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FFCP PHASE1:Mm9::chr1:173319199..173319230,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:173319199..173319230,+
|DHSsupport=NA
|short_description=p3@Arhgap30
|DPIdataset=NA
|description=CAGE_peak_3_at_Arhgap30_5end
|association_with_transcript=108bp_to_ENSMUST00000111282,NM_001005508,uc007doh.2,uc007doi.2_5end
|EntrezGene=226652
|EntrezGene=226652
|HGNC=
|HGNC=
|MCL_coexpression_id=36
|TSSclassifier=NA
|UniProt=Q640N3,E9QMX7
|UniProt=Q640N3,E9QMX7
|association_with_transcript=108bp_to_ENSMUST00000111282,NM_001005508,uc007doh.2,uc007doi.2_5end
|cluster_id=chr1:173319199..173319230,+
|description=CAGE_peak_3_at_Arhgap30_5end
|id=chr1:173319199..173319230,+
|ontology_enrichment_celltype=CL:0000988!1.18e-10!32;CL:0002032!1.18e-10!32;CL:0000037!1.18e-10!32;CL:0000566!1.18e-10!32;CL:0000837!1.18e-10!32;CL:0002031!2.95e-08!25;CL:0000049!5.11e-07!19
|ontology_enrichment_celltype_v019_2=CL:0000988,4.36e-19,32;CL:0002032,4.36e-19,32;CL:0000037,4.36e-19,32;CL:0000837,4.36e-19,32;CL:0002320,1.76e-14,46;CL:0000134,1.76e-14,46;CL:0002031,2.25e-14,25;CL:0000049,1.25e-12,19;CL:0000219,6.66e-11,54;CL:0000738,1.38e-10,17;CL:0002087,1.38e-10,17;CL:0000763,6.15e-10,16;CL:0000838,1.94e-08,12;CL:0000542,1.45e-07,13;CL:0000051,1.45e-07,13;CL:0000557,1.93e-07,7;CL:0000084,2.07e-07,11;CL:0000827,2.07e-07,11;CL:0000839,2.77e-07,13;CL:0000553,2.84e-07,6;CL:0000556,2.84e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002193!7.74e-18!48;UBERON:0002390!3.09e-16!45;UBERON:0003061!3.09e-16!45;UBERON:0002405!8.01e-16!70;UBERON:0002371!1.91e-10!16;UBERON:0001474!6.60e-10!22;UBERON:0004765!6.60e-10!22;UBERON:0001434!6.60e-10!22;UBERON:0002204!2.04e-08!32;UBERON:0003081!2.85e-08!88;UBERON:0004177!1.60e-07!29;UBERON:0000926!2.72e-07!193;UBERON:0004120!2.72e-07!193;UBERON:0006603!2.72e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.90e-29,48;UBERON:0002405,1.90e-29,48;UBERON:0002390,9.62e-27,45;UBERON:0003061,9.62e-27,45;UBERON:0001474,5.70e-17,22;UBERON:0004765,5.70e-17,22;UBERON:0001434,5.70e-17,22;UBERON:0002371,1.95e-16,16;UBERON:0002384,1.76e-14,46;UBERON:0002204,3.09e-14,32;UBERON:0003081,1.52e-12,87;UBERON:0004177,5.22e-12,29;UBERON:0005057,5.22e-12,29;UBERON:0000926,4.74e-10,120;UBERON:0004120,4.74e-10,120;UBERON:0006603,4.74e-10,120;UBERON:0000077,1.24e-09,35;UBERON:0002370,6.76e-08,23;UBERON:0000974,6.76e-08,23;UBERON:0004807,6.76e-08,23;UBERON:0005058,6.76e-08,23;UBERON:0003351,6.76e-08,23;UBERON:0009113,6.76e-08,23;UBERON:0003295,6.76e-08,23;UBERON:0009722,6.76e-08,23;UBERON:0005562,6.76e-08,23;UBERON:0007690,6.76e-08,23;UBERON:0006562,2.21e-07,24;UBERON:0003408,2.21e-07,24;UBERON:0001557,2.21e-07,24;UBERON:0001042,2.21e-07,24;UBERON:0008814,2.21e-07,24;UBERON:0009145,2.21e-07,24
|phase1_expression=0,0,0,0,0,0,0,5.93967287831251,1.40788722151667,3.04283884218592,0.171217968225505,0.159544317990673,7.36163138704185,7.43073420561478,3.66420737997229,5.4668322195253,2.79824751251259,17.3504190947031,20.2929361736493,19.9463136345074,1.27564935226605,10.2269679736912,10.1867917764185,2.55987876469451,3.21172993494038,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,42.6902263351646,26.5654017138092,31.4114246384279,32.3527318417058,37.5675016727145,29.6161315349004,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,14.5970867270231,6.5282592781021,10.7550015725588,0.257259436035947,0.573066879877513,0,0,0,0,0,0,11.2487464660175,10.8775299882367,8.5257613793532,1.79760066311043,1.53687322128622,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0.638436690425939,0.307213066512487,0,0.182975287204819,0,0,0,0,0.294628585473668,0,0,0.227178579999552,0,0.289864488701678,0.860423876981386,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.1418387971906,9.83963957859253,0.593768556259299,0.173485326766136,0.304465478312141,0,0.452167921657868,0.117588707135705,0.376999773989026,0.247194967734374,0.578397427679647,6.19227386364912,1.45590164952668,3.3126227769059,2.90925151881133,0,0,0,0.766371165625774,7.18890747035522,5.99902730993408,5.46401976414178,0,0.457500602818626,0.251308704225729,0.521472960576829,0.255715457330331,0.41557608911912,0.324482526135515,0.407357455401265,3.98102305952298,0.505445516867349,0.841767423545896,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,7.02213187313235,5.40430604940902,8.24074148247219,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.486412857275134,0.292399974850665,1.3173006917463,0,0.210289948564127,0.102904612379284,1.32167513193519,0.528901133327089,0,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0,0.474529061544512,0,0.502670417600539,0.596869416123452,0.58489226