FFCP PHASE1:Mm9::chr2:118554314..118554366,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:118554314..118554366,-
|short_description=p2@Plcb2
|description=CAGE_peak_2_at_Plcb2_5end
|association_with_transcript=-140bp_to_ENSMUST00000102524,NM_1775...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18796 | |EntrezGene=18796 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=A3KGF7 | |UniProt=A3KGF7 | ||
|association_with_transcript=-140bp_to_ENSMUST00000102524,NM_177568,uc008lsi.1,uc008lsk.1,uc012cbj.1_5end | |||
|cluster_id=chr2:118554314..118554366,- | |||
|description=CAGE_peak_2_at_Plcb2_5end | |||
|id=chr2:118554314..118554366,- | |||
|ontology_enrichment_celltype=CL:0000988!1.17e-09!32;CL:0002032!1.17e-09!32;CL:0000037!1.17e-09!32;CL:0000566!1.17e-09!32;CL:0000837!1.17e-09!32;CL:0000738!7.46e-07!17;CL:0002087!7.46e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.59e-15,32;CL:0002032,7.59e-15,32;CL:0000037,7.59e-15,32;CL:0000837,7.59e-15,32;CL:0002320,2.90e-10,46;CL:0000134,2.90e-10,46;CL:0002031,3.98e-10,25;CL:0000738,3.99e-09,17;CL:0002087,3.99e-09,17;CL:0000542,3.51e-08,13;CL:0000051,3.51e-08,13;CL:0000049,5.75e-08,19;CL:0000838,1.02e-07,12;CL:0000791,1.33e-07,9;CL:0000789,1.33e-07,9;CL:0002420,1.33e-07,9;CL:0002419,1.33e-07,9;CL:0000790,1.33e-07,9;CL:0000219,2.15e-07,54;CL:0000084,5.73e-07,11;CL:0000827,5.73e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.24e-17!48;UBERON:0002390!5.04e-17!45;UBERON:0003061!5.04e-17!45;UBERON:0002405!1.93e-14!70;UBERON:0004177!5.25e-11!29;UBERON:0000926!2.02e-09!193;UBERON:0004120!2.02e-09!193;UBERON:0006603!2.02e-09!193;UBERON:0003081!7.12e-09!88;UBERON:0002370!1.91e-08!23;UBERON:0000974!1.91e-08!23;UBERON:0004807!1.91e-08!23;UBERON:0005058!1.91e-08!23;UBERON:0003351!1.91e-08!23;UBERON:0009113!1.91e-08!23;UBERON:0003295!1.91e-08!23;UBERON:0009722!1.91e-08!23;UBERON:0005562!1.91e-08!23;UBERON:0007690!1.91e-08!23;UBERON:0005057!2.47e-08!51;UBERON:0000065!4.68e-08!41;UBERON:0006562!1.35e-07!24;UBERON:0003408!1.35e-07!24;UBERON:0001557!1.35e-07!24;UBERON:0001042!1.35e-07!24;UBERON:0008814!1.35e-07!24;UBERON:0009145!1.35e-07!24;UBERON:0001004!1.79e-07!42;UBERON:0001474!2.35e-07!22;UBERON:0004765!2.35e-07!22;UBERON:0001434!2.35e-07!22;UBERON:0002371!6.87e-07!16;UBERON:0001041!9.01e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.13e-27,45;UBERON:0003061,4.13e-27,45;UBERON:0002193,2.41e-26,48;UBERON:0002405,2.41e-26,48;UBERON:0004177,2.06e-17,29;UBERON:0005057,2.06e-17,29;UBERON:0002370,1.62e-13,23;UBERON:0000974,1.62e-13,23;UBERON:0004807,1.62e-13,23;UBERON:0005058,1.62e-13,23;UBERON:0003351,1.62e-13,23;UBERON:0009113,1.62e-13,23;UBERON:0003295,1.62e-13,23;UBERON:0009722,1.62e-13,23;UBERON:0005562,1.62e-13,23;UBERON:0007690,1.62e-13,23;UBERON:0000077,8.51e-13,35;UBERON:0006562,1.20e-12,24;UBERON:0003408,1.20e-12,24;UBERON:0001557,1.20e-12,24;UBERON:0001042,1.20e-12,24;UBERON:0008814,1.20e-12,24;UBERON:0009145,1.20e-12,24;UBERON:0001041,4.45e-12,80;UBERON:0000065,8.78e-12,41;UBERON:0003081,1.49e-11,87;UBERON:0001004,2.84e-11,42;UBERON:0000072,1.89e-10,27;UBERON:0002384,2.90e-10,46;UBERON:0002371,4.12e-10,16;UBERON:0001474,7.00e-10,22;UBERON:0004765,7.00e-10,22;UBERON:0001434,7.00e-10,22;UBERON:0005911,5.79e-09,69;UBERON:0000926,2.23e-08,120;UBERON:0004120,2.23e-08,120;UBERON:0006603,2.23e-08,120;UBERON:0002204,2.67e-08,32;UBERON:0004921,1.22e-07,114;UBERON:0001007,2.89e-07,116;UBERON:0001555,2.89e-07,116;UBERON:0007026,2.89e-07,116;UBERON:0003929,4.87e-07,55;UBERON:0004119,6.59e-07,118;UBERON:0000925,6.59e-07,118;UBERON:0006595,6.59e-07,118 