FFCP PHASE1:Hg19::chr8:11706585..11706619,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:11706585..11706619,-
|short_description=p2@CTSB
|description=CAGE_peak_2_at_CTSB_5end
|association_with_transcript=-373bp_to_ENST00000420692,ENST0000054057...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1508 | |EntrezGene=1508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2527 | |HGNC=2527 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2P9 | |UniProt=F5H2P9 | ||
|association_with_transcript=-373bp_to_ENST00000420692,ENST00000540571,uc003wul.2_5end | |||
|cluster_id=chr8:11706585..11706619,- | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_2_at_CTSB_5end | |||
|id=chr8:11706585..11706619,- | |||
|ontology_enrichment_celltype=CL:0002194!6.18e-12!63;CL:0000576!6.18e-12!63;CL:0000040!6.18e-12!63;CL:0000559!6.18e-12!63;CL:0002009!9.96e-12!65;CL:0002057!1.02e-10!42;CL:0000839!7.14e-09!70;CL:0000860!1.06e-08!45;CL:0000557!1.19e-08!71;CL:0002371!3.23e-08!591;CL:0000057!1.43e-07!75;CL:0000055!2.92e-07!180;CL:0000222!4.59e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.38e-16;39!CL:0000234;4.38e-16;39!CL:0000860;1.87e-14;33!CL:0002057;1.87e-14;33!CL:0000576;3.46e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.53e-16,59;CL:0000576,3.53e-16,59;CL:0000040,3.53e-16,59;CL:0000559,3.53e-16,59;CL:0000473,1.28e-15,48;CL:0000234,1.28e-15,48;CL:0002009,5.36e-15,61;CL:0000839,2.04e-12,66;CL:0000557,5.87e-12,67;CL:0000860,1.62e-11,42;CL:0002057,1.62e-11,42;CL:0000766,6.70e-10,72;CL:0000048,4.54e-09,427;CL:0000723,1.17e-08,433;CL:0000057,9.22e-08,76;CL:0000034,1.38e-07,441;CL:0000222,2.02e-07,121;CL:0002320,4.41e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;8.01e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!8.51e-15!659;UBERON:0000467!7.32e-14!625;UBERON:0000480!1.02e-13!626;UBERON:0003081!1.15e-11!216;UBERON:0000926!3.19e-10!448;UBERON:0004120!3.19e-10!448;UBERON:0006603!3.19e-10!448;UBERON:0002204!3.99e-10!167;UBERON:0000922!2.58e-08!612;UBERON:0002050!2.60e-08!605;UBERON:0005423!2.60e-08!605;UBERON:0000923!3.45e-08!604;UBERON:0005291!3.45e-08!604;UBERON:0006598!3.45e-08!604;UBERON:0002532!3.45e-08!604;UBERON:0002405!3.53e-08!115;UBERON:0002371!5.89e-08!80;UBERON:0000062!1.33e-07!511;UBERON:0004765!2.78e-07!101;UBERON:0001434!2.78e-07!101;UBERON:0003102!8.98e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.81e-17,315;UBERON:0004120,2.81e-17,315;UBERON:0006603,2.81e-17,315;UBERON:0002204,1.36e-13,167;UBERON:0003081,1.55e-12,203;UBERON:0002371,2.11e-11,76;UBERON:0001434,2.47e-11,100;UBERON:0004765,7.13e-11,90;UBERON:0001474,8.42e-10,82;UBERON:0002405,1.10e-09,93;UBERON:0003102,1.63e-08,99;UBERON:0002193,1.30e-07,108;UBERON:0002199,2.38e-07,46;UBERON:0002416,2.38e-07,46;UBERON:0002390,7.77e-07,98;UBERON:0003061,7.77e-07,98;UBERON:0002384,8.47e-07,371 | |||
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| ||
|short_description=p2@CTSB | |||
}} | }} |
Latest revision as of 07:16, 25 September 2015
Short description: | p2@CTSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CTSB_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | -373bp_to_ENST00000420692, ENST00000540571, uc003wul.2_5end |
EntrezGene: | CTSB |
HGNC: | 2527 |
UniProt: | F5H2P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.53e-16 | 59 |
monocyte | 3.53e-16 | 59 |
monoblast | 3.53e-16 | 59 |
promonocyte | 3.53e-16 | 59 |
defensive cell | 1.28e-15 | 48 |
phagocyte | 1.28e-15 | 48 |
macrophage dendritic cell progenitor | 5.36e-15 | 61 |
myeloid lineage restricted progenitor cell | 2.04e-12 | 66 |
granulocyte monocyte progenitor cell | 5.87e-12 | 67 |
classical monocyte | 1.62e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.62e-11 | 42 |
myeloid leukocyte | 6.70e-10 | 72 |
multi fate stem cell | 4.54e-09 | 427 |
somatic stem cell | 1.17e-08 | 433 |
fibroblast | 9.22e-08 | 76 |
stem cell | 1.38e-07 | 441 |
mesodermal cell | 2.02e-07 | 121 |
connective tissue cell | 4.41e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.81e-17 | 315 |
mesoderm-derived structure | 2.81e-17 | 315 |
presumptive mesoderm | 2.81e-17 | 315 |
musculoskeletal system | 1.36e-13 | 167 |
lateral plate mesoderm | 1.55e-12 | 203 |
bone marrow | 2.11e-11 | 76 |
skeletal system | 2.47e-11 | 100 |
skeletal element | 7.13e-11 | 90 |
bone element | 8.42e-10 | 82 |
immune system | 1.10e-09 | 93 |
surface structure | 1.63e-08 | 99 |
hemolymphoid system | 1.30e-07 | 108 |
integument | 2.38e-07 | 46 |
integumental system | 2.38e-07 | 46 |
hematopoietic system | 7.77e-07 | 98 |
blood island | 7.77e-07 | 98 |
connective tissue | 8.47e-07 | 371 |