Personal tools

FFCP PHASE1:Mm9::chr16:3976541..3976567,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268857
|EntrezGene=268857
|HGNC=
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=Q5DU56
|UniProt=Q5DU56
|association_with_transcript=0bp_to_ENSMUST00000163478_5end
|association_with_transcript=0bp_to_ENSMUST00000163478_5end
|cluster_id=chr16:3976541..3976567,-
|description=CAGE_peak_1_at_Nlrc3_5end
|description=CAGE_peak_1_at_Nlrc3_5end
|id=chr16:3976541..3976567,-
|id=chr16:3976541..3976567,-
|ontology_enrichment_celltype=CL:0000838!6.85e-08!12;CL:0000542!1.01e-07!13;CL:0000051!1.01e-07!13;CL:0000084!2.66e-07!11;CL:0000827!2.66e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000838,2.30e-16,12;CL:0000542,6.15e-15,13;CL:0000051,6.15e-15,13;CL:0000084,9.65e-15,11;CL:0000827,9.65e-15,11;CL:0002031,8.22e-14,25;CL:0000988,1.43e-11,32;CL:0002032,1.43e-11,32;CL:0000037,1.43e-11,32;CL:0000837,1.43e-11,32;CL:0000791,1.88e-11,9;CL:0000789,1.88e-11,9;CL:0002420,1.88e-11,9;CL:0002419,1.88e-11,9;CL:0000790,1.88e-11,9;CL:0000738,6.47e-11,17;CL:0002087,6.47e-11,17;CL:0000624,1.86e-09,8;CL:0002320,5.32e-07,46;CL:0000134,5.32e-07,46
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!5.56e-13!29;UBERON:0001004!5.34e-12!42;UBERON:0000065!1.34e-11!41;UBERON:0002193!2.68e-11!48;UBERON:0003408!4.87e-11!24;UBERON:0002370!1.21e-10!23;UBERON:0000974!1.21e-10!23;UBERON:0004807!1.21e-10!23;UBERON:0005058!1.21e-10!23;UBERON:0003351!1.21e-10!23;UBERON:0009113!1.21e-10!23;UBERON:0003295!1.21e-10!23;UBERON:0009722!1.21e-10!23;UBERON:0005562!1.21e-10!23;UBERON:0007690!1.21e-10!23;UBERON:0002390!4.86e-10!45;UBERON:0003061!4.86e-10!45;UBERON:0006562!8.98e-10!24;UBERON:0001557!8.98e-10!24;UBERON:0001042!8.98e-10!24;UBERON:0008814!8.98e-10!24;UBERON:0009145!8.98e-10!24;UBERON:0000072!1.31e-07!27;UBERON:0003081!1.45e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.43e-29,29;UBERON:0005057,4.43e-29,29;UBERON:0002370,5.48e-28,23;UBERON:0000974,5.48e-28,23;UBERON:0004807,5.48e-28,23;UBERON:0005058,5.48e-28,23;UBERON:0003351,5.48e-28,23;UBERON:0009113,5.48e-28,23;UBERON:0003295,5.48e-28,23;UBERON:0009722,5.48e-28,23;UBERON:0005562,5.48e-28,23;UBERON:0007690,5.48e-28,23;UBERON:0006562,1.27e-26,24;UBERON:0003408,1.27e-26,24;UBERON:0001557,1.27e-26,24;UBERON:0001042,1.27e-26,24;UBERON:0008814,1.27e-26,24;UBERON:0009145,1.27e-26,24;UBERON:0000077,1.92e-25,35;UBERON:0002193,4.18e-25,48;UBERON:0002405,4.18e-25,48;UBERON:0002390,6.84e-25,45;UBERON:0003061,6.84e-25,45;UBERON:0000072,3.94e-23,27;UBERON:0000065,7.55e-17,41;UBERON:0001004,2.52e-16,42;UBERON:0007811,3.64e-16,36;UBERON:0003081,5.06e-13,87;UBERON:0000153,8.83e-13,43;UBERON:0003929,5.18e-09,55;UBERON:0001041,7.16e-09,80;UBERON:0005911,5.36e-08,69;UBERON:0002368,6.71e-08,60;UBERON:0000926,1.36e-07,120;UBERON:0004120,1.36e-07,120;UBERON:0006603,1.36e-07,120;UBERON:0000949,1.75e-07,72;UBERON:0002384,5.32e-07,46;UBERON:0002530,5.77e-07,65;UBERON:0000490,8.52e-07,66
|phase1_expression=0,0,0,0,0,0,0,11.2337291394171,1.83025338797167,1.87251621057595,0.171217968225505,0.398860794976682,11.9840510951844,15.8230928378385,0.666219523631325,1.82227740650843,0,5.0473946457318,6.58149281307546,4.2438965179803,0.425216450755349,3.3758923408301,1.82839852397255,0.639969691173627,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,9.42970784614748,17.8129713545506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,4.91981978929626,0.445326417194474,0.520455980298408,0,0.461230994512117,0.452167921657868,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.883366073841574,2.42437626567611,0,0,0,0.510914110417183,1.1981512450592,0,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0.203678727700633,0.622034853050465,0,0,0,0.459804208866946,0.180062129805349,0,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0,0.378212160335639,0,0,0.278047249225598,0.348252166522167,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0.23674473558521,0,0.462801338662135,0,0.268273401399619,0.700592054203017,0.329119699826961,1.47750717671186,0.