FFCP PHASE1:Hg19::chr1:221052994..221053008,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:221052994..221053008,+ to FFCP PHASE1:Hg19::chr1:221052994..221053008,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3142 | |EntrezGene=3142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4978 | |HGNC=4978 | ||
|TSSclassifier=strong | |||
|UniProt=Q14774 | |UniProt=Q14774 | ||
|association_with_transcript=251bp_to_NM_021958,uc001hmv.3_5end | |||
|cluster_id=chr1:221052994..221053008,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_6_at_HLX_5end | |||
|id=chr1:221052994..221053008,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.86e-19!76;CL:0000557!4.99e-19!71;CL:0002009!1.17e-18!65;CL:0002194!6.58e-18!63;CL:0000576!6.58e-18!63;CL:0000040!6.58e-18!63;CL:0000559!6.58e-18!63;CL:0000763!2.89e-17!112;CL:0000049!2.89e-17!112;CL:0000839!2.35e-16!70;CL:0002057!1.28e-13!42;CL:0000860!1.73e-13!45;CL:0000048!1.41e-09!430;CL:0000115!1.43e-08!35;CL:0000723!1.56e-08!436;CL:0002320!4.52e-08!365;CL:0000071!6.80e-08!18;CL:0002546!6.80e-08!18;CL:0000134!8.85e-08!358;CL:0000034!1.10e-07!444;CL:0002139!1.19e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.30e-24;33!CL:0002057;2.30e-24;33!CL:0000473;3.13e-21;39!CL:0000234;3.13e-21;39!CL:0000576;1.51e-17;48!CL:0000766;1.15e-12;69!CL:0000763;5.98e-08;100!CL:0000115;9.50e-08;36!CL:0000071;1.15e-07;18!CL:0000990;2.39e-07;8!CL:0002139;7.89e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,3.31e-30,61;CL:0000766,2.23e-29,72;CL:0002194,6.71e-29,59;CL:0000576,6.71e-29,59;CL:0000040,6.71e-29,59;CL:0000559,6.71e-29,59;CL:0000557,6.93e-29,67;CL:0000763,1.15e-27,108;CL:0000049,1.15e-27,108;CL:0000839,2.80e-25,66;CL:0000473,3.59e-23,48;CL:0000234,3.59e-23,48;CL:0000860,8.90e-22,42;CL:0002057,8.90e-22,42;CL:0002032,2.87e-13,161;CL:0000837,2.87e-13,161;CL:0000738,4.60e-13,136;CL:0000037,1.95e-12,168;CL:0000988,7.14e-11,177;CL:0002031,6.53e-10,120;CL:0000134,7.19e-10,354;CL:0002087,9.64e-10,115;CL:0002320,1.43e-09,361;CL:0000115,8.69e-09,36;CL:0000048,1.18e-08,427;CL:0000723,3.90e-08,433;CL:0000071,1.03e-07,18;CL:0002546,1.03e-07,18;CL:0000990,1.44e-07,8;CL:0000219,1.73e-07,386;CL:0000034,1.78e-07,441;CL:0002139,6.96e-07,24;CL:0002078,8.05e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002057;4.17e-16;42!CL:0000049;6.91e-08;108!CL:0002546;1.15e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!6.94e-22!216;UBERON:0002193!1.78e-19!112;UBERON:0002390!5.79e-18!102;UBERON:0003061!5.79e-18!102;UBERON:0002371!2.02e-16!80;UBERON:0002204!2.42e-16!167;UBERON:0001474!4.57e-16!86;UBERON:0004765!2.15e-14!101;UBERON:0001434!2.15e-14!101;UBERON:0002405!2.79e-14!115;UBERON:0000926!3.10e-12!448;UBERON:0004120!3.10e-12!448;UBERON:0006603!3.10e-12!448;UBERON:0001009!7.78e-12!113;UBERON:0004535!1.15e-11!110;UBERON:0004872!2.01e-10!84;UBERON:0000055!2.14e-09!69;UBERON:0001981!1.00e-08!60;UBERON:0007500!1.00e-08!60;UBERON:0004537!1.00e-08!60;UBERON:0006965!1.00e-08!60;UBERON:0002384!3.88e-08!375;UBERON:0001986!6.80e-08!18;UBERON:0004638!6.80e-08!18;UBERON:0004852!6.80e-08!18;UBERON:0002049!1.39e-07!79;UBERON:0007798!1.39e-07!79;UBERON:0000479!3.55e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.15e-07;18!UBERON:0001986;1.15e-07;18!UBERON:0004852;1.15e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