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FFCP PHASE1:Mm9::chr7:25689435..25689478,+: Difference between revisions

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{{FFCP|EntrezGene=16801|HGNC=|MCL_coexpression_id=822|UniProt=Q61210|association_with_transcript=9bp_to_ENSMUST00000117419_5end|description=CAGE_peak_2_at_Arhgef1_5end|id=chr7:25689435..25689478,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.31e-17!94;UBERON:0007811!4.50e-15!86;UBERON:0000033!1.79e-10!63;UBERON:0001049!2.41e-10!52;UBERON:0005068!2.41e-10!52;UBERON:0006241!2.41e-10!52;UBERON:0007135!2.41e-10!52;UBERON:0000955!1.16e-09!50;UBERON:0006238!1.16e-09!50;UBERON:0003056!2.83e-09!49;UBERON:0002616!4.04e-09!49;UBERON:0002346!2.22e-08!71;UBERON:0003075!2.22e-08!71;UBERON:0007284!2.22e-08!71;UBERON:0003080!7.41e-08!40;UBERON:0002780!2.43e-07!39;UBERON:0001890!2.43e-07!39;UBERON:0006240!2.43e-07!39;UBERON:0002020!3.53e-07!34;UBERON:0000475!9.15e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.58e-10,54;UBERON:0001049,2.41e-10,52;UBERON:0005068,2.41e-10,52;UBERON:0006241,2.41e-10,52;UBERON:0007135,2.41e-10,52;UBERON:0010371,2.42e-10,73;UBERON:0002346,2.85e-10,64;UBERON:0003075,2.85e-10,64;UBERON:0007284,2.85e-10,64;UBERON:0003056,2.83e-09,49;UBERON:0000955,5.49e-09,47;UBERON:0006238,5.49e-09,47;UBERON:0002616,1.87e-08,46;UBERON:0003080,7.41e-08,40;UBERON:0002780,2.43e-07,39;UBERON:0001890,2.43e-07,39;UBERON:0006240,2.43e-07,39;UBERON:0002020,3.53e-07,34;UBERON:0000153,9.37e-07,43|phase1_expression=4.96461426024861,2.09385244583617,2.27499619694768,3.93203474698879,4.50806156951712,3.86122325397347,2.10251376535973,32.7973241541604,4.78681655315667,7.49006484230379,4.62288514208863,4.46724090373884,26.0225109495433,33.831695736152,4.99664642723494,8.90891176515234,2.79824751251259,12.7762176970086,12.4774134581222,11.4585205985468,7.05859308253879,11.9149141441062,10.1867917764185,5.43974237497583,3.89995777814189,1.72269589234506,3.01533397311352,2.37018355954478,2.47030445293286,4.03248207615889,1.77384408524244,6.35030673459631,10.4561013889377,0,5.77703239502549,3.32469290716985,3.87921776898501,2.92972141515835,2.3440060335714,1.0470474879476,4.1176204162171,2.04913645487534,2.42755176515577,2.89562681343828,1.72340783073175,4.77221555620372,2.34717403304412,1.52617609466313,1.97717564461025,2.72201858703997,1.81982348112971,1.43752564364972,14.0937389088499,30.4652099644765,19.4934403502629,1.54355661621568,2.57880095944881,3.09403255366465,5.26022798234954,11.6378015439847,7.60597684207415,3.04960078862219,3.55717918444456,1.3498495759221,0.988866362566974,1.4209602298922,3.29560121570245,3.07374644257244,4.56234294157302,5.67024940993101,3.99617426567626,10.5690864229407,7.73039893330647,4.65465037016825,5.75072826109418,3.67687514644008,7.70811166995721,7.66124028511126,7.37311359629969,8.70449499019279,8.05091263701205,8.33461392890816,9.77140496504833,11.2552522006336,8.70950012327818,6.77645746589436,8.39992916714707,9.69277118291563,2.04460721999597,1.43585964202892,6.37701875143691,2.58127163094416,2.03991400112325,4.85732872474035,3.89865850468601,1.79210754838934,2.66844398250329,2.55645483867087,1.55871602761721,2.12003744706204,9.85903938436764,1.28326477414318,5.09610479413291,0,1.94841936910093,2.78695852022608,1.51657333504435,3.88225191044804,18.3845897389492,4.00793775475027,3.29622120855658,3.95805121805784,4.15107895060905,4.82312449768392,5.99702406392095,3.01599819191221,3.46072954828123,2.74738778147832,7.96149496754887,10.3530783966342,6.18356251689102,4.363877278217,3.72783522436244,23.1296829639122,20.1068838540917,3.83185582812887,4.43315960671905,3.59941638596045,4.3203877204842,20.8208988772704,11.8950156732843,15.0785222535437,16.6871347384585,15.0872119824895,12.0517065844545,18.9822277789276,4.78645010096487,5.84712761867437,4.0435641349388,8.41767423545896,5.85541993332167,3.67843367093557,4.68161537493908,8.89158425230719,11.7022778540284,10.3772113430728,9.65127762965207,11.3829483125167,6.25147179505242,5.8622884852024,5.98233822157426,7.23345917010997,11.6779844674751,6.61679116392116,9.05441400194951,5.57295947091781,4.21327912387941,3.08817488537658,3.9782889915383,3.93538967817454,3