135736,0.898819408654221,0,0.597423819763102,0,0.114248512609729,1.1270773567308,0.407302655690628,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,2.17059443777175,1.01850340712568,1.15078454980324,2.10775794807546,1.09824565275233,1.43768206527355,1.11642284300551,1.24815069245824,0.252578877947112,0.358794827043824,0.482443521363367,3.69506380333209,0.189491411770485,0,0,0.234690248288502,0.502518772325447,0.476087281772027,0.585400943573396,1.41871629695572,0.8858587585951,1.2756381492599,1.80249646187312,1.72684981865896,1.73578870297814,13.5712155545345,6.52686820582452,1.96705709207614,0.827810238914197,0,0.703270119553219,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.614870295887855,1.29214146584111,0.363533729477506,0,0.948110273807448,2.10837217149998,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0,0.220528398054962,1.15420377059036,0.484393280087717,0.422190474497091,0.358117032009409,0.492422699235184,0.874442509889552,0.18542530201051,6.83483523191411,1.44470807574256,2.96311243791539,2.63715839806567,3.96413260390973,4.11800711771741,3.56954702987096,3.35883485576779,4.83699908315483,0.954670618015114,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0,0.41326727862668,0.523511883968059,0.90730481304255,0,5.07323644815771,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0.966336483304024,1.44015003128933,3.47612232690996,1.41907650703115,0.821687657318618,1.55904987573354,1.25318686967237,1.98681354781265,1.9231271923195,1.32920574457119,2.22126189885925,2.362411006305,1.31074040677893,1.75424185331554,3.2712026157712,3.3894301632655,0.453460767230423,0,0,0,0.579568782096571,1.50145980360946,0.36630324853453,1.07184189539533,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0.551530525350042,0.222246727801615,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.655490552289177,0.512201219238954,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0.407412341537585,0,0.237270036248348,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0,0,0.859484216193193,0.956441660344217,0.441182838239031,1.15933917810211
|phase1_expression=0,0,0,0,0,0,0,5.93967287831251,1.40788722151667,3.04283884218592,0.171217968225505,0.159544317990673,7.36163138704185,7.43073420561478,3.66420737997229,5.4668322195253,2.79824751251259,17.3504190947031,20.2929361736493,19.9463136345074,1.27564935226605,10.2269679736912,10.1867917764185,2.55987876469451,3.21172993494038,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,42.6902263351646,26.5654017138092,31.4114246384279,32.3527318417058,37.5675016727145,29.6161315349004,0,0,0,0,0,0,0.194429899074283,0.139986421625363,0,14.5970867270231,6.5282592781021,10.7550015725588,0.257259436035947,0.573066879877513,0,0,0,0,0,0,11.2487464660175,10.8775299882367,8.5257613793532,1.79760066311043,1.53687322128622,0,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,0,0.638436690425939,0.307213066512487,0,0.182975287204819,0,0,0,0,0.294628585473668,0,0,0.227178579999552,0,0.289864488701678,0.860423876981386,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,1.1418387971906,9.83963957859253,0.593768556259299,0.173485326766136,0.304465478312141,0,0.452167921657868,0.117588707135705,0.376999773989026,0.247194967734374,0.578397427679647,6.19227386364912,1.45590164952668,3.3126227769059,2.90925151881133,0,0,0,0.766371165625774,7.18890747035522,5.99902730993408,5.46401976414178,0,0.457500602818626,0.251308704225729,0.521472960576829,0.255715457330331,0.41557608911912,0.324482526135515,0.407357455401265,3.98102305952298,0.505445516867349,0.841767423545896,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0,0,0,0.411564272815887,0.199034266818493,7.02213187313235,5.40430604940902,8.24074148247219,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.486412857275134,0.292399974850665,1.3173006917463,0,0.210289948564127,0.102904612379284,1.32167513193519,0.528901133327089,0,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0,0.474529061544512,0,0.502670417600539,0.596869416123452,0.58489226135736,0.898819408654221,0,0.597423819763102,0,0.114248512609729,1.1270773567308,0.407302655690628,0,0.140271639780637,0.0632365371242573,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,2.17059443777175,1.01850340712568,1.15078454980324,2.10775794807546,1.09824565275233,1.43768206527355,1.11642284300551,1.24815069245824,0.252578877947112,0.358794827043824,0.482443521363367,3.69506380333209,0.189491411770485,0,0,0.234690248288502,0.502518772325447,0.476087281772027,0.585400943573396,1.41871629695572,0.8858587585951,1.2756381492599,1.80249646187312,1.72684981865896,1.73578870297814,13.5712155545345,6.52686820582452,1.96705709207