.08e-28,203;UBERON:0002193,1.19e-23,108;UBERON:0002371,1.68e-23,76;UBERON:0002390,2.09e-23,98;UBERON:0003061,2.09e-23,98;UBERON:0001474,6.26e-23,82;UBERON:0002405,3.35e-22,93;UBERON:0004765,1.99e-20,90;UBERON:0001434,1.11e-18,100;UBERON:0000926,2.92e-17,315;UBERON:0004120,2.92e-17,315;UBERON:0006603,2.92e-17,315;UBERON:0002204,6.61e-13,167;UBERON:0002384,2.13e-09,371;UBERON:0004535,4.94e-08,109;UBERON:0001009,5.18e-08,112;UBERON:0004638,1.03e-07,18;UBERON:0001986,1.03e-07,18;UBERON:0004852,1.03e-07,18;UBERON:0004872,2.70e-07,83;UBERON:0000055,6.88e-07,68 | |||
|phase1_expression=0.54503513781167,0,1.55049844505568,0,0.893922188854576,1.74467704820074,0,1.26343974685366,0,0,0,0,0,0.618831764800233,1.65698687863958,2.6893005858071,1.80808358407193,1.46062018077475,4.39139518911456,0.123121058076788,0,0.313454721478088,0,0,0,0,0.0821005894499457,0.0787107813136792,7.08055698328027,0,0.309632246632152,0,0,0,0,0,0.293600439334847,1.10799081706375,0.401088894940283,1.08505435357926,1.34349284543955,1.6194683300949,2.31818010870768,0.726991193897824,0.377875943688809,0,3.48643555358527,2.87817521615278,4.64559556342655,17.8369283239733,15.6258030982751,7.80391358632331,10.3423704220986,6.45484683583826,2.70852973188684,1.50593871634084,1.63743690034707,1.57306439111559,11.0190201253525,7.06043859567406,5.75403413219137,6.59702600373432,14.1619196911359,8.95071976118658,3.77272010217159,6.80862269629368,6.85104473895132,16.5824119069451,14.6015217157656,7.8187984093842,5.44859552370032,6.2607198117886,4.1140110367315,0.211255286311942,0,0,1.23561494261145,1.80212271409808,0.64290234678832,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0.670700859703636,0.767175371061182,0.361439152384566,0.50133791063589,0.724232594804119,0,0.486634870302636,0,0,0,0.72038491523742,0,0,3.57002133020152,3.13433527138681,3.98873881556595,0,0,0,0.993812036833525,2.58070378531837,1.04142150482278,0.56530794192401,2.51699661725944,1.10047216776027,2.71693456497854,0.775250277507987,0,1.33888245105868,1.20848795132744,5.32190474002959,1.70843440283719,2.57364156242108,1.62028389576352,0.892997282840798,0.22452937262617,3.71617885594963,4.5994991239765,2.84779697870439,0.916008719652036,0,3.87780264148325,0,0.993943903390637,0.25326102332916,1.58891016975863,0.286836620748814,0.709336764396714,0,1.06748995729705,0.24666754841716,0.311211035399766,0.404132016209064,0.490385709340376,0,0,0.937285727335186,0.624320153660641,0,1.19558944441441,0.469737994575059,0.161872944368132,0,0.408308342509787,0.122834317311768,1.54988671763648,0,0.494533858557114,1.82032272387605,5.03032699271367,0.168336113954066,0.125118519871964,1.10825646193673,0,0.612975591598039,0.45071417671979,0.340296549480063,0.358779271377724,0.640672166455702,0.211931901159562,1.50045548042201,1.44273540933814,0.515281080091258,0.18611685633159,1.0126579934476,0.389748020644795,0.504867548488229,0.0920498986422993,0,0,0.10075209822764,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,1.39310378409594,0,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0.71181185733329,0.134831308160164,0,0,0,0,2.8810180793198,1.47008711385542,1.26755034821831,0,0,0,0,0.171567810298526,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0.288732895522148,2.77791307545966,0.190254152234598