FFCP PHASE1:Mm9::chrX:159339158..159339193,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chrX:159339158..159339193,+ to FFCP PHASE1:Mm9::chrX:159339158..159339193,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=55936 | |EntrezGene=55936 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=P70303 | |UniProt=P70303 | ||
|association_with_transcript=0bp_to_ENSMUST00000101095,ENSMUST00000123089,ENSMUST00000148949_5end | |||
|cluster_id=chrX:159339158..159339193,+ | |||
|description=CAGE_peak_5_at_Ctps2_5end | |||
|id=chrX:159339158..159339193,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,6.14e-11,3;CL:0000359,6.14e-11,3;CL:0002539,6.14e-11,3;CL:0000514,6.14e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!4.16e-10!18;UBERON:0005564!4.16e-10!18;UBERON:0004176!2.01e-09!17;UBERON:0009196!2.01e-09!17;UBERON:0009117!2.01e-09!17;UBERON:0003133!3.95e-08!24;UBERON:0000473!4.21e-08!14;UBERON:0005156!1.69e-07!26;UBERON:0000990!1.69e-07!26;UBERON:0003135!4.52e-07!15;UBERON:0002323!7.36e-07!37;UBERON:0004458!7.36e-07!37;UBERON:0002553!7.71e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.60e-18,18;UBERON:0005564,1.60e-18,18;UBERON:0004176,6.12e-16,17;UBERON:0009196,6.12e-16,17;UBERON:0009117,6.12e-16,17;UBERON:0000473,1.61e-15,14;UBERON:0002553,2.74e-15,39;UBERON:0003135,2.10e-14,15;UBERON:0002323,5.91e-14,37;UBERON:0004458,5.91e-14,37;UBERON:0000947,8.72e-14,4;UBERON:0001637,8.72e-14,4;UBERON:0004573,8.72e-14,4;UBERON:0003509,8.72e-14,4;UBERON:0004571,8.72e-14,4;UBERON:0010191,8.72e-14,4;UBERON:0004572,8.72e-14,4;UBERON:0003886,1.60e-13,38;UBERON:0003133,1.90e-13,24;UBERON:0003101,1.99e-13,16;UBERON:0000079,1.99e-13,16;UBERON:0005156,2.83e-12,26;UBERON:0000990,2.83e-12,26;UBERON:0000055,4.66e-11,5;UBERON:0007500,4.66e-11,5;UBERON:0001981,4.66e-11,5;UBERON:0002049,4.66e-11,5;UBERON:0007798,4.66e-11,5;UBERON:0004537,4.66e-11,5;UBERON:0006965,4.66e-11,5;UBERON:0001135,6.14e-11,3;UBERON:0004237,6.14e-11,3;UBERON:0004695,6.14e-11,3;UBERON:0002111,6.14e-11,3;UBERON:0004178,6.14e-11,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.866554859253824,0,0.204169356262369,0,0,0.523523743973798,0,0,0,1.76255545165808,1.01376931219515,2.20256102594018,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0,0,0.441737081903227,0,0.0958454710182364,0,0,0.255374676170375,0.46081959976873,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.45839474333043,0,0.142371680799103,0,0,0.151143120213571,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,1.1930122580464,2.59786004602869,1.06001872353102,0.14084341977668,1.28326477414318,0,0,0,0,0,0,0,0.445326417194474,0.520455980298408,0,0.230615497256059,0.301445281105245,0.705532242814229,0.628332956648377,0.247194967734374,1.15679485535929,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0.11981512450592,0,0.508280908292259,1.3481157546434,0,0.502617408451458,0.347648640384553,0,0.20778804455956,0.811206315338788,0.203678727700633,0.622034853050465,0,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0,0.431135985865684,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0,0,1.79130840136644,0,0,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0,0.162137619091711,0,0.658650345873152,0,0.420579897128254,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.610953983535943,0,0.210407459670956,0.442655759869801,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,0,0.179397413521912,0,0,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0.780534591431195,0,0.221464689648775,0.637819074629948,0.163863314715738,0.518054945597687,0.867894351489069,0,0.54390568381871,0.491764273019036,0.827810