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FFCP PHASE1:Mm9::chr6:124838210..124838235,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr6:124838210..124838235,-
|DHSsupport=NA
|short_description=p1@Cd4
|DPIdataset=NA
|description=CAGE_peak_1_at_Cd4_5end
|association_with_transcript=0bp_to_ENSMUST00000130378,ENSMUST00000151594,NM_013488,uc009dsi.1,uc009dsj.1,uc009dsk.1_5end
|EntrezGene=12504
|EntrezGene=12504
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=P06332,Q3TSV7
|UniProt=P06332,Q3TSV7
|association_with_transcript=0bp_to_ENSMUST00000130378,ENSMUST00000151594,NM_013488,uc009dsi.1,uc009dsj.1,uc009dsk.1_5end
|cluster_id=chr6:124838210..124838235,-
|description=CAGE_peak_1_at_Cd4_5end
|id=chr6:124838210..124838235,-
|ontology_enrichment_celltype=CL:0000624!9.15e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000624,4.88e-09,8;CL:0000791,9.89e-08,9;CL:0000789,9.89e-08,9;CL:0002420,9.89e-08,9;CL:0002419,9.89e-08,9;CL:0000790,9.89e-08,9;CL:0000893,4.01e-07,6;CL:0002489,4.01e-07,6;CL:0000898,4.01e-07,6;CL:0000809,4.01e-07,6;CL:0000810,4.01e-07,6;CL:0000895,4.01e-07,6;CL:0000808,4.01e-07,6;CL:0000894,4.01e-07,6;CL:0000806,4.01e-07,6;CL:0000807,4.01e-07,6;CL:0000805,4.01e-07,6;CL:0002425,4.01e-07,6;CL:0002436,4.01e-07,6;CL:0002427,4.01e-07,6;CL:0002428,4.01e-07,6;CL:0002429,4.01e-07,6;CL:0002433,4.01e-07,6;CL:0002431,4.01e-07,6;CL:0002432,4.01e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!3.05e-13!48;UBERON:0004177!1.39e-12!29;UBERON:0002390!2.50e-12!45;UBERON:0003061!2.50e-12!45;UBERON:0003408!2.56e-10!24;UBERON:0001007!3.28e-10!128;UBERON:0001555!3.28e-10!128;UBERON:0007026!3.28e-10!128;UBERON:0004921!7.62e-10!126;UBERON:0004185!7.62e-10!126;UBERON:0002370!8.01e-10!23;UBERON:0000974!8.01e-10!23;UBERON:0004807!8.01e-10!23;UBERON:0005058!8.01e-10!23;UBERON:0003351!8.01e-10!23;UBERON:0009113!8.01e-10!23;UBERON:0003295!8.01e-10!23;UBERON:0009722!8.01e-10!23;UBERON:0005562!8.01e-10!23;UBERON:0007690!8.01e-10!23;UBERON:0004119!8.63e-10!130;UBERON:0000925!8.63e-10!130;UBERON:0006595!8.63e-10!130;UBERON:0006562!6.35e-09!24;UBERON:0001557!6.35e-09!24;UBERON:0001042!6.35e-09!24;UBERON:0008814!6.35e-09!24;UBERON:0009145!6.35e-09!24;UBERON:0000077!6.77e-08!97;UBERON:0001041!7.31e-08!92;UBERON:0001004!7.79e-08!42;UBERON:0002405!1.35e-07!70;UBERON:0000065!2.03e-07!41;UBERON:0003081!3.21e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.23e-18,48;UBERON:0002405,1.23e-18,48;UBERON:0002390,5.74e-18,45;UBERON:0003061,5.74e-18,45;UBERON:0004177,3.53e-17,29;UBERON:0005057,3.53e-17,29;UBERON:0000077,1.74e-14,35;UBERON:0003408,6.21e-14,24;UBERON:0002370,3.17e-13,23;UBERON:0000974,3.17e-13,23;UBERON:0004807,3.17e-13,23;UBERON:0005058,3.17e-13,23;UBERON:0003351,3.17e-13,23;UBERON:0009113,3.17e-13,23;UBERON:0003295,3.17e-13,23;UBERON:0009722,3.17e-13,23;UBERON:0005562,3.17e-13,23;UBERON:0007690,3.17e-13,23;UBERON:0006562,2.29e-12,24;UBERON:0001557,2.29e-12,24;UBERON:0001042,2.29e-12,24;UBERON:0008814,2.29e-12,24;UBERON:0009145,2.29e-12,24;UBERON:0001004,4.85e-12,42;UBERON:0001007,1.28e-11,116;UBERON:0001555,1.28e-11,116;UBERON:0007026,1.28e-11,116;UBERON:0004921,1.70e-11,114;UBERON:0000065,2.05e-11,41;UBERON:0004119,4.06e-11,118;UBERON:0000925,4.06e-11,118;UBERON:0006595,4.06e-11,118;UBERON:0000072,3.37e-10,27;UBERON:0003081,5.33e-10,87;UBERON:0001041,1.12e-08,80;UBERON:0007811,1.65e-07,36
|phase1_expression=0.320297694209588,0,0,0,0,0,0,217.314553352173,121.359878494737,125.926715161232,85.6089841127525,87.270741940898,278.543587598072,350.730654505018,1.66554880907831,4.04950534779652,2.09868563438444,12.7762176970086,13.8485577941796,5.09267582157636,11.3107575900923,0.0992909512008853,0,0.639969691173627,2.06468352960453,0.57423196411502,0,0,1.90023419456374,1.76421090831952,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,239.369506863744,0.672187598284928,0,0.286533439938757,0,0,0,0,0,0,11.2487464660175,23.7327927016074,10.6572017241915,0.299600110518405,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,8.98844288843212,0,0,0,0.14084341977668,0,0,0,0,0,0,10.5049169341535