FFCP PHASE1:Mm9::chr4:149072749..149072763,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:149072749..149072763,-
|short_description=p4@Pik3cd
|description=CAGE_peak_4_at_Pik3cd_5end
|association_with_transcript=-36bp_to_ENSMUST00000146612_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18707 | |EntrezGene=18707 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=B1AS26 | |UniProt=B1AS26 | ||
|association_with_transcript=-36bp_to_ENSMUST00000146612_5end | |||
|cluster_id=chr4:149072749..149072763,- | |||
|description=CAGE_peak_4_at_Pik3cd_5end | |||
|id=chr4:149072749..149072763,- | |||
|ontology_enrichment_celltype=CL:0000988!1.81e-12!32;CL:0002032!1.81e-12!32;CL:0000037!1.81e-12!32;CL:0000566!1.81e-12!32;CL:0000837!1.81e-12!32;CL:0002031!1.16e-10!25;CL:0000738!1.03e-08!17;CL:0002087!1.03e-08!17;CL:0000838!4.12e-08!12;CL:0000084!1.65e-07!11;CL:0000827!1.65e-07!11;CL:0002320!3.05e-07!46;CL:0000134!3.05e-07!46;CL:0000049!5.32e-07!19;CL:0000542!9.05e-07!13;CL:0000051!9.05e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.75e-19,32;CL:0002032,2.75e-19,32;CL:0000037,2.75e-19,32;CL:0000837,2.75e-19,32;CL:0002031,4.94e-16,25;CL:0002320,1.04e-13,46;CL:0000134,1.04e-13,46;CL:0000738,1.40e-12,17;CL:0002087,1.40e-12,17;CL:0000838,5.56e-11,12;CL:0000049,1.24e-10,19;CL:0000084,4.04e-10,11;CL:0000827,4.04e-10,11;CL:0000219,6.17e-10,54;CL:0000542,8.84e-10,13;CL:0000051,8.84e-10,13;CL:0000763,8.86e-09,16;CL:0000791,1.57e-08,9;CL:0000789,1.57e-08,9;CL:0002420,1.57e-08,9;CL:0002419,1.57e-08,9;CL:0000790,1.57e-08,9;CL:0000624,1.50e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.35e-18!48;UBERON:0002405!2.45e-17!70;UBERON:0002390!6.84e-17!45;UBERON:0003061!6.84e-17!45;UBERON:0004177!7.11e-10!29;UBERON:0005057!1.95e-09!51;UBERON:0003081!3.70e-08!88;UBERON:0002371!5.53e-08!16;UBERON:0001474!9.43e-08!22;UBERON:0004765!9.43e-08!22;UBERON:0001434!9.43e-08!22;UBERON:0003408!2.51e-07!24;UBERON:0002384!3.05e-07!46;UBERON:0002370!3.40e-07!23;UBERON:0000974!3.40e-07!23;UBERON:0004807!3.40e-07!23;UBERON:0005058!3.40e-07!23;UBERON:0003351!3.40e-07!23;UBERON:0009113!3.40e-07!23;UBERON:0003295!3.40e-07!23;UBERON:0009722!3.40e-07!23;UBERON:0005562!3.40e-07!23;UBERON:0007690!3.40e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.91e-28,48;UBERON:0002405,3.91e-28,48;UBERON:0002390,2.18e-26,45;UBERON:0003061,2.18e-26,45;UBERON:0004177,2.14e-15,29;UBERON:0005057,2.14e-15,29;UBERON:0002384,1.04e-13,46;UBERON:0001474,5.59e-12,22;UBERON:0004765,5.59e-12,22;UBERON:0001434,5.59e-12,22;UBERON:0003081,8.90e-12,87;UBERON:0003408,1.35e-11,24;UBERON:0002371,1.62e-11,16;UBERON:0002370,2.00e-11,23;UBERON:0000974,2.00e-11,23;UBERON:0004807,2.00e-11,23;UBERON:0005058,2.00e-11,23;UBERON:0003351,2.00e-11,23;UBERON:0009113,2.00e-11,23;UBERON:0003295,2.00e-11,23;UBERON:0009722,2.00e-11,23;UBERON:0005562,2.00e-11,23;UBERON:0007690,2.00e-11,23;UBERON:0000077,4.19e-11,35;UBERON:0006562,1.20e-10,24;UBERON:0001557,1.20e-10,24;UBERON:0001042,1.20e-10,24;UBERON:0008814,1.20e-10,24;UBERON:0009145,1.20e-10,24;UBERON:0002204,1.78e-10,32;UBERON:0001041,1.17e-09,80;UBERON:0001004,2.43e-09,42;UBERON:0000065,4.04e-09,41;UBERON:0000072,1.09e-08,27;UBERON:0000926,1.99e-08,120;UBERON:0004120,1.99e-08,120;UBERON:0006603,1.99e-08,120;UBERON:0005911,8.17e-08,69 | |||