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,12.0084690800666,1.267098499365,1.63845168425395,1.71217968225505,2.47293692885543,14.5520620441525,16.2601948499335,1.66554880907831,1.82227740650843,2.09868563438444,8.83294063003066,10.9691546884591,8.91218268775863,1.10556277196391,0.794327609607082,1.56719873483361,0.319984845586813,0.68822784320151,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,31.3898723052681,14.0640362014284,30.3643771504803,40.58797267414,32.1031377930469,36.4132764773365,0,0,0,0,0,0,0,0,0,7.04686945442493,9.42970784614748,14.1159395639835,0,0,0,0,0,0,0,0,2.6996991518442,1.97773272513395,4.9733608046227,0,1.92109152660777,0,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0.383062014255563,0.307213066512487,0,0,0,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0,0,1.68533304158102,0,0,0,0.14084341977668,0,0,0,0,0,0,1.1418387971906,19.9382170408322,0.593768556259299,0.346970653532272,0.304465478312141,0.461230994512117,0,0.470354828542819,0.125666591329675,0.247194967734374,0.578397427679647,11.4999371753484,0.808834249737046,5.30019644304944,4.363877278217,1.86391761218122,0,0,0.510914110417183,5.15205035375457,2.39961092397363,5.97230067243404,0.149790639404823,0,0.125654352112864,0.521472960576829,0.255715457330331,0,0.162241263067758,0.611036183101898,5.47390670684409,0,0,0,0,0.180062129805349,0.150704817835715,0.204109497453984,0.12811372028485,0,0,0.215567992932842,0.378212160335639,0,0.219195732427575,0.556094498451196,1.74126083261083,0.61734640922383,0.995171334092466,4.91549231119264,11.5806558201622,8.24074148247219,0.414251545071004,0,0,0.946978942340841,0.393528463494808,0,0.465067889500816,0.536546802799238,0.116765342367169,0.16455984991348,0.492502392237286,0.243206428637567,0.438599962275997,0,0.268412837520744,0.420579897128254,0,0.330418782983798,0.264450566663544,1.91959425481711,0.696710015581316,0.38660238396628,1.21010114774006,1.11189021922435,0.380451252225118,0,0.658795818896044,1.25667604400135,0.397912944082302,0.38992817423824,3.59527763461689,0.432276099749388,0.796565093017469,0.569003702859245,0.228497025219458,0,0,0,0.631222379012867,0.822074982615345,0.738050739898011,0.31399745568275,0.246794327843601,0,1.33476084572875,2.16214894624523,2.47348323623339,2.84004169943904,1.68824011826692,1.01850340712568,1.43848068725405,3.56697498905078,1.09824565275233,0,4.46569137202204,0.312037673114561,0.252578877947112,0.179397413521912,0.482443521363367,3.8798169934987,0.37898282354097,1.14075483509418,0.339490171550376,1.17345124144251,0.502518772325447,1.19021820443007,0.585400943573396,2.36452716159286,0.8858587585951,2.07291199254733,3.4411296090305,2.76295970985433,2.89298117163023,3.01582567878545,5.98296252200581,0.983528546038072,0.