Personal tools

FFCP PHASE1:Mm9::chr11:116196664..116196679,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:116196664..116196679,-
|DHSsupport=NA
|short_description=p1@Foxj1
|DPIdataset=NA
|description=CAGE_peak_1_at_Foxj1_5end
|association_with_transcript=0bp_to_NM_008240,uc007mkv.2_5end
|EntrezGene=15223
|EntrezGene=15223
|HGNC=
|HGNC=
|MCL_coexpression_id=204
|TSSclassifier=NA
|UniProt=Q61660,Q640Q8
|UniProt=Q61660,Q640Q8
|association_with_transcript=0bp_to_NM_008240,uc007mkv.2_5end
|cluster_id=chr11:116196664..116196679,-
|description=CAGE_peak_1_at_Foxj1_5end
|id=chr11:116196664..116196679,-
|ontology_enrichment_celltype=CL:0000117!2.30e-08!23;CL:0000337!2.30e-08!23;CL:0000221!9.16e-08!44;CL:0000133!9.16e-08!44;CL:0002319!1.81e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.49e-08,23;CL:0000337,1.49e-08,23;CL:0000221,1.31e-07,44;CL:0000133,1.31e-07,44;CL:0002319,2.82e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.58e-12!73;UBERON:0005743!7.58e-12!73;UBERON:0000073!1.96e-11!75;UBERON:0001016!1.96e-11!75;UBERON:0001049!1.09e-10!52;UBERON:0005068!1.09e-10!52;UBERON:0006241!1.09e-10!52;UBERON:0007135!1.09e-10!52;UBERON:0000955!3.52e-09!50;UBERON:0006238!3.52e-09!50;UBERON:0002616!4.50e-09!49;UBERON:0005178!1.73e-08!17;UBERON:0005181!1.73e-08!17;UBERON:0002224!1.73e-08!17;UBERON:0000915!1.73e-08!17;UBERON:0008947!1.73e-08!17;UBERON:0003258!1.73e-08!17;UBERON:0000033!4.78e-08!63;UBERON:0002048!2.37e-07!14;UBERON:0000117!2.37e-07!14;UBERON:0000171!2.37e-07!14;UBERON:0000170!2.37e-07!14;UBERON:0005597!2.37e-07!14;UBERON:0000118!2.37e-07!14;UBERON:0004121!6.67e-07!102;UBERON:0000924!6.67e-07!102;UBERON:0006601!6.67e-07!102
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.74e-11,73;UBERON:0001016,1.09e-10,75;UBERON:0000073,2.90e-10,54;UBERON:0001049,1.05e-09,52;UBERON:0005068,1.05e-09,52;UBERON:0006241,1.05e-09,52;UBERON:0007135,1.05e-09,52;UBERON:0005178,7.70e-09,17;UBERON:0005181,7.70e-09,17;UBERON:0002224,7.70e-09,17;UBERON:0000915,7.70e-09,17;UBERON:0008947,7.70e-09,17;UBERON:0003258,7.70e-09,17;UBERON:0004121,5.04e-08,95;UBERON:0000924,5.04e-08,95;UBERON:0006601,5.04e-08,95;UBERON:0002346,1.45e-07,64;UBERON:0003075,1.45e-07,64;UBERON:0007284,1.45e-07,64;UBERON:0002048,1.73e-07,14;UBERON:0000117,1.73e-07,14;UBERON:0000171,1.73e-07,14;UBERON:0000170,1.73e-07,14;UBERON:0005597,1.73e-07,14;UBERON:0000118,1.73e-07,14;UBERON:0000955,3.44e-07,47;UBERON:0006238,3.44e-07,47;UBERON:0002616,4.59e-07,46
|phase1_expression=11.2104192973356,0,0.454999239389536,0,0,0,0.233612640595526,0.129123323441576,0.422366166455,1.17032263160997,0,0,0,0,0,0,0,0,0,0,16.2432684188543,0,0,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,1.22501613757421,0,0,0,1.17646297606203,0,0,0,0,0,0.782391344348039,229.58048966861,214.19402816611,161.376816231655,112.549082986791,260.192141500599,0.167782606057736,0.725362142011344,0.672187598284928,0,0,0,10.7227724255587,11.1088105647127,10.775133859605,10.5041804941431,10.6715375533337,0,2.96659908770092,0,275.032901455896,1158.80240884981,0.725827286159344,0.810035629990144,1.68259969081106,17.9960120174396,8.61387309711293,3.1847607795888,3.54628242767475,3.67687514644008,3.30347642998166,7.78892762319645,7.68032666281217,12.0016521834476,14.729510619988,6.77187381723788,6.42120897703176,7.87867654044352,10.2374826010463,8.83885756421003,13.0981946335175,7.45597783301202,0.151452386666368,0.453429360640713,19.7107852317141,0,0,0,0,0,4.21333260395256,0,0,0,6.90132756905734,0,0,0,8.65964164044856,7.85415582972806,7.58286667522175,2.51204535381932,0,0,0.693941307064543,0,0,0,0,0.125666591329675,3.95511948374998,0,0,0,0.220841518460394,0,0,7.31951992528868,6.28340120440365,0,0,0,0.127070227073065,11.5338792341713,7.32000964509802,12.062817802835,1.21677024134594,2.55715457330331,14.3373750746096,9.08551073179443,4.27725328171328,6.09594155989456,6.57079171927554,0,0.260240885925407,0,1.26043490863744,1.50704817835715,2