|phase1_expression=0,0,0.909998478779072,0,0,0,0,30.9895976259783,6.19470377467334,11.2350972634557,2.05461561870606,5.58405112967355,32.1857372270667,34.705899760342,5.99597571268193,3.84703008040669,0,14.0380663584416,12.8887567589394,16.1268067683251,0.935476191661768,13.007114607316,10.9703911438353,1.75991665072747,1.83527424853736,0.57423196411502,1.7230479846363,0.215471232685889,0,0.756090389279792,0.665191531965914,3.17515336729816,1.84519436275371,0,0,0,0,40.1790365507431,25.7840663692854,36.6466620781659,52.3526024347603,56.692775251551,39.3263385955234,0,0,0,0.782391344348039,0,0,0,0,0,16.9460432118314,37.7188313845899,40.3312558970957,0.257259436035947,0,0.515672092277442,0,0.528990979272033,0,0.677689064138264,0,20.2477436388315,30.6548572395762,26.2877642530057,5.99200221036809,3.84218305321555,0.103689612308478,0,0,0.571301968807607,0.662605622854841,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.127687338085188,0,0,0.182975287204819,0.52091337055676,0.279182999001381,0,0,0.589257170947335,0.284743361598206,0.186399445825301,0.151452386666368,0,0.289864488701678,0,0,0,0.649776417447669,0,1.96622188184453,0,0,0,0.14084341977668,0,0,0,0,0,0,1.25602267690966,27.4474156666002,1.33597925158342,0.520455980298408,0.913396434936424,0.691846491768175,0.301445281105245,0.470354828542819,0.251333182659351,0.741584903203122,1.73519228303894,15.0383793831479,1.45590164952668,7.28777010919299,6.30337829075789,0,0.585561594023094,0.209446706813455,1.78819938646014,5.03223522924865,7.19883277192089,5.97230067243404,0.299581278809645,0.457500602818626,0.125654352112864,0.347648640384553,0,0.20778804455956,0.486723789203273,0.611036183101898,7.34001126599549,0.252722758433675,0.420883711772948,0.260240885925407,0,0.180062129805349,0.30140963567143,0,0.12811372028485,0.0937017245597288,0,0,0,0.351902248327898,0.657587197282725,0.278047249225598,0,0.61734640922383,0.398068533636986,8.42655824775882,7.97778512055617,6.53576048609863,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0.154267112887378,0.465067889500816,0,0.467061369468678,0.658239399653922,0.32833492815819,0.324275238183423,0.438599962275997,1.53685080703735,0.268412837520744,0.420579897128254,0.102904612379284,0.660837565967596,0,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.329397909448022,0,0.397912944082302,0.38992817423824,0.898819408654221,0.648414149624083,0.995706366271836,0.379335801906163,0.342745537829186,0,0.203651327845314,0.387904974335251,0.280543279561274,0.316182685621286,0.295220295959204,0.31399745568275,0.370191491765402,0.889357881261447,2.66952169145751,1.37591296579242,2.9232074610031,2.02860121388503,2.41177159752417,2.03700681425136,6.61701116136864,3.24270453550071,1.64736847912849,1.43768206527355,2.23284568601102,0.624075346229121,2.02063102357689,0.538192240565737,0.482443521363367,4.98833613449833,0.568474235311454,0.325929952884052,0.169745085775188,0.469380496577004,1.34005005953453,0.238043640886014,1.17080188714679,1.10344600874334,1.10732344824387,2.71073106717728,1.80249646187312,3.28101465545202,2.4590339958857,12.0633