614,0.827810238914197,0,0.703270119553219,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0.614870295887855,1.29214146584111,0.363533729477506,0,0.948110273807448,2.10837217149998,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0,0.220528398054962,1.15420377059036,0.484393280087717,0.422190474497091,0.358117032009409,0.492422699235184,0.874442509889552,0.18542530201051,6.83483523191411,1.44470807574256,2.96311243791539,2.63715839806567,3.96413260390973,4.11800711771741,3.56954702987096,3.35883485576779,4.83699908315483,0.954670618015114,0,0,0.324016022465404,0.209088296014469,0.218362563746178,0,0.41326727862668,0.523511883968059,0.90730481304255,0,5.07323644815771,0.149516546043979,0,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0.966336483304024,1.44015003128933,3.47612232690996,1.41907650703115,0.821687657318618,1.55904987573354,1.25318686967237,1.98681354781265,1.9231271923195,1.32920574457119,2.22126189885925,2.362411006305,1.31074040677893,1.75424185331554,3.2712026157712,3.3894301632655,0.453460767230423,0,0,0,0.579568782096571,1.50145980360946,0.36630324853453,1.07184189539533,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0.551530525350042,0.222246727801615,0.412070114477788,0,0.252697211763798,0.50695859978048,0.188626341386076,0.655490552289177,0.512201219238954,0.402048282689293,0.476293691283074,0.347652977834566,0.192909220463705,0,0.147198920134397,0.342869252385415,0.177475806159338,0.715308569841963,0,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0.407412341537585,0,0.237270036248348,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0,0,0.859484216193193,0.956441660344217,0.441182838239031,1.15933917810211
|short_description=p3@Arhgap30
}}
}}

Latest revision as of 18:59, 26 September 2015

Short description:p3@Arhgap30
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Arhgap30_5end
Coexpression cluster:MCL_coexpression_mm9:36
Association with transcript: 108bp_to_ENSMUST00000111282, NM_001005508, uc007doh.2, uc007doi.2_5end
EntrezGene:Arhgap30
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Arhgap30

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.36
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.43
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.35
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A420.29
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.95
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G842.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H126.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H331.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G932.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H237.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H429.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A214.60
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.76
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D28.53
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H99.84
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G26.19
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.46
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D58.24
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.80
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G26.83
spleen, embryo E16.CNhs11035.461-43C11.44
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H13.96
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.84
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D32.36
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G73.27
thymus, neonate N30.CNhs11132.1393-42G23.39
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemolymphoid system1.90e-2948
immune system1.90e-2948
hematopoietic system9.62e-2745
blood island9.62e-2745
bone element5.70e-1722
skeletal element5.70e-1722
skeletal system5.70e-1722
bone marrow1.95e-1616
connective tissue1.76e-1446
musculoskeletal system3.09e-1432
lateral plate mesoderm1.52e-1287
hemopoietic organ5.22e-1229
immune organ5.22e-1229
mesoderm4.74e-10120
mesoderm-derived structure4.74e-10120
presumptive mesoderm4.74e-10120
mixed endoderm/mesoderm-derived structure1.24e-0935
thymus6.76e-0823
neck6.76e-0823
respiratory system epithelium6.76e-0823
hemolymphoid system gland6.76e-0823
pharyngeal epithelium6.76e-0823
thymic region6.76e-0823
pharyngeal gland6.76e-0823
entire pharyngeal arch endoderm6.76e-0823
thymus primordium6.76e-0823
early pharyngeal endoderm6.76e-0823
pharynx2.21e-0724
gland of gut2.21e-0724
upper respiratory tract2.21e-0724
chordate pharynx2.21e-0724
pharyngeal arch system2.21e-0724
pharyngeal region of foregut2.21e-0724
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