275936746304732,0,0.586058432961016,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.712262414669021,0.651547837414304,1.81467135269789,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0,0,0,1.42598951353889,0.632073515871632,0,1.03135543248187,0,0,0.388076051348264,0.643011105094777,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0.65954501176592,0.322928853391811,0.361877549568935,0.119372344003136,0.328281799490123,1.1659233465194,0.370850604021019,4.78438466233988,2.06386867963222,4.07427960213366,2.82552685507037,4.64760374251486,3.88922894451088,9.00885678967433,14.8348539463077,9.81219814011409,0,1.10717597753397,0.203319467126849,0.324016022465404,0.418176592028937,1.09181281873089,0.809186078308924,0.991841468704031,0.523511883968059,1.03691978633434,0,0,1.34564891439581,1.82004339502807,0.777804753376191,0.774958940866387,0.337912250981556,0.352071715937262,0.13020438484395,0.314578033277133,0,0,11.3764003426144,3.44632865993279,3.59488350076895,4.28738715826724,5.19177417435696,8.94066096515692,10.3368086587173,9.89519832069667,12.5198397935703,10.592746125045,12.6032731421051,15.8856345605796,14.2393525627688,22.0897345123165,0,0,0,0,0.579568782096571,0.187682475451182,1.46521299413812,0.857473516316263,1.00314420807073,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.486213434136588,0,0.919217542250071,0,1.23621034343337,0,0.758091635291392,0.25347929989024,0.188626341386076,0.561849044819294,0.640251524048693,0.861532034334199,0.476293691283074,0.347652977834566,0.77163688185482,0,0.735994600671987,1.37147700954166,0.70990322463735,1.1921809497366,0.436039249896986,1.12931256498397,0.761531471025089,0.548783918618318,0,0.407412341537585,0.561142271657738,0.711810108745045,0.492522411877817,0.409231043169689,1.08455788830176,1.35034627686799,0.249810577937946,0,1.07435527024149,0.765153328275374,0.441182838239031,1.39120701372253 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| ||
|short_description=p2@Plcb2 | |||
}} | }} |
Latest revision as of 13:52, 25 September 2015
Short description: | p2@Plcb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Plcb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -140bp_to_ENSMUST00000102524, NM_177568, uc008lsi.1, uc008lsk.1, uc012cbj.1_5end |
EntrezGene: | Plcb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.59e-15 | 32 |
hematopoietic oligopotent progenitor cell | 7.59e-15 | 32 |
hematopoietic stem cell | 7.59e-15 | 32 |
hematopoietic multipotent progenitor cell | 7.59e-15 | 32 |
connective tissue cell | 2.90e-10 | 46 |
mesenchymal cell | 2.90e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 3.98e-10 | 25 |
leukocyte | 3.99e-09 | 17 |
nongranular leukocyte | 3.99e-09 | 17 |
lymphocyte | 3.51e-08 | 13 |
common lymphoid progenitor | 3.51e-08 | 13 |
common myeloid progenitor | 5.75e-08 | 19 |
lymphoid lineage restricted progenitor cell | 1.02e-07 | 12 |
mature alpha-beta T cell | 1.33e-07 | 9 |
alpha-beta T cell | 1.33e-07 | 9 |
immature T cell | 1.33e-07 | 9 |
mature T cell | 1.33e-07 | 9 |
immature alpha-beta T cell | 1.33e-07 | 9 |
motile cell | 2.15e-07 | 54 |
T cell | 5.73e-07 | 11 |
pro-T cell | 5.73e-07 | 11 |