FFCP PHASE1:Mm9::chr8:4493496..4493511,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:4493496..4493511,+
|short_description=p3@Lass4
|description=CAGE_peak_3_at_Lass4_5end
|association_with_transcript=91bp_to_ENSMUST00000008350,NM_026058,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67260 | |EntrezGene=67260 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=28 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D6J1 | |UniProt=Q9D6J1 | ||
|association_with_transcript=91bp_to_ENSMUST00000008350,NM_026058,uc009ktx.2_5end | |||
|cluster_id=chr8:4493496..4493511,+ | |||
|description=CAGE_peak_3_at_Lass4_5end | |||
|id=chr8:4493496..4493511,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.51e-09!114;UBERON:0004121!1.87e-09!102;UBERON:0000924!1.87e-09!102;UBERON:0006601!1.87e-09!102;UBERON:0004111!5.02e-09!122;UBERON:0000033!6.25e-09!63;UBERON:0001017!9.89e-09!73;UBERON:0005743!9.89e-09!73;UBERON:0000073!1.54e-08!75;UBERON:0001016!1.54e-08!75;UBERON:0000955!3.82e-08!50;UBERON:0006238!3.82e-08!50;UBERON:0002616!7.24e-08!49;UBERON:0001049!1.11e-07!52;UBERON:0005068!1.11e-07!52;UBERON:0006241!1.11e-07!52;UBERON:0007135!1.11e-07!52;UBERON:0002346!1.64e-07!71;UBERON:0003075!1.64e-07!71;UBERON:0007284!1.64e-07!71;UBERON:0004535!8.95e-07!23;UBERON:0001009!8.95e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.19e-12,92;UBERON:0004121,9.87e-10,95;UBERON:0000924,9.87e-10,95;UBERON:0006601,9.87e-10,95;UBERON:0000025,1.52e-09,114;UBERON:0004111,4.38e-09,122;UBERON:0010371,6.08e-09,73;UBERON:0001017,1.26e-08,73;UBERON:0001016,1.95e-08,75;UBERON:0002346,6.79e-08,64;UBERON:0003075,6.79e-08,64;UBERON:0007284,6.79e-08,64;UBERON:0000955,1.01e-07,47;UBERON:0006238,1.01e-07,47;UBERON:0001049,1.47e-07,52;UBERON:0005068,1.47e-07,52;UBERON:0006241,1.47e-07,52;UBERON:0007135,1.47e-07,52;UBERON:0000073,1.88e-07,54;UBERON:0002616,1.90e-07,46;UBERON:0004535,8.14e-07,23;UBERON:0001009,8.14e-07,23 | |||
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|phase1_expression=3.68342348341026,0.348975407639361,0.909998478779072,0.60492842261366,1.00179145989269,2.18243053485457,2.80335168714631,10.5881125222093,2.81577444303333,3.7450324211519,0.513653904676515,0.478632953972018,5.13602189793617,7.60557501045277,0.999329285446988,0.202475267389826,1.39912375625629,6.46697438984387,5.48457734422955,6.36584477697045,2.38121212422995,0.0992909512008853,0,3.35984087866154,2.52350209173887,1.14846392823004,1.29228598847722,2.58565479223067,0.760093677825496,1.26015064879965,1.10865255327652,0,0.61506478758457,0,3.75507105676657,3.82339684324532,4.49172583777212,0,0,0,0,0,0,8.3091899863881,8.11015449756117,3.67093504323363,3.9119567217402,7.19483016055474,10.1055644057857,10.304784650937,2.93971485413261,5.75010257459886,6.20795642413625,6.5282592781021,3.6970317905671,3.08711323243136,2.0057340795713,4.12537673821954,1.41621522601718,1.05798195854407,1.90149421051854,3.72728985276045,1.77858959222228,0.449949858640699,0,0.7104801149461,3.29560121570245,6.53171119046643,0.725827286159344,1.21505344498522,0.841299845405528,2.28520787523043,2.87129103237098,0.979926393719632,1.24599112323707,0,2.20231761998777,3.19218345212969,5.37622866396852,1.31886287730194,2.10421580285542,2.6045668527838,6.70039197603314,4.50210088025344,5.50073691996516,2.35702868378934,2.56269025438385,2.23679334990361,1.59025005999687,2.79614772395106,4.63783181922684,1.72084775396277,0,0,0,0.448026887097336,5.05599912474307,1.87473354835864,1.55871602761721,1.06001872353102,5.35204995151386,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0,1.02765491747154,7.50919862576798,2.3750742250372,2.4287945747259,0.913396434936424,2.07553947530453,4.82312449768392,4.35078216402108,1.13099932196708,1.73036477414062,3.47038456607788,0,2.10296904931632,1.98757366614354,0.484875253135222,7.45567044872489,4.68449275218475,4.81727425670947,1.27728527604296,1.91704199209472,0.599902730993408,1.14363204365758,8.68785708547972,4.57500602818627,2.63874139437015,6.25767552692195,7.41574826257959,3.53239675751252,4.54275536589721,6.82323737797119,2.61254638281195,7.58168275