238914197,0.481651769963376,0.937693492737625,0.327869890753351,0,0,0,0,0.477937595905104,0,0,0,0,0,0,2.12910127812403,0.35613120733451,0.977321756121456,0.329940245945071,0,0.485561272309963,0.302323556964751,1.13163047853539,0.295301892880773,0.614870295887855,0.516856586336442,0,0,1.26414703174326,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0.356737635204141,0.164549020602121,0.304464949114599,0.23467170806371,0.63549621259146,0,0.8244312647074,0.645857706783622,0.904693873922338,0.358117032009409,0.492422699235184,0.582961673259701,0,0,0,0.370389054739423,0,0.136694227721025,0.228778173206523,0.339956859987711,0.559805809294632,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0.87345025498471,0.269728692769641,0.247960367176008,0,1.03691978633434,1.24267862617385,0.56369293868419,1.34564891439581,1.32366792365678,0.972255941720238,2.58319646955462,2.02747350588934,4.5769323071844,2.3436789271911,3.35549902162275,1.20792060413003,0.288030006257865,0,0,0,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,2.89784391048286,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0.900642406448441,0,0,0.103787347584177,0,0,0.243106717068294,0,0.367687016900028,0.666740183404846,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0.377252682772152,0.561849044819294,0.320125762024346,0.516919220600519,0.952587382566147,0.463537303779422,0.38581844092741,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.282328141245992,0.507687647350059,0.914639864363863,0,0.950628796921032,0,0.355905054372522,0.788035859004508,1.22769312950907,0.309873682371932,0.192906610981141,0,0.701794825336225,0.214871054048298,0.382576664137687,0.220591419119515,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.866554859253824,0,0.204169356262369,0,0,0.523523743973798,0,0,0,1.76255545165808,1.01376931219515,2.20256102594018,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0,0,0.441737081903227,0,0.0958454710182364,0,0,0.255374676170375,0.46081959976873,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.45839474333043,0,0.142371680799103,0,0,0.151143120213571,0.289864488701678,0.860423876981386,0,0,0,0,0.140444420131752,1.1930122580464,2.59786004602869,1.06001872353102,0.14084341977668,1.28326477414318,0,0,0,0,0,0,0,0.445326417194474,0.520455980298408,0,0.230615497256059,0.301445281105245,0.705532242814229,0.628332956648377,0.247194967734374,1.15679485535929,0,0.161766849947409,0.220841518460394,0.484875253135222,0,0.292780797011547,0,0,0.11981512450592,0,0.508280908292259,1.3481157546434,0,0.502617408451458,0.347648640384553,0,0.20778804455956,0.811206315338788,0.203678727700633,0.622034853050465,0,0.210441855886474,0.130120442962704,0.459804208866946,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.0937017245597288,0,0.431135985865684,0.378212160335639,0.351902248327898,0.219195732427575,0.278047249225598,0,0,1.79130840136644,0,0,0.568326998791185,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0,0.162137619091711,0,0.658650345873152,0,0.420579897128254,0.102904612379284,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0.397912944082302,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.114248512609729,0,0.610953983535943,0,0.210407459670956,0.442655759869801,0.147610147979602,0,0.246794327843601,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0.486405680325106,0.549122826376163,1.43768206527355,0.744281895337007,0.936113019343682,0,0.179397413521912,0,0,0,0,0.339490171550376,0.469380496577004,0.167506257441816,0.476087281772027,0.780534591431195,0,0.221464689648775,0.637819074629948,0.163863314715738,0.518054945597687,0.867894351