004535!1.09e-29!110;UBERON:0004872!5.26e-29!84;UBERON:0000119!9.98e-29!312;UBERON:0000055!2.14e-27!69;UBERON:0003914!2.15e-27!118;UBERON:0000483!4.90e-27!309;UBERON:0001981!5.16e-24!60;UBERON:0007500!5.16e-24!60;UBERON:0004537!5.16e-24!60;UBERON:0006965!5.16e-24!60;UBERON:0000490!1.23e-22!138;UBERON:0000025!8.18e-22!194;UBERON:0004111!7.51e-19!241;UBERON:0000477!1.00e-18!286;UBERON:0004290!3.16e-17!70;UBERON:0002385!1.50e-16!63;UBERON:0001015!1.50e-16!63;UBERON:0000383!1.50e-16!63;UBERON:0001134!3.44e-16!61;UBERON:0002036!3.44e-16!61;UBERON:0003082!3.44e-16!61;UBERON:0007100!1.05e-14!27;UBERON:0001637!1.77e-14!42;UBERON:0003509!1.77e-14!42;UBERON:0004572!1.77e-14!42;UBERON:0000914!3.99e-14!83;UBERON:0002329!3.99e-14!83;UBERON:0003077!3.99e-14!83;UBERON:0003059!3.99e-14!83;UBERON:0007282!3.99e-14!83;UBERON:0009618!3.99e-14!83;UBERON:0007285!3.99e-14!83;UBERON:0000475!5.28e-14!365;UBERON:0001986!2.43e-13!18;UBERON:0004638!2.43e-13!18;UBERON:0004852!2.43e-13!18;UBERON:0000481!4.78e-13!347;UBERON:0005256!5.27e-13!143;UBERON:0000486!8.53e-13!82;UBERON:0000948!1.27e-12!24;UBERON:0005498!1.27e-12!24;UBERON:0004140!1.27e-12!24;UBERON:0009881!1.27e-12!24;UBERON:0004141!1.27e-12!24;UBERON:0003084!1.27e-12!24;UBERON:0007005!1.27e-12!24;UBERON:0004139!1.27e-12!24;UBERON:0004291!1.27e-12!24;UBERON:0006914!2.64e-12!25;UBERON:0000487!3.66e-12!22;UBERON:0004573!9.88e-12!33;UBERON:0004571!9.88e-12!33;UBERON:0000468!4.03e-11!659;UBERON:0000947!7.58e-11!21;UBERON:0010191!7.58e-11!21;UBERON:0002100!1.53e-10!216;UBERON:0000467!1.27e-09!625;UBERON:0000480!1.87e-09!626;UBERON:0003915!2.75e-07!9;UBERON:0004700!2.75e-07!9;UBERON:0001917!2.75e-07!9;UBERON:0001048!4.41e-07!168;UBERON:0001135!7.43e-07!15;UBERON:0003103!7.66e-07!69 | ||
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| ||
|short_description=p2@NHSL1 | |short_description=p2@NHSL1 | ||
}} | }} |
Latest revision as of 05:06, 25 September 2015
Short description: | p2@NHSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NHSL1_5end |
Coexpression cluster: | C4565_heart_Meningeal_Endothelial_mesothelioma_Lymphatic_Renal_skeletal |
Association with transcript: | -15bp_to_ENST00000342260_5end |
EntrezGene: | NHSL1 |
HGNC: | 21021 |
UniProt: | E9PAK2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.06e-33 | 121 |
endothelial cell | 2.60e-23 | 36 |
meso-epithelial cell | 2.47e-21 | 45 |
endothelial cell of vascular tree | 1.62e-20 | 24 |
lining cell | 5.11e-19 | 58 |
barrier cell | 5.11e-19 | 58 |
muscle cell | 2.58e-16 | 55 |
embryonic cell | 6.39e-16 | 250 |
muscle precursor cell | 7.42e-16 | 58 |
myoblast | 7.42e-16 | 58 |
multi-potent skeletal muscle stem cell | 7.42e-16 | 58 |
blood vessel endothelial cell | 2.26e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.26e-15 | 18 |
electrically responsive cell | 4.83e-13 | 61 |
electrically active cell | 4.83e-13 | 61 |
smooth muscle cell | 1.55e-11 | 43 |
smooth muscle myoblast | 1.55e-11 | 43 |
cardiocyte | 3.23e-09 | 16 |
vascular associated smooth muscle cell | 3.25e-09 | 32 |
endothelial cell of artery | 2.80e-08 | 9 |
fibroblast | 5.25e-07 | 76 |