.51735046859913,1.92170580427275,1.59292931751539,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0,1.39323986772945,0,0,0,0,0,0,0,0,0.771335564436891,0.465067889500816,1.87791380979733,0.233530684734339,0,0,0,0,0,0,9.67333763394985,34.2672359223017,0,0,0.639864751605702,0,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,1.32767530667157,0.456994050438915,3.38123207019241,0.610953983535943,1.16371492300575,0.911765658574141,2.15004226222475,0.442830443938806,0,0,0,1.00107063429656,0.589676985339609,0.899448449539415,0.405720242777006,0.241177159752417,1.78238096246994,2.30156909960649,0,0,0,0,0,0.252578877947112,0.896987067609561,0.482443521363367,74.0860292568085,0.189491411770485,0.977789858652155,4.2436271443797,16.6630076284836,35.5113265776649,49.0369900225188,50.3444811473121,16.0787846988315,15.9454576547118,27.5856749777453,22.9408640602033,32.1194066270566,38.9105967584266,0,0,0.491764273019036,0,8.50918126935297,8.32202974804643,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,1.92792789853084,43.5756061589385,1.78065603667255,1.95464351224291,72.9167943538607,3.98235415019888,0.485561272309963,0.604647113929502,0.377210159511796,1.47650946440386,1.22974059177571,0.516856586336442,1.45413491791002,1.42598951353889,1.58018378967908,1.05418608574999,6.18813259489121,2.04263763452273,0.900305470156551,2.45781499187234,3.21505552547388,5.32020700926821,4.8159580752559,5.59466670047211,4.56697423671899,0.23467170806371,0,0,0.16488625294148,0,0.180938774784468,0.238744688006273,1.14898629821543,0,8.90041449650446,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,24.8024893021044,0.149516546043979,0.330916980914195,0.583353565032143,0,0,0.58678619322877,2.73429208172295,1.04859344425711,2.89900944991207,23.3304305068871,0.316011120628178,1.21635129174099,0.513554785824136,1.55904987573354,2.50637373934474,2.18549490259391,1.56254084375959,0.886137163047463,1.71642964911851,0.762068066549998,0.504130925684203,1.16949456887703,0.577271049841977,0.935015217452552,0,0,0.0897138566094757,0.335769232728157,0.579568782096571,1.50145980360946,8.42497471629419,1.2862102744744,0,0,0.460325236507177,1.14579102687879,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.453142408984205,1.55328093525546,1.45302286617847,1.99512436700516,2.90247129782028,6.07766792670735,5.8691685535835,9.19217542250071,4.88942801163553,6.59312183164461,6.73930340142812,9.09709962349671,6.33698249725599,6.97917463128482,6.18033949301224,6.91471645972588,7.75378830900779,8.57328644309533,7.18482820858104,7.33055037762079,9.06588981767275,9.27353196846703,3.42869252385415,8.16388708332953,5.00715998889374,6.68593516508711,5.36423468367385,4.99226186560891,6.21955107767427,5.78753365163254,4.75314398460516,5.05028044491965,9.13489639556141,7.09232273104057,9.41231399290286,6.04253680625267,5.40138510747196,19.2354145012218,4.91256377735358,4.94203424311086,0.765153328275374,0.441182838239031,0.463735671240843
|phase1_expression=11.2104192973356,0,0.454999239389536,0,0,0,0.233612640595526,0.129123323441576,0.422366166455,1.17032263160997,0,0,0,0,0,0,0,0,0,0,16.2432684188543,0,0,0,0,0.57423196411502,0.430761996159075,0.215471232685889,0,0,0,0,0,0,0.288851619751275,0,1.22501613757421,0,0,0,1.17646297606203,0,0,0,0,0,0.782391344348039,229.58048966861,214.19402816611,161.376816231655,112.549082986791,260.192141500599,0.167782606057736,0.725362142011344,0.672187598284928,0,0,0,10.7227724255587,11.1088105647127,10.775133859605,10.5041804941431,10.6715375533337,0,2.96659908770092,0,275.032901455896,1158.80240884981,0.725827286159344,0.810035629990144,1.68259969081106,17.9960120174396,8.61387309711293,3.1847607795888,3.54628242767475,3.67687514644008,3.30347642998166,7.78892762319645,7.68032666281217,12.0016521834476,14.729510619988,6.77187381723788,6.42120897703176,7.87867654044352,10.2374826010463,8.83885756421003,13.0981946335175,7.45597783301202,0.151452386666368,0.453429360