FFCP PHASE1:Mm9::chr4:133556772..133556819,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67422 | |EntrezGene=67422 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q99KU1,A3KGL1 | |UniProt=Q99KU1,A3KGL1 | ||
|association_with_transcript=0bp_to_ENSMUST00000012262,ENSMUST00000105887,ENSMUST00000144668,ENSMUST00000146241,NM_026144,uc008vds.1,uc008vdt.1,uc008vdu.1,uc008vdv.1_5end | |association_with_transcript=0bp_to_ENSMUST00000012262,ENSMUST00000105887,ENSMUST00000144668,ENSMUST00000146241,NM_026144,uc008vds.1,uc008vdt.1,uc008vdu.1,uc008vdv.1_5end | ||
|cluster_id=chr4:133556772..133556819,- | |||
|description=CAGE_peak_1_at_Dhdds_5end | |description=CAGE_peak_1_at_Dhdds_5end | ||
|id=chr4:133556772..133556819,- | |id=chr4:133556772..133556819,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.89e-14!63;UBERON:0000955!3.60e-11!50;UBERON:0006238!3.60e-11!50;UBERON:0002616!1.14e-10!49;UBERON:0003056!2.23e-10!49;UBERON:0002346!4.51e-10!71;UBERON:0003075!4.51e-10!71;UBERON:0007284!4.51e-10!71;UBERON:0001049!3.75e-09!52;UBERON:0005068!3.75e-09!52;UBERON:0006241!3.75e-09!52;UBERON:0007135!3.75e-09!52;UBERON:0000153!3.07e-08!94;UBERON:0000475!3.24e-08!200;UBERON:0003080!4.40e-08!40;UBERON:0007811!6.40e-08!86;UBERON:0002780!1.43e-07!39;UBERON:0001890!1.43e-07!39;UBERON:0006240!1.43e-07!39;UBERON:0007023!1.68e-07!51;UBERON:0004121!2.44e-07!102;UBERON:0000924!2.44e-07!102;UBERON:0006601!2.44e-07!102;UBERON:0000062!7.48e-07!269 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.23e-10,49;UBERON:0000955,6.96e-10,47;UBERON:0006238,6.96e-10,47;UBERON:0000073,7.63e-10,54;UBERON:0002346,8.22e-10,64;UBERON:0003075,8.22e-10,64;UBERON:0007284,8.22e-10,64;UBERON:0002616,2.11e-09,46;UBERON:0001049,3.75e-09,52;UBERON:0005068,3.75e-09,52;UBERON:0006241,3.75e-09,52;UBERON:0007135,3.75e-09,52;UBERON:0010371,4.28e-08,73;UBERON:0003080,4.40e-08,40;UBERON:0002780,1.43e-07,39;UBERON:0001890,1.43e-07,39;UBERON:0006240,1.43e-07,39;UBERON:0007023,1.68e-07,51;UBERON:0004121,6.28e-07,95;UBERON:0000924,6.28e-07,95;UBERON:0006601,6.28e-07,95 | |||
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| |phase1_expression=25.4636666896622,13.2610654902957,13.6499771816861,15.1232105653415,14.5259761684441,18.8024784541317,22.4268134971705,13.5579489613655,4.36445038670167,1.87251621057595,15.2383991720699,13.8005835061932,16.9488722631894,15.1237296184865,16.9885978525988,22.6772299476605,19.5877325875881,20.0318475002481,23.3094537129756,22.4926515452956,26.788636397587,24.0284101906142,29.2543763835608,21.1189998087297,16.9762867989706,20.6723507081407,13.3536218809313,16.5912849168135,17.8622014288991,18.9022597319948,19.2905544270115,17.7808588568697,27.0628506537211,15.8481681015439,28.3074587356249,28.5923590016607,25.9295082453209,55.2461752572718,42.1921086042852,80.0991328279911,82.940639812373,56.0097297665925,67.9714494243615,12.7155786155333,11.7597240214637,9.36088436024576,16.4302182313088,25.0728929837513,28.9985761209503,22.9427280907654,29.2571621197008,24.4379359420452,18.9594344845242,10.1550699881588,13.1076581665561,13.3774906738692,21.203474555468,16.5015069528782,19.2200637816618,25.9205579843296,14.5781222806421,22.0248945844936,24.9002542911119,29.2467408116455,26.6993917893083,21.314403448383,25.4660093940644,26.8952813725088,22.1895770340142,22.9510095163874,23.7667206327062,26.2798905651499,32.6885440608388,19.8435094728226,27.1242682981609,29.4150011715207,36.3382407297983,37.0293280447044,31.4893393175299,18.8597391454177,26.1654660702892,20.3156214517136,37.9688878641878,33.7657566019008,33.6156145108982,18.2669722993674,22.3523538854592,18.4535451367048,14.0093457666391,18.8928900266964,23.4790235848359,24.9522924324602,15.6393406752783,30.2233787317178,28.5901623676974,20.1612099193801,26.1226621445058,18.5769051610083,21.0426663728324,17.666978725517,21.9715734851622,24.3820307087204,5.09610479413291,14.2213340630666,12.5564803786504,10.6411143499541,12.1325866803548,17.127581957859,28.7421050848361,28.3524485613815,26.3697696684527,21.3125834818499,26.0595511899346,23.8141772073144,21.0483785772912,25.8873178139131,28.1802263217186,20.3885093257075,35.384422077995,19.8973225435313,22.3049933644997