,134.647699496529,2.22663208597237,0.173485326766136,0,0.230615497256059,0.60289056221049,0.352766121407114,0.251333182659351,0,0.722996784599558,11.4999371753484,0.647067399789637,2.20841518460394,2.42437626567611,3.72783522436244,0,0,5.62005521458901,0.718890747035522,0.599902730993408,0.762421362438388,0.149790639404823,0,0,0.173824320192276,0,0,0,0.509196819251581,3.23458123586242,0.505445516867349,1.05220927943237,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0.219195732427575,0,0.696504333044333,0.823128545631774,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,2.91913355917924,0.329119699826961,2.46251196118643,3.4859588104718,4.23979963533464,2.41505126820156,1.74468344388483,0,0.205809224758569,3.63460661282178,2.3800550999719,0,0,0.902072229254653,1.00841762311671,0.667134131534611,1.52180500890047,0.949058123089023,1.4822905925161,2.5133520880027,4.97391180102877,3.70431765526328,2.69645822596266,4.32276099749388,3.78368419183298,0,0.228497025219458,0,0,0,0.210407459670956,0.316182685621286,0.442830443938806,1.09899109488962,0.370191491765402,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0,2.87536413054709,1.48856379067401,2.18426371180192,0.505157755894224,0.179397413521912,0.964887042726734,8.68339993783042,0,0,0,0.234690248288502,3.85264392116176,0,0.780534591431195,3.4679731703362,1.7717175171902,3.98636921643718,6.39066927391378,6.56202931090403,3.90552458170081,0,0,4.91764273019036,4.96686143348518,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.890328018336276,0.651547837414304,1.48473110675282,2.65490276679926,0.242780636154981,0.906970670894253,0.377210159511796,0.295301892880773,0.922305443831782,1.29214146584111,2.90826983582004,1.42598951353889,7.26884543252377,0,1.03135543248187,0.340439605753788,0,0,0.428674070063185,0.177340233642274,0,0.164549020602121,0,0,0.21183207086382,0.661585194164886,1.6488625294148,0.968786560175433,0.784068024066026,0.954978752025092,1.14898629821543,4.95517422270746,0,16.0618627949982,1.65109494370578,1.48155621895769,6.59289599516419,14.7629765938707,13.0403558727718,2.03974115992626,4.05859211738608,3.31679937130617,1.90934123603023,0.316335993581135,0.406638934253697,0.648032044930808,0.627264888043406,0,0.674321731924103,1.73572257023205,1.30877970992015,2.20345454596048,5.59205381778233,0,0,0,0,0,0.168956125490778,0.234714477291508,0.2604087696879,0.419437377702843,0.241584120826006,0,374.789189065019,0.405450430580328,0.821687657318618,11.8227948909793,78.4136927023569,183.581571817889,225.727054198501,238.666275914117,332.280586779354,319.306519884449,428.813765386983,421.11550267647,413.326071686855,537.86750383958,0,0,0,0,1.35232715822533,0.187682475451182,0.549454872801795,1.07184189539533,1.00314420807073,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,1.23621034343337,0.320919209591815,0.505394423527595,0.760437899670719,1.13175804831646,1.21733959710847,0.704276676453562,0.976402972245426,0.952587382566147,0.579421629724277,1.35036454324594,0.824171801606613,0.735994600671987,0.342869252385415,0.532427418478012,0.715308569841963,0.872078499793971,0.752875043322645,0.676916863133412,1.09756783723664,0.526139422875686,0.271608227691724,0,0.118635018124174,0.788035859004508,0.818462086339379,1.23949472948773,0.964533054905707,0.499621155875892,1.16965804222704,1.71896843238639,1.3390183244819,1.10295709559758,2.31867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,217.314553352173,121.359878494737,125.926715161232,85.6089841127525,87.270741940898,278.543587598072,350.730654505018,1.66554880907831,4.04950534779652,2.09868563438444,12.7762176970086,13.8485577941796,5.09267582157636,11.3107575900923,0.0992909512008853,0,0.639969691173627,2.06468352960453,0.57423196411502,0,0,1.90023419456374,1.76421090831952,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,239.369506863744,0.672187598284928,0,0.286533439938757,0,0,0,0,0,0,11.2487464660175,23.7327927016074,10.6572017241915,0.299600110518405,0,0,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0.075726193333184,0,0,0,0,0,0,0,8.98844288843212