027151418,23.3879444042045,0.491764273019036,2.48343071674259,0.160550589987792,0.35163505977661,0,1.51482556322624,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.99358059645788,0.35613120733451,0,2.96946221350564,0,0.485561272309963,0.906970670894253,0.377210159511796,1.18120757152309,0.307435147943927,0,0.727067458955011,0.356497378384721,1.26414703174326,1.05418608574999,0,0.680879211507576,0.18006109403131,0.646793418913773,0.428674070063185,0.177340233642274,0.535106452806212,0.493647061806363,0,0.704015124191131,0.42366414172764,0,0.98931751764888,0.484393280087717,0.72375509913787,0.238744688006273,0.164140899745061,1.1659233465194,0.556275906031529,13.3279287022325,3.09580301944834,7.22258656741876,4.1441060541032,6.83471138605126,7.32090154260872,1.5298058699447,3.07893195112048,1.52019971184866,0,0.158167996790568,0.203319467126849,0.216010681643603,0.418176592028937,0.436725127492355,0.269728692769641,0.41326727862668,0.523511883968059,0.648074866458964,1.24267862617385,0.56369293868419,0.897099276263873,0.66183396182839,0.388902376688095,0.258319646955462,0.168956125490778,0.234714477291508,1.17183946359555,0.419437377702843,0.483168241652012,0,10.1123558601017,6.28448167399509,5.44368072973584,6.75588279484534,5.54982756569192,3.77494574084403,4.44723163223885,5.1691334511102,4.54349024766664,3.73413352609499,4.63800451629466,7.21188317474168,7.02346443974405,7.59699864180198,0.226730383615211,0.887943813496259,0.269141569828427,0,0.19318959403219,1.50145980360946,2.01466786693992,0.428736758158132,0.501572104035363,0.564751842617067,0,0.572895513439397,0.343706364687375,0,0,0,0.45032120322422,0.453142408984205,0,0.207574695168353,0.399024873401031,0.512200817262403,0.729320151204882,1.25767897576789,0.551530525350042,1.77797382241292,0.824140228955577,1.28367683836726,0.252697211763798,0.25347929989024,0.377252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| ||
|short_description=p4@Pik3cd | |||
}} | }} |
Latest revision as of 17:49, 26 September 2015
Short description: | p4@Pik3cd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pik3cd_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | -36bp_to_ENSMUST00000146612_5end |
EntrezGene: | Pik3cd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.75e-19 | 32 |
hematopoietic oligopotent progenitor cell | 2.75e-19 | 32 |
hematopoietic stem cell | 2.75e-19 | 32 |
hematopoietic multipotent progenitor cell | 2.75e-19 | 32 |
hematopoietic lineage restricted progenitor cell | 4.94e-16 | 25 |
connective tissue cell | 1.04e-13 | 46 |
mesenchymal cell | 1.04e-13 | 46 |
leukocyte | 1.40e-12 | 17 |
nongranular leukocyte | 1.40e-12 | 17 |
lymphoid lineage restricted progenitor cell | 5.56e-11 | 12 |
common myeloid progenitor | 1.24e-10 | 19 |
T cell | 4.04e-10 | 11 |
pro-T cell | 4.04e-10 | 11 |
motile cell | 6.17e-10 | 54 |
lymphocyte | 8.84e-10 | 13 |
common lymphoid progenitor | 8.84e-10 | 13 |
myeloid cell | 8.86e-09 | 16 |
mature alpha-beta T cell | 1.57e-08 | 9 |
alpha-beta T cell | 1.57e-08 | 9 |
immature T cell | 1.57e-08 | 9 |
mature T cell | 1.57e-08 | 9 |
immature alpha-beta T cell | 1.57e-08 | 9 |
CD4-positive, alpha-beta T cell | 1.50e-07 | 8 |