.98694301967864,3.06105504483725,7.10234206755631,4.9191057936851,3.70241070929708,3.48800917125612,3.21928081679543,3.73649095574942,3.78487654801005,2.62667942526552,2.99954595319666,2.63159977365598,5.92785311285837,3.35516046900929,10.5144974282064,12.4514580978934,5.94753809370836,2.64450566663544,4.26576501070468,4.87697010906921,3.35055399437443,5.04208811558356,3.55804870151792,3.42406127002606,4.74529061544512,2.63518327558417,4.52403375840485,4.37704238490532,3.50935356814416,4.49409704327111,5.18731319699266,3.18626037206988,4.36236172192088,3.99869794134051,6.76246414038483,5.29493452397817,3.87904974335251,5.82127305089644,4.61626721007078,3.83786384746966,4.08196692387575,2.46794327843601,3.26097889795864,6.50695912292767,4.32429789249047,5.17182858485164,4.46292267054706,5.788251834058,2.5462585178142,3.74004978686054,6.64754429777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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=16801
|HGNC=
|MCL_coexpression_id=822
|TSSclassifier=NA
|UniProt=Q61210
|association_with_transcript=9bp_to_ENSMUST00000117419_5end
|cluster_id=chr7:25689435..25689478,+
|description=CAGE_peak_2_at_Arhgef1_5end
|id=chr7:25689435..25689478,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.58e-10,54;UBERON:0001049,2.41e-10,52;UBERON:0005068,2.41e-10,52;UBERON:0006241,2.41e-10,52;UBERON:0007135,2.41e-10,52;UBERON:0010371,2.42e-10,73;UBERON:0002346,2.85e-10,64;UBERON:0003075,2.85e-10,64;UBERON:0007284,2.85e-10,64;UBERON:0003056,2.83e-09,49;UBERON:0000955,5.49e-09,47;UBERON:0006238,5.49e-09,47;UBERON:0002616,1.87e-08,46;UBERON:0003080,7.41e-08,40;UBERON:0002780,2.43e-07,39;UBERON:0001890,2.43e-07,39;UBERON:0006240,2.43e-07,39;UBERON:0002020,3.53e-07,34;UBERON:0000153,9.37e-07,43
|phase1_expression=4.96461426024861,2.09385244583617,2.27499619694768,3.93203474698879,4.50806156951712,3.86122325397347,2.10251376535973,32.7973241541604,4.78681655315667,7.49006484230379,4.62288514208863,4.46724090373884,26.0225109495433,33.831695736152,4.99664642723494,8.90891176515234,2.79824751251259,12.7762176970086,12.4774134581222,11.4585205985468,7.05859308253879,11.9149141441062,10.1867917764185,5.43974237497583,3.89995777814189,1.72269589234506,3.01533397311352,2.37018355954478,2.47030445293286,4.03248207615889,1.77384408524244,6.35030673459631,10.4561013889377,0,5.77703239502549,3.32469290716985,3.87921776898501,2.92972141515835,2.3440060335714,1.0470474879476,4.1176204162171,2.04913645487534,2.42755176515577,2.89562681343828,1.72340783073175,4.77221555620372,2.34717403304412,1.52617609466313,1.97717564461025,2.72201858703997,1.81982348112971,1.43752564364972,14.0937389088499,30.4652099644765,19.4934403502629,1.54355661621568,2.57880095944881,3.09403255366465,5.26022798234954,11.6378015439847,7.60597684207415,3.04960078862219,3.55717918444456,1.3498495759221,0.988866362566974,1.4209602298922,3.29560121570245,3.07374644257244,4.56234294157302,5.67024940993101,3.99617426567626,10.5690864229407,7.73039893330647,4.65465037016825,5.75072826109418,3.67687514644008,7.70811166995721,7.66124028511126,7.37311359629969,8.70449499019279,8.05091263701205,8.33461392890816,9.77140496504833,11.2552522006336,8.70950012327818,6.77645746589436,8.39992916714707,9.69277118291563,2.04460721999597,1.43585964202892,6.37701875143691,2.58127163094416,2.03991400112325,4.85732872474035,3.89865850468601,1.79210754838934,2.66844398250329,2.55645483867087,1.55871602761721,2.12003744706204,9.85903938436764,1.28326477414318,5.09610479413291,0,1.94841936910093,2.78695852022608,1.51657333504435,3.88225191044804,18.3845897389492,4.00793775475027,3.29622120855658,3.95805121805784,4.15107895060905,4.82312449768392,5.99702406392095,3.01599819191221,3.46072954828123,2.74738778147832,7.96149496754887,10.3530783966342,6.18356251689102,4.363877278217,3.72783522436244,23.1296829639122,20.1068838540917,3.83185582812887,4.43315960671905,3.59941638596045,4.3203877204842,20.8208988772704,11.8950156732843,15.0785222535437,16.6871347384585,15.0872119824895,12.0517065844545,18.9822277789276,4.78645010096487,5.84712761867437,4.0435641349388,8.41767423545896,5.85541993332167,3.67843367093557,4.68161537493908,8.89158425230719,11.7022778540