Personal tools

FFCP PHASE1:Mm9::chr12:88019823..88019836,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr12:88019823..88019836,+
|DHSsupport=NA
|short_description=p3@Vash1
|DPIdataset=NA
|description=CAGE_peak_3_at_Vash1_5end
|association_with_transcript=173bp_to_ENSMUST00000021681,NM_177354,uc007ohx.2_5end
|EntrezGene=238328
|EntrezGene=238328
|HGNC=
|HGNC=
|MCL_coexpression_id=2806
|TSSclassifier=NA
|UniProt=Q8C1W1,A0PCF8
|UniProt=Q8C1W1,A0PCF8
|association_with_transcript=173bp_to_ENSMUST00000021681,NM_177354,uc007ohx.2_5end
|cluster_id=chr12:88019823..88019836,+
|description=CAGE_peak_3_at_Vash1_5end
|id=chr12:88019823..88019836,+
|ontology_enrichment_celltype=CL:0000540!4.48e-14!33;CL:0000047!4.48e-14!33;CL:0000031!4.48e-14!33;CL:0000404!4.48e-14!33;CL:0000393!5.25e-11!39;CL:0000211!5.25e-11!39;CL:0002319!8.12e-11!43;CL:0000221!1.27e-10!44;CL:0000133!1.27e-10!44;CL:0000117!4.40e-09!23;CL:0000337!4.40e-09!23;CL:0000055!2.80e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.33e-20,33;CL:0000047,1.33e-20,33;CL:0000031,1.33e-20,33;CL:0000404,1.33e-20,33;CL:0000393,1.30e-16,39;CL:0000211,1.30e-16,39;CL:0002319,1.41e-14,43;CL:0000221,3.98e-14,44;CL:0000133,3.98e-14,44;CL:0000117,1.75e-12,23;CL:0000337,1.75e-12,23;CL:0000107,1.32e-10,9;CL:0002613,1.44e-07,3;CL:0000120,1.92e-07,3;CL:0002321,4.97e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.33e-18!102;UBERON:0000924!1.33e-18!102;UBERON:0006601!1.33e-18!102;UBERON:0000073!1.42e-17!75;UBERON:0001016!1.42e-17!75;UBERON:0001017!1.49e-17!73;UBERON:0005743!1.49e-17!73;UBERON:0002346!2.99e-16!71;UBERON:0003075!2.99e-16!71;UBERON:0007284!2.99e-16!71;UBERON:0003056!1.13e-12!49;UBERON:0000033!2.15e-12!63;UBERON:0001049!6.24e-11!52;UBERON:0005068!6.24e-11!52;UBERON:0006241!6.24e-11!52;UBERON:0007135!6.24e-11!52;UBERON:0002020!2.84e-09!34;UBERON:0000955!3.80e-09!50;UBERON:0006238!3.80e-09!50;UBERON:0002616!4.36e-09!49;UBERON:0003080!1.16e-08!40;UBERON:0002780!2.09e-08!39;UBERON:0001890!2.09e-08!39;UBERON:0006240!2.09e-08!39;UBERON:0000468!1.60e-07!333;UBERON:0002791!2.17e-07!29;UBERON:0003528!2.17e-07!29;UBERON:0001893!2.17e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.28e-17,95;UBERON:0000924,2.28e-17,95;UBERON:0006601,2.28e-17,95;UBERON:0000970,3.66e-14,9;UBERON:0000019,3.66e-14,9;UBERON:0000047,3.66e-14,9;UBERON:0010312,3.66e-14,9;UBERON:0004088,3.66e-14,9;UBERON:0002104,3.66e-14,9;UBERON:0001456,3.66e-14,9;UBERON:0003072,3.66e-14,9;UBERON:0004128,3.66e-14,9;UBERON:0003071,3.66e-14,9;UBERON:0002346,6.71e-14,64;UBERON:0003075,6.71e-14,64;UBERON:0007284,6.71e-14,64;UBERON:0001017,1.46e-12,73;UBERON:0001016,4.71e-12,75;UBERON:0003056,8.11e-12,49;UBERON:0010371,2.10e-11,73;UBERON:0001444,2.70e-11,11;UBERON:0002410,1.32e-10,9;UBERON:0000020,3.20e-10,12;UBERON:0001032,3.20e-10,12;UBERON:0004456,3.20e-10,12;UBERON:0000033,2.58e-09,13;UBERON:0005085,2.58e-09,13;UBERON:0010314,1.20e-08,92;UBERON:0000010,1.85e-08,11;UBERON:0002020,1.98e-08,34;UBERON:0000369,3.09e-07,5;UBERON:0002435,3.09e-07,5;UBERON:0000204,3.09e-07,5;UBERON:0010082,3.09e-07,5;UBERON:0000013,3.73e-07,3
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.55994568650145,0,0,0,0,0,0.286533439938757,0.515672092277442,4.45096213891115,1.5869729378161,5.07065122804943,0,0,0,0,0,0,0.768436610643109,1.03689612308478,1.4850653216486,0.630974884054146,1.14260393761521,0.441737081903227,0.979926393719632,0.766763768145891,1.83843757322004,1.10115880999389,0.255374676170375,0.153606533256243,3.29715719325485,3.11057988248193,3.64639359389732,0.558365998002762,0,0.15279824777681,2.06240009831567,0.427115042397309,2.42319279572891,0.075726193333184,0.529000920747499,0.579728977403356,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0.304465478312141,0.691846491768175,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0.808834249737046,0.441683036920787,0,0,0,0.628340120440365,