FFCP PHASE1:Mm9::chr12:109648783..109648795,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68519 | |EntrezGene=68519 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |MCL_coexpression_id=20 | ||
|TSSclassifier=NA | |||
|UniProt=Q05BC3 | |UniProt=Q05BC3 | ||
|association_with_transcript=31bp_to_ENSMUST00000054955_5end | |association_with_transcript=31bp_to_ENSMUST00000054955_5end | ||
|cluster_id=chr12:109648783..109648795,+ | |||
|description=CAGE_peak_12_at_Eml1_5end | |description=CAGE_peak_12_at_Eml1_5end | ||
|id=chr12:109648783..109648795,+ | |id=chr12:109648783..109648795,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.17e-22,3;CL:0002614,9.09e-11,3;CL:0000117,5.76e-08,23;CL:0000337,5.76e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.25e-19!71;UBERON:0003075!1.25e-19!71;UBERON:0007284!1.25e-19!71;UBERON:0004121!6.04e-19!102;UBERON:0000924!6.04e-19!102;UBERON:0006601!6.04e-19!102;UBERON:0000033!7.01e-18!63;UBERON:0002616!3.30e-15!49;UBERON:0001017!8.92e-15!73;UBERON:0005743!8.92e-15!73;UBERON:0000955!9.57e-15!50;UBERON:0006238!9.57e-15!50;UBERON:0000073!4.01e-14!75;UBERON:0001016!4.01e-14!75;UBERON:0001049!1.62e-13!52;UBERON:0005068!1.62e-13!52;UBERON:0006241!1.62e-13!52;UBERON:0007135!1.62e-13!52;UBERON:0003056!5.11e-11!49;UBERON:0007811!1.45e-10!86;UBERON:0002298!5.16e-10!6;UBERON:0000153!1.13e-09!94;UBERON:0003080!5.17e-09!40;UBERON:0002780!3.52e-08!39;UBERON:0001890!3.52e-08!39;UBERON:0006240!3.52e-08!39;UBERON:0002020!1.57e-07!34;UBERON:0002791!3.81e-07!29;UBERON:0003528!3.81e-07!29;UBERON:0001893!3.81e-07!29;UBERON:0002369!4.02e-07!7;UBERON:0006858!4.02e-07!7;UBERON:0002021!5.05e-07!10;UBERON:0000411!5.05e-07!10;UBERON:0001950!5.05e-07!10;UBERON:0002950!5.63e-07!4;UBERON:0001891!5.63e-07!4;UBERON:0009616!5.63e-07!4 | |ontology_enrichment_uberon=UBERON:0002346!1.25e-19!71;UBERON:0003075!1.25e-19!71;UBERON:0007284!1.25e-19!71;UBERON:0004121!6.04e-19!102;UBERON:0000924!6.04e-19!102;UBERON:0006601!6.04e-19!102;UBERON:0000033!7.01e-18!63;UBERON:0002616!3.30e-15!49;UBERON:0001017!8.92e-15!73;UBERON:0005743!8.92e-15!73;UBERON:0000955!9.57e-15!50;UBERON:0006238!9.57e-15!50;UBERON:0000073!4.01e-14!75;UBERON:0001016!4.01e-14!75;UBERON:0001049!1.62e-13!52;UBERON:0005068!1.62e-13!52;UBERON:0006241!1.62e-13!52;UBERON:0007135!1.62e-13!52;UBERON:0003056!5.11e-11!49;UBERON:0007811!1.45e-10!86;UBERON:0002298!5.16e-10!6;UBERON:0000153!1.13e-09!94;UBERON:0003080!5.17e-09!40;UBERON:0002780!3.52e-08!39;UBERON:0001890!3.52e-08!39;UBERON:0006240!3.52e-08!39;UBERON:0002020!1.57e-07!34;UBERON:0002791!3.81e-07!29;UBERON:0003528!3.81e-07!29;UBERON:0001893!3.81e-07!29;UBERON:0002369!4.02e-07!7;UBERON:0006858!4.02e-07!7;UBERON:0002021!5.05e-07!10;UBERON:0000411!5.05e-07!10;UBERON:0001950!5.05e-07!10;UBERON:0002950!5.63e-07!4;UBERON:0001891!5.63e-07!4;UBERON:0009616!5.63e-07!4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.17e-22,3;UBERON:0002275,2.17e-22,3;UBERON:0001896,5.77e-16,2;UBERON:0002298,5.77e-16,2;UBERON:0005290,5.77e-16,2;UBERON:0010096,5.77e-16,2;UBERON:0000073,1.65e-15,54;UBERON:0001017,1.35e-13,73;UBERON:0001016,3.30e-13,75;UBERON:0001049,9.03e-11,52;UBERON:0005068,9.03e-11,52;UBERON:0006241,9.03e-11,52;UBERON:0007135,9.03e-11,52;UBERON:0002038,9.09e-11,3;UBERON:0009663,9.09e-11,3;UBERON:0009661,9.09e-11,3;UBERON:0000125,9.09e-11,3;UBERON:0002308,9.09e-11,3;UBERON:0004121,3.22e-10,95;UBERON:0000924,3.22e-10,95;UBERON:0006601,3.22e-10,95;UBERON:0002616,1.29e-09,46;UBERON:0000955,2.14e-09,47;UBERON:0006238,2.14e-09,47;UBERON:0002346,1.34e-08,64;UBERON:0003075,1.34e-08,64;UBERON:0007284,1.34e-08,64;UBERON:0002950,2.67e-08,4;UBERON:0001891,2.67e-08,4;UBERON:0009616,2.67e-08,4;UBERON:0010286,2.67e-08,4;UBERON:0010371,1.97e-07,73;UBERON:0002021,5.44e-07,10;UBERON:0000411,5.44e-07,10;UBERON:0001950,5.44e-07,10 