640713,19.7107852317141,0,0,0,0,0,4.21333260395256,0,0,0,6.90132756905734,0,0,0,8.65964164044856,7.85415582972806,7.58286667522175,2.51204535381932,0,0,0.693941307064543,0,0,0,0,0.125666591329675,3.95511948374998,0,0,0,0.220841518460394,0,0,7.31951992528868,6.28340120440365,0,0,0,0.127070227073065,11.5338792341713,7.32000964509802,12.062817802835,1.21677024134594,2.55715457330331,14.3373750746096,9.08551073179443,4.27725328171328,6.09594155989456,6.57079171927554,0,0.260240885925407,0,1.26043490863744,1.50704817835715,2.51735046859913,1.92170580427275,1.59292931751539,0.776110112217047,0,0.189106080167819,0,0.219195732427575,0,0,0,1.39323986772945,0,0,0,0,0,0,0,0,0.771335564436891,0.465067889500816,1.87791380979733,0.233530684734339,0,0,0,0,0,0,9.67333763394985,34.2672359223017,0,0,0.639864751605702,0,0.128867461322093,0,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,1.32767530667157,0.456994050438915,3.38123207019241,0.610953983535943,1.16371492300575,0.911765658574141,2.15004226222475,0.442830443938806,0,0,0,1.00107063429656,0.589676985339609,0.899448449539415,0.405720242777006,0.241177159752417,1.78238096246994,2.30156909960649,0,0,0,0,0,0.252578877947112,0.896987067609561,0.482443521363367,74.0860292568085,0.189491411770485,0.977789858652155,4.2436271443797,16.6630076284836,35.5113265776649,49.0369900225188,50.3444811473121,16.0787846988315,15.9454576547118,27.5856749777453,22.9408640602033,32.1194066270566,38.9105967584266,0,0,0.491764273019036,0,8.50918126935297,8.32202974804643,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.790575555893047,1.92792789853084,43.5756061589385,1.78065603667255,1.95464351224291,72.9167943538607,3.98235415019888,0.485561272309963,0.604647113929502,0.377210159511796,1.47650946440386,1.22974059177571,0.516856586336442,1.45413491791002,1.42598951353889,1.58018378967908,1.05418608574999,6.18813259489121,2.04263763452273,0.900305470156551,2.45781499187234,3.21505552547388,5.32020700926821,4.8159580752559,5.59466670047211,4.56697423671899,0.23467170806371,0,0,0.16488625294148,0,0.180938774784468,0.238744688006273,1.14898629821543,0,8.90041449650446,0,0,0,0,0,0,0,0.279902904647316,0.138199973804424,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0.418176592028937,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,24.8024893021044,0.149516546043979,0.330916980914195,0.583353565032143,0,0,0.58678619322877,2.73429208172295,1.04859344425711,2.89900944991207,23.3304305068871,0.316011120628178,1.21635129174099,0.513554785824136,1.55904987573354,2.50637373934474,2.18549490259391,1.56254084375959,0.886137163047463,1.71642964911851,0.762068066549998,0.504130925684203,1.16949456887703,0.577271049841977,0.935015217452552,0,0,0.0897138566094757,0.335769232728157,0.579568782096571,1.50145980360946,8.42497471629419,1.2862102744744,0,0,0.460325236507177,1.14579102687879,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0.453142408984205,1.55328093525546,1.45302286617847,1.99512436700516,2.90247129782028,6.07766792670735,5.8691685535835,9.19217542250071,4.88942801163553,6.59312183164461,6.73930340142812,9.09709962349671,6.33698249725599,6.97917463128482,6.18033949301224,6.91471645972588,7.75378830900779,8.57328644309533,7.18482820858104,7.33055037762079,9.06588981767275,9.27353196846703,3.42869252385415,8.16388708332953,5.00715998889374,6.68593516508711,5.36423468367385,4.99226186560891,6.21955107767427,5.78753365163254,4.75314398460516,5.05028044491965,9.13489639556141,7.09232273104057,9.41231399290286,6.04253680625267,5.40138510747196,19.2354145012218,4.91256377735358,4.94203424311086,0.765153328275374,0.441182838239031,0.463735671240843
|short_description=p1@Foxj1
}}
}}

Latest revision as of 00:12, 27 September 2015

Short description:p1@Foxj1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Foxj1_5end
Coexpression cluster:MCL_coexpression_mm9:204
Association with transcript: 0bp_to_NM_008240, uc007mkv.2_5end