0,0,0,0,0.599162557619291,0,1.38219787324151,1.56441888173049,1.02286182932132,0.20778804455956,0.324482526135515,0.611036183101898,0,0,0,1.17108398666433,3.90833577536904,4.86167750474443,2.26057226753573,3.6739709541717,2.94661556655154,2.43624483855295,1.03481348295606,0.431135985865684,0.378212160335639,0,0.219195732427575,0.278047249225598,1.0447564995665,0.411564272815887,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.925602677324269,0,0.268273401399619,1.40118410840603,0,0.820837320395476,0.810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0.420579897128254,0.823236899034275,0.330418782983798,0,0,0.232236671860439,0.515469845288373,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0,0,0.482443521363367,0,0.189491411770485,0,0.339490171550376,0,0,0.238043640886014,0.585400943573396,0.788175720530955,0,0.159454768657487,0.163863314715738,0,0.433947175744535,0,0,0,0.275936746304732,0.963303539926752,0.820481806145422,0,0.504941854408746,0.631016438832513,1.95219372148319,1.72338718186239,0.716906393857656,1.78238939265915,1.41538265394416,2.02405350837447,2.33804686329049,2.37172666767914,0.321321316421807,0.141940085208269,0.35613120733451,0.81443479676788,0,0,0.242780636154981,0,0.565815239267694,1.18120757152309,0,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,0,1.08036656418786,0.776152102696527,0.643011105094777,0.709360934569094,0.535106452806212,0.329098041204242,0.304464949114599,0.469343416127421,0,0,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0.741701208042039,0.170870880797853,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.158167996790568,0.406638934253697,0,0.627264888043406,0.87345025498471,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.938857909166032,0.13020438484395,0.524296722128554,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0,0.214368379079066,0,1.6942555278512,0.920650473014354,0,1.3748254587495,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,1.03787347584177,1.59609949360412,1.53660245178721,0.486213434136588,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0,1.01391719956096,0.754505365544305,0.842773567228942,0.640251524048693,0.861532034334199,0.952587382566147,0.463537303779422,0.578727661391115,0,0.294397840268795,0.342869252385415,0.887379030796687,0.238436189947321,0.872078499793971,0.564656282491984,0.507687647350059,0.548783918618318,0,0.407412341537585,0.561142271657738,0.949080144993393,0.591026894253381,0.409231043169689,1.23949472948773,1.15743966588685,1.49886346762768,1.16965804222704,0.859484216193193,0.765153328275374,0.661774257358546,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0.55994568650145,0,0,0,0,0,0.286533439938757,0.515672092277442,4.45096213891115,1.5869729378161,5.07065122804943,0,0,0,0,0,0,0.768436610643109,1.03689612308478,1.4850653216486,0.630974884054146,1.14260393761521,0.441737081903227,0.979926393719632,0.766763768145891,1.83843757322004,1.10115880999389,0.255374676170375,0.153606533256243,3.29715719325485,3.11057988248193,3.64639359389732,0.558365998002762,0,0.15279824777681,2.06240009831567,0.427115042397309,2.42319279572891,0.075726193333184,0.529000920747499,0.579728977403356,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.520455980298408,0.304465478312141,0.691846491768175,0.150722640552623,0.117588707135705,0.251333182659351,0,0,0,0.808834249737046,0.441683036920787,0,0,0,0.628340120440365,0,0,0,0,0.599162557619291,0,1.38219787324151,1.56441888173049,1.02286182932132,0.20778804455956,0.324482526135515,0.611036183101898,0,0,0,1.17108398666433,3.90833577536904,4.86167750474443,2.26057226753573,3.6739709541717,2.94661556655154,2.43624483855295,1.03481348295606,0.431135985865684,0.378212160335639,0,0.219195732427575,0.278047249225598,1.0447564995665,0.411564272815887,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0.473489471170421,0.196764231747404