301024,376.901363892675,1.69156575851515,1.83921683546778,1.0803727788321,1.50704817835715,3.6739709541717,6.02134485338794,4.2165776051878,150.306658399368,1.07783996466421,0.756424320671277,1.58356011747554,1.7535658594206,1.94633074457919,4.52727816478817,2.26360350048738,4.17971960318836,0,0,0.852490498186778,2.89976081549703,5.62862543954631,4.14142741360334,2.84093682702252,3.34499193970586,3.85667782218446,6.51095045301142,2.95100741539581,4.90414437942112,5.10135534731789,7.38753588355929,7.1340552400353,7.16379938384128,5.70830299756732,6.30770168173747,7.57043814830858,5.86556290561921,0.660837565967596,1.32225283331772,3.19932375802851,3.25131340604614,1.67527699718721,1.61346819698674,1.77902435075896,1.14135375667535,2.37264530772256,1.97638745668813,4.02136334080431,3.18330355265841,3.11942539390592,3.59527763461689,4.97117514711797,3.58454291857861,1.51734320762465,2.17072173958485,3.38123207019241,1.22190796707189,1.35766741017338,2.45475369616115,2.78240763346732,2.06654207171443,3.1399745568275,2.34454611451421,0.592905254174298,0.667380422864376,0.786235980452812,0.224862112384854,0,1.4470629585145,0.25462585178142,0.863088412352432,0.486405680325106,1.09824565275233,2.87536413054709,2.97712758134803,1.5601883655728,1.01031551178845,0.358794827043824,1.4473305640901,6.65111484599777,2.08440552947533,2.11854469374634,3.22515662972857,3.98973422090454,2.34508760418542,3.09456733151818,5.65887578787617,6.14777062014145,8.41565820665345,9.08892181347676,10.8149787712387,7.59813920209941,9.40218880779825,0,0,0,0.827810238914197,8.83028244932856,4.57125577709592,2.78689407140348,1.51482556322624,2.52406575533005,1.95219372148319,2.58508077279359,2.62865677747807,4.45597348164788,2.26461224631066,4.85772842009873,3.21481443702443,2.76701444562566,4.81981974632711,2.55492153374884,8.19101776869374,5.37526965866801,3.62934270539578,2.65490276679926,1.45668381692989,2.11626489875326,3.20628635585027,2.95301892880773,2.76691633149535,2.32585463851399,0.727067458955011,1.42598951353889,2.84433082142234,1.05418608574999,2.06271086496374,7.83011093233712,2.52085531643834,3.36332577835162,2.7863814554107,3.54680467284547,5.35106452806212,3.9491764944509,2.13125464380219,1.87737366450968,0.847328283455281,1.32317038832977,8.07942639413252,2.26050197374268,5.12659861889325,13.6084472163576,12.8029901801148,1.1659233465194,7.23158677840988,0.854354403989263,2.06386867963222,2.59272338317596,1.13021074202815,2.1871076435364,1.37266903923914,4.75939603982795,4.89830083132803,4.00779924032829,0.954670618015114,1.73984796469624,3.86306987541013,4.96824567780286,3.55450103224597,4.36725127492355,3.64133735239016,5.37247462214684,1.83229159388821,7.12882353104861,1.24267862617385,0,1.19613236835183,2.64733584731356,3.69457257853691,2.19571699912143,4.56181538825101,4.22486059124714,3.3853140059427,1.15345278868282,1.44950472495604,0.5760600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| ||
|short_description=p3@Lass4 | |||
}} | }} |
Latest revision as of 13:43, 25 September 2015
Short description: | p3@Lass4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lass4_5end |
Coexpression cluster: | MCL_coexpression_mm9:28 |
Association with transcript: | 91bp_to_ENSMUST00000008350, NM_026058, uc009ktx.2_5end |
EntrezGene: | Lass4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.19e-12 | 92 |
ectoderm-derived structure | 9.87e-10 | 95 |
ectoderm | 9.87e-10 | 95 |
presumptive ectoderm | 9.87e-10 | 95 |
tube | 1.52e-09 | 114 |
anatomical conduit | 4.38e-09 | 122 |
ecto-epithelium | 6.08e-09 | 73 |
central nervous system | 1.26e-08 | 73 |
nervous system | 1.95e-08 | 75 |
neurectoderm | 6.79e-08 | 64 |
neural plate | 6.79e-08 | 64 |
presumptive neural plate | 6.79e-08 | 64 |
brain | 1.01e-07 | 47 |
future brain | 1.01e-07 | 47 |
neural tube | 1.47e-07 | 52 |
neural rod | 1.47e-07 | 52 |
future spinal cord | 1.47e-07 | 52 |
neural keel | 1.47e-07 | 52 |
regional part of nervous system | 1.88e-07 | 54 |
regional part of brain | 1.90e-07 | 46 |
cardiovascular system | 8.14e-07 | 23 |
circulatory system | 8.14e-07 | 23 |