,0,0,0,0.14084341977668,0,0,0,0,0,0,10.5049169341535,134.647699496529,2.22663208597237,0.173485326766136,0,0.230615497256059,0.60289056221049,0.352766121407114,0.251333182659351,0,0.722996784599558,11.4999371753484,0.647067399789637,2.20841518460394,2.42437626567611,3.72783522436244,0,0,5.62005521458901,0.718890747035522,0.599902730993408,0.762421362438388,0.149790639404823,0,0,0.173824320192276,0,0,0,0.509196819251581,3.23458123586242,0.505445516867349,1.05220927943237,0.130120442962704,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0.219195732427575,0,0.696504333044333,0.823128545631774,0,0,0.257347907114715,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,2.91913355917924,0.329119699826961,2.46251196118643,3.4859588104718,4.23979963533464,2.41505126820156,1.74468344388483,0,0.205809224758569,3.63460661282178,2.3800550999719,0,0,0.902072229254653,1.00841762311671,0.667134131534611,1.52180500890047,0.949058123089023,1.4822905925161,2.5133520880027,4.97391180102877,3.70431765526328,2.69645822596266,4.32276099749388,3.78368419183298,0,0.228497025219458,0,0,0,0.210407459670956,0.316182685621286,0.442830443938806,1.09899109488962,0.370191491765402,0.296452627087149,0.166845105716094,0,0,0,0.241177159752417,0,0.287696137450811,0.324270453550071,0,2.87536413054709,1.48856379067401,2.18426371180192,0.505157755894224,0.179397413521912,0.964887042726734,8.68339993783042,0,0,0,0.234690248288502,3.85264392116176,0,0.780534591431195,3.4679731703362,1.7717175171902,3.98636921643718,6.39066927391378,6.56202931090403,3.90552458170081,0,0,4.91764273019036,4.96686143348518,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.890328018336276,0.651547837414304,1.48473110675282,2.65490276679926,0.242780636154981,0.906970670894253,0.377210159511796,0.295301892880773,0.922305443831782,1.29214146584111,2.90826983582004,1.42598951353889,7.26884543252377,0,1.03135543248187,0.340439605753788,0,0,0.428674070063185,0.177340233642274,0,0.164549020602121,0,0,0.21183207086382,0.661585194164886,1.6488625294148,0.968786560175433,0.784068024066026,0.954978752025092,1.14898629821543,4.95517422270746,0,16.0618627949982,1.65109494370578,1.48155621895769,6.59289599516419,14.7629765938707,13.0403558727718,2.03974115992626,4.05859211738608,3.31679937130617,1.90934123603023,0.316335993581135,0.406638934253697,0.648032044930808,0.627264888043406,0,0.674321731924103,1.73572257023205,1.30877970992015,2.20345454596048,5.59205381778233,0,0,0,0,0,0.168956125490778,0.234714477291508,0.2604087696879,0.419437377702843,0.241584120826006,0,374.789189065019,0.405450430580328,0.821687657318618,11.8227948909793,78.4136927023569,183.581571817889,225.727054198501,238.666275914117,332.280586779354,319.306519884449,428.813765386983,421.11550267647,413.326071686855,537.86750383958,0,0,0,0,1.35232715822533,0.187682475451182,0.549454872801795,1.07184189539533,1.00314420807073,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0.222246727801615,1.23621034343337,0.320919209591815,0.505394423527595,0.760437899670719,1.13175804831646,1.21733959710847,0.704276676453562,0.976402972245426,0.952587382566147,0.579421629724277,1.35036454324594,0.824171801606613,0.735994600671987,0.342869252385415,0.532427418478012,0.715308569841963,0.872078499793971,0.752875043322645,0.676916863133412,1.09756783723664,0.526139422875686,0.271608227691724,0,0.118635018124174,0.788035859004508,0.818462086339379,1.23949472948773,0.964533054905707,0.499621155875892,1.16965804222704,1.71896843238639,1.3390183244819,1.10295709559758,2.31867835620421
|short_description=p1@Cd4
}}
}}

Latest revision as of 16:26, 26 September 2015

Short description:p1@Cd4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cd4_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 0bp_to_ENSMUST00000130378, ENSMUST00000151594, NM_013488, uc009dsi.1, uc009dsj.1, uc009dsk.1_5end
EntrezGene:Cd4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cd4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9217.31
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7121.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2125.93