,0.925602677324269,0,0.268273401399619,1.40118410840603,0,0.820837320395476,0.810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0.420579897128254,0.823236899034275,0.330418782983798,0,0,0.232236671860439,0.515469845288373,0.403367049246685,0.22237804384487,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0,0.312037673114561,0,0,0.482443521363367,0,0.189491411770485,0,0.339490171550376,0,0,0.238043640886014,0.585400943573396,0.788175720530955,0,0.159454768657487,0.163863314715738,0,0.433947175744535,0,0,0,0.275936746304732,0.963303539926752,0.820481806145422,0,0.504941854408746,0.631016438832513,1.95219372148319,1.72338718186239,0.716906393857656,1.78238939265915,1.41538265394416,2.02405350837447,2.33804686329049,2.37172666767914,0.321321316421807,0.141940085208269,0.35613120733451,0.81443479676788,0,0,0.242780636154981,0,0.565815239267694,1.18120757152309,0,0.516856586336442,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,0,1.08036656418786,0.776152102696527,0.643011105094777,0.709360934569094,0.535106452806212,0.329098041204242,0.304464949114599,0.469343416127421,0,0,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0.741701208042039,0.170870880797853,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0.158167996790568,0.406638934253697,0,0.627264888043406,0.87345025498471,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.938857909166032,0.13020438484395,0.524296722128554,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0,0.214368379079066,0,1.6942555278512,0.920650473014354,0,1.3748254587495,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,1.03787347584177,1.59609949360412,1.53660245178721,0.486213434136588,0.419226325255965,0.183843508450014,0.44449345560323,0.206035057238894,0.64183841918363,0,1.01391719956096,0.754505365544305,0.842773567228942,0.640251524048693,0.861532034334199,0.952587382566147,0.463537303779422,0.578727661391115,0,0.294397840268795,0.342869252385415,0.887379030796687,0.238436189947321,0.872078499793971,0.564656282491984,0.507687647350059,0.548783918618318,0,0.407412341537585,0.561142271657738,0.949080144993393,0.591026894253381,0.409231043169689,1.23949472948773,1.15743966588685,1.49886346762768,1.16965804222704,0.859484216193193,0.765153328275374,0.661774257358546,0.231867835620421
|short_description=p3@Vash1
}}
}}

Latest revision as of 23:13, 26 September 2015

Short description:p3@Vash1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Vash1_5end
Coexpression cluster:MCL_coexpression_mm9:2806
Association with transcript: 173bp_to_ENSMUST00000021681, NM_177354, uc007ohx.2_5end
EntrezGene:Vash1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Vash1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E23.91
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C63.67
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.28e-1795
ectoderm2.28e-1795
presumptive ectoderm2.28e-1795
eye3.66e-149
camera-type eye3.66e-149
simple eye3.66e-149
immature eye3.66e-149
ocular region3.66e-149
visual system3.66e-149
face3.66e-149
optic cup3.66e-149
optic vesicle3.66e-149
eye primordium3.66e-149
neurectoderm6.71e-1464
neural plate6.71e-1464
presumptive neural plate6.71e-1464
central nervous system1.46e-1273
nervous system4.71e-1275
pre-chordal neural plate8.11e-1249
ecto-epithelium2.10e-1173
subdivision of head2.70e-1111
autonomic nervous system1.32e-109
sense organ3.20e-1012
sensory system3.20e-1012
entire sense organ system3.20e-1012
head2.58e-0913
ectodermal placode2.58e-0913
structure with developmental contribution from neural crest1.20e-0892
peripheral nervous system1.85e-0811
gray matter1.98e-0834
corpus striatum3.09e-075
striatum3.09e-075
ventral part of telencephalon3.09e-075
future corpus striatum3.09e-075
sympathetic nervous system3.73e-073
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr12:88019823..88019836,%2B&oldid=4279580"