489069,0,0.54390568381871,0.491764273019036,0.827810238914197,0.481651769963376,0.937693492737625,0.327869890753351,0,0,0,0,0.477937595905104,0,0,0,0,0,0,2.12910127812403,0.35613120733451,0.977321756121456,0.329940245945071,0,0.485561272309963,0.302323556964751,1.13163047853539,0.295301892880773,0.614870295887855,0.516856586336442,0,0,1.26414703174326,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0,0.356737635204141,0.164549020602121,0.304464949114599,0.23467170806371,0.63549621259146,0,0.8244312647074,0.645857706783622,0.904693873922338,0.358117032009409,0.492422699235184,0.582961673259701,0,0,0,0.370389054739423,0,0.136694227721025,0.228778173206523,0.339956859987711,0.559805809294632,0,0,0.158167996790568,0.203319467126849,0.324016022465404,0.418176592028937,0.87345025498471,0.269728692769641,0.247960367176008,0,1.03691978633434,1.24267862617385,0.56369293868419,1.34564891439581,1.32366792365678,0.972255941720238,2.58319646955462,2.02747350588934,4.5769323071844,2.3436789271911,3.35549902162275,1.20792060413003,0.288030006257865,0,0,0,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,2.89784391048286,0,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0.900642406448441,0,0,0.103787347584177,0,0,0.243106717068294,0,0.367687016900028,0.666740183404846,0.412070114477788,0.64183841918363,0.505394423527595,0.25347929989024,0.377252682772152,0.561849044819294,0.320125762024346,0.516919220600519,0.952587382566147,0.463537303779422,0.38581844092741,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.581385666529314,0.282328141245992,0.507687647350059,0.914639864363863,0,0.950628796921032,0,0.355905054372522,0.788035859004508,1.22769312950907,0.309873682371932,0.192906610981141,0,0.701794825336225,0.214871054048298,0.382576664137687,0.220591419119515,0 | ||
|short_description=p5@Ctps2 | |||
}} | }} |
Latest revision as of 17:59, 1 October 2015
Short description: | p5@Ctps2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ctps2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000101095, ENSMUST00000123089, ENSMUST00000148949_5end |
EntrezGene: | Ctps2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 6.14e-11 | 3 |
vascular associated smooth muscle cell | 6.14e-11 | 3 |
aortic smooth muscle cell | 6.14e-11 | 3 |
smooth muscle myoblast | 6.14e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
gonad | 1.60e-18 | 18 |
gonad primordium | 1.60e-18 | 18 |
external genitalia | 6.12e-16 | 17 |
indifferent external genitalia | 6.12e-16 | 17 |
indifferent gonad | 6.12e-16 | 17 |
testis | 1.61e-15 | 14 |
anatomical cavity | 2.74e-15 | 39 |
male reproductive organ | 2.10e-14 | 15 |
body cavity | 5.91e-14 | 37 |
body cavity or lining | 5.91e-14 | 37 |
aorta | 8.72e-14 | 4 |
artery | 8.72e-14 | 4 |
systemic artery | 8.72e-14 | 4 |
arterial blood vessel | 8.72e-14 | 4 |
systemic arterial system | 8.72e-14 | 4 |
aortic system | 8.72e-14 | 4 |
arterial system | 8.72e-14 | 4 |
body cavity precursor | 1.60e-13 | 38 |
reproductive organ | 1.90e-13 | 24 |
male organism | 1.99e-13 | 16 |
male reproductive system | 1.99e-13 | 16 |
reproductive structure | 2.83e-12 | 26 |
reproductive system | 2.83e-12 | 26 |
vessel | 4.66e-11 | 5 |
epithelial tube open at both ends | 4.66e-11 | 5 |
blood vessel | 4.66e-11 | 5 |
vasculature | 4.66e-11 | 5 |
vascular system | 4.66e-11 | 5 |
blood vasculature | 4.66e-11 | 5 |
vascular cord | 4.66e-11 | 5 |
smooth muscle tissue | 6.14e-11 | 3 |
blood vessel smooth muscle | 6.14e-11 | 3 |
arterial system smooth muscle | 6.14e-11 | 3 |
artery smooth muscle tissue | 6.14e-11 | 3 |
aorta smooth muscle tissue | 6.14e-11 | 3 |