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E685.61
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F187.27
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4278.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8350.73
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.05
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.85
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9239.37
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E723.73
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.50
accessory axillary lymph node, adult.CNhs10475.1063-29H9134.65
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G211.50
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E32.92
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G13.49
heart, neonate N20.CNhs11127.821-26I64.24
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F24.97
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B18.68
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A46.39
lung, neonate N25.CNhs11119.1359-25C76.56
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G216.06
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D16.59
spleen, neonate N20.CNhs11112.824-19H114.76
spleen, neonate N25.CNhs11099.1354-25G313.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.74
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B5374.79
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C511.82
thymus, embryo E17.CNhs10581.478-18C178.41
thymus, embryo E18.CNhs10595.1273-19G4183.58
thymus, neonate N02.CNhs11181.1541-43F8225.73
thymus, neonate N03.CNhs11137.2104-43C7238.67
thymus, neonate N06.CNhs11197.681-26C4332.28
thymus, neonate N07.CNhs11211.713-19D3319.31
thymus, neonate N10.CNhs11194.748-24E4428.81
thymus, neonate N20.CNhs11186.820-7A2421.12
thymus, neonate N25.CNhs11125.1362-25G7413.33
thymus, neonate N30.CNhs11132.1393-42G2537.87
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CD4-positive, alpha-beta T cell4.88e-098
mature alpha-beta T cell9.89e-089
alpha-beta T cell9.89e-089
immature T cell9.89e-089
mature T cell9.89e-089
immature alpha-beta T cell9.89e-089
thymocyte4.01e-076
double negative thymocyte4.01e-076
naive T cell4.01e-076
double-positive, alpha-beta thymocyte4.01e-076
CD4-positive, alpha-beta thymocyte4.01e-076
naive thymus-derived CD4-positive, alpha-beta T cell4.01e-076
DN4 thymocyte4.01e-076
DN1 thymic pro-T cell4.01e-076
DN2 thymocyte4.01e-076
DN3 thymocyte4.01e-076
immature single positive thymocyte4.01e-076
early T lineage precursor4.01e-076
mature CD4 single-positive thymocyte4.01e-076
resting double-positive thymocyte4.01e-076
double-positive blast4.01e-076
CD69-positive double-positive thymocyte4.01e-076
CD69-positive, CD4-positive single-positive thymocyte4.01e-076
CD4-positive, CD8-intermediate double-positive thymocyte4.01e-076
CD24-positive, CD4 single-positive thymocyte4.01e-076

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.23e-1848
immune system1.23e-1848
hematopoietic system5.74e-1845
blood island5.74e-1845
hemopoietic organ3.53e-1729
immune organ3.53e-1729
mixed endoderm/mesoderm-derived structure1.74e-1435
gland of gut6.21e-1424
thymus3.17e-1323
neck3.17e-1323
respiratory system epithelium3.17e-1323
hemolymphoid system gland3.17e-1323
pharyngeal epithelium3.17e-1323
thymic region3.17e-1323
pharyngeal gland3.17e-1323
entire pharyngeal arch endoderm3.17e-1323
thymus primordium3.17e-1323
early pharyngeal endoderm3.17e-1323
pharynx2.29e-1224
upper respiratory tract2.29e-1224
chordate pharynx2.29e-1224
pharyngeal arch system2.29e-1224
pharyngeal region of foregut2.29e-1224
respiratory system4.85e-1242
digestive system1.28e-11116
digestive tract1.28e-11116
primitive gut1.28e-11116
subdivision of digestive tract1.70e-11114
respiratory tract2.05e-1141
endoderm-derived structure4.06e-11118
endoderm4.06e-11118
presumptive endoderm4.06e-11118
segment of respiratory tract3.37e-1027
lateral plate mesoderm5.33e-1087
foregut1.12e-0880
craniocervical region1.65e-0736
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