EntrezGene:Foxj1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Foxj1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2229.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8214.19
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3161.38
Mouse Astrocytes, donor2.CNhs12078.11552-120C4112.55
Mouse Astrocytes, donor3.CNhs12107.11633-122C4260.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E311.11
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.50
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C8275.03
Mouse Microglia, donor2.CNhs12634.11736-123E81158.80
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F118.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.61
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.73
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.42
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.24
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.71
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B27.32
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F112.06
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F214.34
diencephalon, neonate N30.CNhs11201.1388-42B29.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.10
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E71.92
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G134.27
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D52.15
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.78
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B174.09
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B616.66
lung, embryo E17.CNhs10605.480-44A635.51
lung, embryo E18.CNhs10583.1287-20I649.04
lung, neonate N00.CNhs11224.640-42C650.34
lung, neonate N06.CNhs11212.683-20E516.08
lung, neonate N07.CNhs11111.715-19A315.95
lung, neonate N10.CNhs11219.750-23E627.59
lung, neonate N20.CNhs11109.822-18A422.94
lung, neonate N25.CNhs11119.1359-25C732.12
lung, neonate N30.CNhs11133.1394-42H238.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.51
medulla oblongata, neonate N30.CNhs11200.1396-42A38.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I743.58
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G672.92
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.90
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G524.80
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E223.33
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.56
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E58.42
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B15.87
whole body, embryo E16.CNhs10514.453-14F29.19
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.69
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.04
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I519.24
whole body, embryo E18.CNhs10516.493-3B34.91
whole body, neonate N00.CNhs10525.657-19C24.94
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.49e-0823
neuroblast (sensu Vertebrata)1.49e-0823
ectodermal cell1.31e-0744
neurectodermal cell1.31e-0744
neural cell2.82e-0743

Uber anatomy
Ontology termp-valuen
central nervous system1.74e-1173
nervous system1.09e-1075
regional part of nervous system2.90e-1054
neural tube1.05e-0952
neural rod1.05e-0952
future spinal cord1.05e-0952
neural keel1.05e-0952
thoracic cavity element7.70e-0917
thoracic segment organ7.70e-0917
thoracic cavity7.70e-0917
thoracic segment of trunk7.70e-0917
respiratory primordium7.70e-0917
endoderm of foregut7.70e-0917
ectoderm-derived structure5.04e-0895
ectoderm5.04e-0895
presumptive ectoderm5.04e-0895
neurectoderm1.45e-0764
neural plate1.45e-0764
presumptive neural plate1.45e-0764
lung1.73e-0714
respiratory tube1.73e-0714
respiration organ1.73e-0714
pair of lungs1.73e-0714
lung primordium1.73e-0714
lung bud1.73e-0714
brain3.44e-0747
future brain3.44e-0747
regional part of brain4.59e-0746
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:116196664..116196679,-&oldid=4281993"