284,10.3772113430728,9.65127762965207,11.3829483125167,6.25147179505242,5.8622884852024,5.98233822157426,7.23345917010997,11.6779844674751,6.61679116392116,9.05441400194951,5.57295947091781,4.21327912387941,3.08817488537658,3.9782889915383,3.93538967817454,3.98694301967864,3.06105504483725,7.10234206755631,4.9191057936851,3.70241070929708,3.48800917125612,3.21928081679543,3.73649095574942,3.78487654801005,2.62667942526552,2.99954595319666,2.63159977365598,5.92785311285837,3.35516046900929,10.5144974282064,12.4514580978934,5.94753809370836,2.64450566663544,4.26576501070468,4.87697010906921,3.35055399437443,5.04208811558356,3.55804870151792,3.42406127002606,4.74529061544512,2.63518327558417,4.52403375840485,4.37704238490532,3.50935356814416,4.49409704327111,5.18731319699266,3.18626037206988,4.36236172192088,3.99869794134051,6.76246414038483,5.29493452397817,3.87904974335251,5.82127305089644,4.61626721007078,3.83786384746966,4.08196692387575,2.46794327843601,3.26097889795864,6.50695912292767,4.32429789249047,5.17182858485164,4.46292267054706,5.788251834058,2.5462585178142,3.74004978686054,6.64754429777645,3.56929837144506,2.87536413054709,4.46569137202204,4.36852742360385,4.04126204715379,3.22915344339442,3.37710464954357,4.98833613449833,4.54779388249163,5.21487924614483,6.11082308790677,6.57132695207806,8.04030035720716,4.28478553594825,7.80534591431195,7.09358148477859,4.4292937929755,4.14582398509466,4.91589944147214,5.00786447411097,4.48412081602686,0,0.54390568381871,7.37646409528554,9.93372286697037,16.8578119487182,20.0431984072667,2.62295912602681,2.01976741763498,1.89304931649754,3.12350995437311,4.30846795465598,1.91175038362042,2.89638276307112,3.67999490025482,1.61924280669958,3.21481443702443,3.55759000151871,25.3843839973228,5.25178315270594,5.1639025063504,5.86393053672874,4.78413356620353,5.30980553359851,6.31229654002952,4.53485335447127,5.09233715340925,5.02013217897314,6.45613810682248,3.87642439752332,2.90826983582004,3.20847640546249,5.68866164284469,4.21674434299995,5.15677716240934,12.5962654128902,4.50152735078276,6.20921682157222,4.50107773566344,7.62563004661776,4.99432689285798,7.40470592709544,8.82948352432338,5.86679270159276,17.1583977399694,6.83638033970382,4.9465875882444,5.16686165426898,4.40284351975538,4.41677672811605,5.0883678920969,5.53813589596716,15.0194494628513,6.4930934703184,6.19160603889667,4.07427960213366,5.65105371014073,7.38148829693536,8.23601423543482,9.00885678967433,10.216456019627,10.2267980615274,7.63736494412091,3.32152793260192,2.64315307264903,4.86024033698106,3.3454127362315,4.80397640241591,3.37160865962052,5.62043498932284,3.14107130380836,4.27729411862916,3.72803587852155,5.6369293868419,4.78452947340732,3.14371131868485,6.41688921535357,4.00395452780966,6.9272011451219,4.69428954583016,6.38001485735356,7.96931017635402,9.42178071221424,4.32045009386798,9.79634473947353,6.68993210457542,7.9087437016917,9.09445760844565,11.0996551313838,6.95384741734427,13.2214994471966,12.2582307554899,10.2985778947111,11.88826183818,12.0991422164209,11.5000299272908,12.6999630965235,13.4408437508804,3.62768613784338,4.21773311410723,2.51198798506532,2.85403847818933,5.40930863290133,5.06742683718191,4.02933573387983,5.14484109789758,7.52358156053045,11.2950368523413,13.3494318587081,9.73922372846974,11.6860163993708,13.7016503954128,9.82012066606611,11.4753825039407,11.2580300806055,6.34399372577886,9.31968561153276,3.1136204275253,5.58634822761443,6.4878770186571,8.75184181445858,5.03071590307158,6.61836630420051,5.11167473943715,4.12070114477788,6.73930340142812,6.82282471762253,5.83002389747551,6.97917463128482,5.71213195566283,5.89031402124797,6.03072424033939,5.23923060411381,4.86714168968393,5.01563973205633,7.82963211526283,4.85756436443511,5.48590803816665,4.96932257246145,5.00715998889374,4.79643174886684,6.30532848782715,5.92302255241735,5.12198324043763,6.05060336307039,6.79020569229309,5.05028044491965,5.81311588808453,4.53120618927592,4.09231043169689,5.26785260032284,6.94463799532109,13.4897712086491,5.84829021113521,9.88406848622172,11.6685882561994,6.61774257358547,7.41977073985349
|short_description=p2@Arhgef1
}}

Latest revision as of 09:58, 26 September 2015