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0.244981598429908,0.0958454710182364,0,1.10115880999389,2.68143409978894,1.38245879930619,0,0,0,1.3959149950069,1.68828783009504,0.45839474333043,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0.461230994512117,0.753613202763113,0.587943535678524,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0.748953197024114,0.915001205637253,0,0.347648640384553,0.255715457330331,2.70124457927428,0.811206315338788,0,0.124406970610093,0,0,0.260240885925407,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,2.57865710502847,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,1.14579102687879,0.343706364687375,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0,0.526139422875686,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0.441182838239031,0.695603506861264 | |phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571301968807607,0,0.244981598429908,0.0958454710182364,0,1.10115880999389,2.68143409978894,1.38245879930619,0,0,0,1.3959149950069,1.68828783009504,0.45839474333043,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0.608930956624282,0.461230994512117,0.753613202763113,0.587943535678524,0.125666591329675,0,0,0,0,0,0,0,0.878342391034642,0.83778682725382,0,0,0,0,0.748953197024114,0.915001205637253,0,0.347648640384553,0.255715457330331,2.70124457927428,0.811206315338788,0,0.124406970610093,0,0,0.260240885925407,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.56880943980467,2.57865710502847,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0.460325236507177,1.14579102687879,0.343706364687375,1.37016503954128,0.755393897389701,0.675022500231806,1.35096360967266,0,0,0.103787347584177,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0,0,0.0846146078916765,0,0.526139422875686,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0.441182838239031,0.695603506861264 | ||
|short_description=p12@Eml1 | |short_description=p12@Eml1 | ||
}} | }} |
Latest revision as of 06:53, 26 September 2015
Short description: | p12@Eml1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Eml1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 31bp_to_ENSMUST00000054955_5end |
EntrezGene: | Eml1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.17e-22 | 3 |
neuron of the substantia nigra | 9.09e-11 | 3 |
CNS neuron (sensu Vertebrata) | 5.76e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.76e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.17e-22 | 3 |
reticular formation | 2.17e-22 | 3 |
medulla oblongata | 5.77e-16 | 2 |
brainstem | 5.77e-16 | 2 |
myelencephalon | 5.77e-16 | 2 |
future myelencephalon | 5.77e-16 | 2 |
regional part of nervous system | 1.65e-15 | 54 |
central nervous system | 1.35e-13 | 73 |
nervous system | 3.30e-13 | 75 |
neural tube | 9.03e-11 | 52 |
neural rod | 9.03e-11 | 52 |
future spinal cord | 9.03e-11 | 52 |
neural keel | 9.03e-11 | 52 |
substantia nigra | 9.09e-11 | 3 |
telencephalic nucleus | 9.09e-11 | 3 |
midbrain nucleus | 9.09e-11 | 3 |
neural nucleus | 9.09e-11 | 3 |
nucleus of brain | 9.09e-11 | 3 |
ectoderm-derived structure | 3.22e-10 | 95 |
ectoderm | 3.22e-10 | 95 |
presumptive ectoderm | 3.22e-10 | 95 |
regional part of brain | 1.29e-09 | 46 |
brain | 2.14e-09 | 47 |
future brain | 2.14e-09 | 47 |
neurectoderm | 1.34e-08 | 64 |
neural plate | 1.34e-08 | 64 |
presumptive neural plate | 1.34e-08 | 64 |
regional part of midbrain | 2.67e-08 | 4 |
midbrain | 2.67e-08 | 4 |
presumptive midbrain | 2.67e-08 | 4 |
midbrain neural tube | 2.67e-08 | 4 |
ecto-epithelium | 1.97e-07 | 73 |
occipital lobe | 5.44e-07 | 10 |
visual cortex | 5.44e-07 | 10 |
neocortex | 5.44e-07 | 10 |