,25.6983884161668,20.5030937339934,37.1831612204665,41.6798946558776,20.4365644166873,19.2902350454532,20.9965955847693,23.2538515543708,52.4267237916879,44.3775584734068,25.8847965352501,42.9346070874923,36.8230258555676,41.7653969564716,38.4511793470586,21.6917845001174,23.5129174453076,36.6447999728828,29.8827435358793,26.5445703643916,25.9789378009824,26.829257340997,26.6747527569216,24.8333221902347,30.4910654277942,34.7633398116594,35.4423617912451,21.5567992932842,23.6382600209774,30.6154956045271,21.2619860454748,25.8583941779806,22.6363908239408,23.2533814140976,20.8985980159418,23.87524836865,24.1907032687832,27.2796959419769,19.8840741634082,18.0585066185444,17.8261440846405,24.3847077652767,22.8246508826988,19.7461904495844,23.0208605302904,19.047411499373,18.9159854634815,22.0510198884064,22.490942578836,17.1055188141756,18.5673984030172,21.9550115291051,24.4255682143877,39.9550902271842,22.9477285605804,20.4859645449955,23.800550999719,22.6085545567348,27.1716906076713,26.4178295710291,25.2104405779178,23.3496946037114,28.3436182907713,18.9811624617805,26.1871338011177,26.8928673416288,21.8852119245266,22.6158341058179,24.268124033664,20.9653908378453,16.7278669533668,20.4841333029328,20.6789807823609,16.9061603509621,27.0856266034268,24.4380133831208,21.8823758057794,22.8283899018569,27.0126570802672,24.3348028154131,21.3477093584715,24.0126627940591,23.1914696945371,17.2971915699619,21.1370385641763,17.2431103180227,23.153007336232,23.4255783638906,21.0018180339092,12.9708181420028,25.5342114264916,17.2521847832825,13.3970741160661,19.9704110793319,20.9640468696103,32.650329260988,16.4030797263545,27.7129785249907,20.2755810594419,28.8448008302386,22.0668611507745,27.9281395463317,27.303519963016,23.5663204477154,19.7084984336377,25.0639879128844,21.0391455166336,24.237124835938,28.1844901311069,32.2920916089225,28.6405135991393,28.6503439484617,17.4049818821987,33.9317348383135,35.5958402733105,46.8807722764353,46.8846746368813,12.2951209032507,14.895784705058,18.2994767261429,14.4462335389756,19.6035291936847,16.9667846546312,18.9378872970035,15.286132662597,21.8597778904443,12.8592577480977,13.0444966722353,41.4504498184131,23.9878744001974,33.476333489444,20.6866438379042,30.6844428728916,38.4960901185892,25.734747432428,32.6509441521931,34.7033346750853,46.0670952894006,45.8078370436452,22.7416897988035,29.8097658171555,28.8762876491624,45.1932563848217,48.4925599444994,41.2542172992747,65.3644043047273,24.4883087882582,32.8571056808196,25.7204442037911,29.793159251902,23.3663151058712,31.5934119556072,34.4045392499497,20.4164386015428,23.0896957241564,77.8465245134016,15.8290802823821,16.4693715229824,19.2398230520817,16.8315005044422,19.2044852701722,23.9014286036478,55.6275906031529,21.1879892189337,26.4175190992925,20.7417870654077,21.8507410125442,16.9500842374071,21.0475919350001,18.1876920093425,19.8731062299594,16.7221968303353,27.6854479224383,25.465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| ||
|short_description=p1@Dhdds | |short_description=p1@Dhdds | ||
}} | }} |
Latest revision as of 11:51, 26 September 2015
Short description: | p1@Dhdds |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dhdds_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000012262, ENSMUST00000105887, ENSMUST00000144668, ENSMUST00000146241, NM_026144, uc008vds.1, uc008vdt.1, uc008vdu.1, uc008vdv.1_5end |
EntrezGene: | Dhdds |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 2.23e-10 | 49 |
brain | 6.96e-10 | 47 |
future brain | 6.96e-10 | 47 |
regional part of nervous system | 7.63e-10 | 54 |
neurectoderm | 8.22e-10 | 64 |
neural plate | 8.22e-10 | 64 |
presumptive neural plate | 8.22e-10 | 64 |
regional part of brain | 2.11e-09 | 46 |
neural tube | 3.75e-09 | 52 |
neural rod | 3.75e-09 | 52 |
future spinal cord | 3.75e-09 | 52 |
neural keel | 3.75e-09 | 52 |
ecto-epithelium | 4.28e-08 | 73 |
anterior neural tube | 4.40e-08 | 40 |
regional part of forebrain | 1.43e-07 | 39 |
forebrain | 1.43e-07 | 39 |
future forebrain | 1.43e-07 | 39 |
adult organism | 1.68e-07 | 51 |
ectoderm-derived structure | 6.28e-07 | 95 |
ectoderm | 6.28e-07 | 95 |
presumptive ectoderm | 6.28e-07 | 95 |