Short description:p2@Arhgef1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Arhgef1_5end
Coexpression cluster:MCL_coexpression_mm9:822
Association with transcript: 9bp_to_ENSMUST00000117419_5end
EntrezGene:Arhgef1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Arhgef1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E932.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.49
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.47
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E426.02
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E833.83
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.91
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.48
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.46
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.06
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G610.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.77
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A214.09
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I930.47
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A119.49
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.70
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.05
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.69
Mouse Schwann, donor1.CNhs12507.11728-123D92.04
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.88
accessory axillary lymph node, adult.CNhs10475.1063-29H918.38
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I14.15
adrenal gland, embryo E18.CNhs11026.1262-18F54.82
adrenal gland, neonate N00.CNhs11191.1311-23C16.00
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H12.75
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F510.35
bone (os femoris), neonate N16.CNhs11225.1525-43A66.18
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B223.13
cerebellum, neonate N30.CNhs11135.1395-42I220.11
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.43
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.32
corpora quadrigemina, adult.CNhs10501.16-22A420.82
corpus striatum, adult.CNhs10487.19-21D811.90
corpus striatum, neonate N00.CNhs11226.630-43F115.08
cortex, adult.CNhs10473.12-14D516.69
cortex, neonate N30.CNhs11107.1392-42F215.09
diencephalon, adult.CNhs10482.20-12F212.05
diencephalon, neonate N30.CNhs11201.1388-42B218.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.85
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G48.42
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C94.68
eyeball, embryo E17.CNhs11023.1261-18D48.89
eyeball, neonate N00.CNhs11207.633-15C611.70
eyeball, neonate N01.CNhs11140.1532-43E710.38
eyeball, neonate N02.CNhs11205.1551-44G89.65
eyeball, neonate N16.CNhs11188.777-19A211.38
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H25.86
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A87.23
forelimb, embryo E15.CNhs11007.437-20E711.68
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B59.05
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E93.94
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E53.49
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E33.74
heart, neonate N03.CNhs11221.1349-25I23.78
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G13.00
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D23.36
hippocampus, adult.CNhs10478.13-16E810.51
hippocampus, neonate N00.CNhs11228.627-43G112.45
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D33.56
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G75.82
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I13.84
kidney, neonate N25.CNhs11122.1353-25F34.08
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F86.51
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E15.17
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F46.65
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A34.04
liver, neonate N25.CNhs11198.1368-26H13.23
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B14.99
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F85.21
lung, embryo E15.CNhs11020.432-17C56.11
lung, embryo E16.CNhs10998.458-17B66.57
lung, embryo E17.CNhs10605.480-44A68.04
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C67.81
