FFCP PHASE1:Mm9::chr8:108939219..108939296,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:108939219..108939296,+
|short_description=p1@Zfp90
|description=CAGE_peak_1_at_Zfp90_5end
|association_with_transcript=0bp_to_ENSMUST00000034382,NM_011764,...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22751 | |EntrezGene=22751 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=321 | |||
|TSSclassifier=NA | |||
|UniProt=Q61967 | |UniProt=Q61967 | ||
|association_with_transcript=0bp_to_ENSMUST00000034382,NM_011764,uc009ngc.1,uc009ngd.1,uc009nge.1_5end | |||
|cluster_id=chr8:108939219..108939296,+ | |||
|description=CAGE_peak_1_at_Zfp90_5end | |||
|id=chr8:108939219..108939296,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.54e-10!33;CL:0000047!1.54e-10!33;CL:0000031!1.54e-10!33;CL:0000404!1.54e-10!33;CL:0000117!1.38e-09!23;CL:0000337!1.38e-09!23;CL:0000393!3.72e-08!39;CL:0000211!3.72e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.54e-10,33;CL:0000047,1.54e-10,33;CL:0000031,1.54e-10,33;CL:0000404,1.54e-10,33;CL:0000117,1.38e-09,23;CL:0000337,1.38e-09,23;CL:0000393,3.72e-08,39;CL:0000211,3.72e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.96e-10!71;UBERON:0003075!2.96e-10!71;UBERON:0007284!2.96e-10!71;UBERON:0004121!4.62e-10!102;UBERON:0000924!4.62e-10!102;UBERON:0006601!4.62e-10!102;UBERON:0003056!3.81e-09!49;UBERON:0001017!5.75e-09!73;UBERON:0005743!5.75e-09!73;UBERON:0000468!6.41e-09!333;UBERON:0000033!9.28e-09!63;UBERON:0000073!2.56e-08!75;UBERON:0001016!2.56e-08!75;UBERON:0001049!1.20e-07!52;UBERON:0005068!1.20e-07!52;UBERON:0006241!1.20e-07!52;UBERON:0007135!1.20e-07!52;UBERON:0000153!1.65e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.32e-10,64;UBERON:0003075,1.32e-10,64;UBERON:0007284,1.32e-10,64;UBERON:0010371,2.34e-10,73;UBERON:0004121,3.82e-10,95;UBERON:0000924,3.82e-10,95;UBERON:0006601,3.82e-10,95;UBERON:0003056,3.81e-09,49;UBERON:0010314,4.54e-09,92;UBERON:0001017,5.74e-09,73;UBERON:0001016,2.56e-08,75;UBERON:0001049,1.20e-07,52;UBERON:0005068,1.20e-07,52;UBERON:0006241,1.20e-07,52;UBERON:0007135,1.20e-07,52;UBERON:0000073,1.61e-07,54;UBERON:0000922,5.96e-07,320 | |||
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| ||
|short_description=p1@Zfp90 | |||
}} | }} |
Latest revision as of 08:43, 27 September 2015
Short description: | p1@Zfp90 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp90_5end |
Coexpression cluster: | MCL_coexpression_mm9:321 |
Association with transcript: | 0bp_to_ENSMUST00000034382, NM_011764, uc009ngc.1, uc009ngd.1, uc009nge.1_5end |
EntrezGene: | Zfp90 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.54e-10 | 33 |
neuronal stem cell | 1.54e-10 | 33 |
neuroblast | 1.54e-10 | 33 |
electrically signaling cell | 1.54e-10 | 33 |
CNS neuron (sensu Vertebrata) | 1.38e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.38e-09 | 23 |
electrically responsive cell | 3.72e-08 | 39 |
electrically active cell | 3.72e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.32e-10 | 64 |
neural plate | 1.32e-10 | 64 |
presumptive neural plate | 1.32e-10 | 64 |
ecto-epithelium | 2.34e-10 | 73 |
ectoderm-derived structure | 3.82e-10 | 95 |
ectoderm | 3.82e-10 | 95 |
presumptive ectoderm | 3.82e-10 | 95 |
pre-chordal neural plate | 3.81e-09 | 49 |
structure with developmental contribution from neural crest | 4.54e-09 | 92 |
central nervous system | 5.74e-09 | 73 |
nervous system | 2.56e-08 | 75 |
neural tube | 1.20e-07 | 52 |
neural rod | 1.20e-07 | 52 |
future spinal cord | 1.20e-07 | 52 |
neural keel | 1.20e-07 | 52 |
regional part of nervous system | 1.61e-07 | 54 |
embryo | 5.96e-07 | 320 |