,0,0,0.738651018262192,1.63802985597466,1.33768046059855,0,0,0,0,0,0,0.492663237895943,0.088048434013226,1.03664057770386,0.144119953416961,0.37872730027914,0.444485260045183,0.763976851116555,0,0,0,0,0,0,0,0,2.45616259939778,0,0.845302752556,0.26593811658487,1.04007436911366,0.257207374262142,0,0.266422179016099,1.14382394926518,1.08524321078289,0,0.325736184293735,0.355391948742546,0,1.20575750823834,0,0.799783929456456,0,2.51128545716063,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,5.24304916763028,2.99161459204025,4.14415513436035,0.613457458595699,0,0.813795071099207,0.415941723061614,0.535286966391485,0.315404830067869,0.117141414992713,0,2.27407504055985,3.10419213877515,0,0.368738337083406,0.173767228936166,0,0.343143423810856,1.03384013061444,0.862856803274467,0.533637789017222,0,0,0.30239029332968,0.744323423456331,0.460385919864187,0,0.384417447767103,0,2.2519548960105,2.96836132889982,0.616838775210622,0.710246901252508,0.657017248110473,0.519254429183621,0.581051892299796,0,0,0,0.34444334449382,0,0.524497659837696,0,0,0,0,0,3.4120015221269,0,1.0795795805107,4.62681758070868,0,0,0,0,0,0,0,0,0,0,2.06082023295445,0.27470839445503,0.330037999682352,0,0,0,0.580024309752732,0.154048617114644,0.614014698904518,0.275673144969061,0.322260734604821,0.580066775656914,0.767039646744908,0.178064071293475,0,0,0,0,0,0.62962469366128,2.0911118104818,0.924100740528266,1.06461206063404,0,0.74129687641568,0.715624433709956,0,0,0.762520775695299,0.511795582622668,1.71175595213568,0.318203247925937,0,0.899362287916574,1.64722217841633,1.41374882814824,0.606547444719948,3.17020642346017,0.421258456238981,0.48763373908959,1.46228093778771,0,0.682499557039929,0.282810863907425,3.39024349860728,0,0,0.876901770507525,0,0.655894752046633,0,0,0.281695602532241,0.286822704408103,0.491245205065606,0.35667105148125,0,0.422215270595328,0,0.75894634753143,1.04980416073495,0,0,0,2.54188262097304,0,0,0,0,2.02979043692868,0,2.27858874869665,0.714695326373367,0,3.24236655596359,2.70015718619057,3.96562588147135,0,0.962479855263359,0,0.371606350251437,0,0,0,1.5966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| ||
|short_description=p6@HLX | |||
}} | }} |
Latest revision as of 07:01, 25 September 2015
Short description: | p6@HLX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_HLX_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 251bp_to_NM_021958, uc001hmv.3_5end |
EntrezGene: | HLX |
HGNC: | 4978 |
UniProt: | Q14774 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 6.08e-28 | 203 |
hemolymphoid system | 1.19e-23 | 108 |
bone marrow | 1.68e-23 | 76 |
hematopoietic system | 2.09e-23 | 98 |
blood island | 2.09e-23 | 98 |
bone element | 6.26e-23 | 82 |
immune system | 3.35e-22 | 93 |
skeletal element | 1.99e-20 | 90 |
skeletal system | 1.11e-18 | 100 |
mesoderm | 2.92e-17 | 315 |
mesoderm-derived structure | 2.92e-17 | 315 |
presumptive mesoderm | 2.92e-17 | 315 |
musculoskeletal system | 6.61e-13 | 167 |
connective tissue | 2.13e-09 | 371 |
cardiovascular system | 4.94e-08 | 109 |
circulatory system | 5.18e-08 | 112 |
blood vessel endothelium | 1.03e-07 | 18 |
endothelium | 1.03e-07 | 18 |
cardiovascular system endothelium | 1.03e-07 | 18 |
splanchnic layer of lateral plate mesoderm | 2.70e-07 | 83 |
vessel | 6.88e-07 | 68 |