lung, neonate N06.CNhs11212.683-20E57.09
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A44.92
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H24.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H29.93
medulla oblongata, adult.CNhs10477.17-12C216.86
medulla oblongata, neonate N30.CNhs11200.1396-42A320.04
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.89
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I925.38
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I45.86
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F46.31
pancreas, embryo E15.CNhs11042.1556-45F24.53
pancreas, embryo E16.CNhs11003.460-26E55.09
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G812.60
pituitary gland, embryo E12.CNhs11018.346-16E64.50
pituitary gland, embryo E13.CNhs11009.370-44C76.21
pituitary gland, embryo E14.CNhs11037.398-44A54.50
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F64.99
pituitary gland, embryo E17.CNhs11039.1265-44F57.40
pituitary gland, neonate N00.CNhs11190.1308-22E98.83
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G317.16
prostate, adult.CNhs10470.859-1F86.84
skin, adult.CNhs10492.30-1C34.95
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H34.40
skin, neonate N06.CNhs11097.693-20I54.42
skin, neonate N10.CNhs11108.762-6C45.09
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C915.02
spleen, adult.CNhs10465.25-2G26.49
spleen, embryo E16.CNhs11035.461-43C16.19
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H17.38
spleen, neonate N25.CNhs11099.1354-25G38.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C69.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.23
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E33.32
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D44.86
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C64.80
stomach, neonate N03.CNhs11193.1340-24B83.37
stomach, neonate N07.CNhs11210.718-18A95.62
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I14.28
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C53.14
testis, embryo E16.CNhs11033.470-26G56.42
testis, embryo E17.CNhs11029.486-18I54.00
testis, embryo E18.CNhs11027.503-18G56.93
testis, neonate N00.CNhs11189.1300-22B74.69
testis, neonate N07.CNhs11222.726-26I46.38
testis, neonate N10.CNhs11204.763-44D97.97
testis, neonate N20.CNhs11110.839-18H39.42
testis, neonate N30.CNhs11130.1391-42E24.32
thymus, adult.CNhs10471.38-12B59.80
thymus, embryo E14.CNhs11041.402-44I46.69
thymus, embryo E15.CNhs11005.430-45I27.91
thymus, embryo E16.CNhs11002.456-26C59.09
thymus, embryo E17.CNhs10581.478-18C111.10
thymus, embryo E18.CNhs10595.1273-19G46.95
thymus, neonate N02.CNhs11181.1541-43F813.22
thymus, neonate N03.CNhs11137.2104-43C712.26
thymus, neonate N06.CNhs11197.681-26C410.30
thymus, neonate N07.CNhs11211.713-19D311.89
thymus, neonate N10.CNhs11194.748-24E412.10
thymus, neonate N20.CNhs11186.820-7A211.50
thymus, neonate N25.CNhs11125.1362-25G712.70
thymus, neonate N30.CNhs11132.1393-42G213.44
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.85
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E54.03
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.34
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D28.75
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F26.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.89
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.27
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I513.49
whole body, embryo E18.CNhs10516.493-3B35.85
whole body, neonate N00.CNhs10525.657-19C29.88
whole body, neonate N01.CNhs10576.659-23C611.67
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.58e-1054
neural tube2.41e-1052
neural rod2.41e-1052
future spinal cord2.41e-1052
neural keel2.41e-1052
ecto-epithelium2.42e-1073
neurectoderm2.85e-1064
neural plate2.85e-1064
presumptive neural plate2.85e-1064
pre-chordal neural plate2.83e-0949
brain5.49e-0947
future brain5.49e-0947
regional part of brain1.87e-0846
anterior neural tube7.41e-0840
regional part of forebrain2.43e-0739
forebrain2.43e-0739
future forebrain2.43e-0739
gray matter3.53e-0734
anterior region of body9.37e-0743
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