243206428637567,0.438599962275997,0.878200461164203,0.268412837520744,0,0.102904612379284,0.991256348951394,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0.432276099749388,0,0.189667900953082,0.685491075658373,0,0.203651327845314,0,0.561086559122548,0.822074982615345,0.295220295959204,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0,0.202860121388503,0,0.50925170356284,0,0.486405680325106,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0.37898282354097,0.488894929326078,1.01847051465113,1.17345124144251,0.335012514883631,0,0.390267295715598,0.945810864637146,0.44292937929755,0.478364305972461,0.655453258862952,0.690739927463582,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0,0.214337035031592,0.886701168211368,0.178368817602071,0.658196082408484,0,1.40803024838226,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,2.9048049735635,0.412773735926445,0.185194527369712,0.753473828018764,1.0935538217682,2.97411625168479,2.20971958992012,3.21888340344413,2.3493995546752,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0.388844919875379,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0,0,10.7443781013581,1.01362607645082,2.36235201479103,5.1968329191118,4.65469408735452,7.54989148168807,12.9811085481566,9.45212973917294,13.3275713931555,17.756185950615,16.5354943624418,16.8602133679772,19.3385801697062,23.6091342406769,0,0.221985953374065,1.34570784914214,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0,0,0.367687016900028,0,0.412070114477788,0.320919209591815,0,0,0,0.468207537349412,0.192075457214608,0.287177344778066,0.476293691283074,0,0.38581844092741,0.412085900803307,0.588795680537589,0,0.532427418478012,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.492522411877817,0,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,11.2337291394171,1.83025338797167,1.87251621057595,0.171217968225505,0.398860794976682,11.9840510951844,15.8230928378385,0.666219523631325,1.82227740650843,0,5.0473946457318,6.58149281307546,4.2438965179803,0.425216450755349,3.3758923408301,1.82839852397255,0.639969691173627,0.45881856213434,0,0,0,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,9.42970784614748,17.8129713545506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,4.91981978929626,0.445326417194474,0.520455980298408,0,0.461230994512117,0.452167921657868,0.352766121407114,0.125666591329675,0,0.144599356919912,0,0.161766849947409,0.883366073841574,2.42437626567611,0,0,0,0.510914110417183,1.1981512450592,0,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0.203678727700633,0.622034853050465,0,0,0,0.459804208866946,0.180062129805349,0,0.204109497453984,0.2562274405697,0.0937017245597288,0.258703370739016,0,0.378212160335639,0,0,0.278047249225598,0.348252166522167,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0.23674473558521,0,0.462801338662135,0,0.268273401399619,0.700592054203017,0.329119699826961,1.47750717671186,0.243206428637567,0.438599962275997,0.878200461164203,0.268412837520744,0,0.102904612379284,0.991256348951394,0,0.213288250535234,0.464473343720877,0,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0.58489226135736,0,0.432276099749388,0,0.189667900953082,0.685491075658373,0,0.203651327845314,0,0.561086559122548,0.822074982615345,0.295220295959204,0.470996183524124,0.370191491765402,0,0.166845105716094,0,0,0.202860121388503,0,0.50925170356284,0,0.486405680325106,0,0,0,0,0,0.179397413521912,0,0.739012760666419,0.37898282354097,0.488894929326078,1.01847051465113,1.17345124144251,0.335012514883631,0,0.390267295715598,0.945810864637146,0.44292937929755,0.478364305972461,0.655453258862952,0.690739927463582,0.723245292907558,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0,0.329940245945071,1.32745138339963,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0,0.214337035031592,0.886701168211368,0.178368817602071,0.658196082408484,0,1.40803024838226,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0,2.9048049735635,0.412773735926445,0.185194527369712,0.753473828018764,1.0935538217682,2.97411625168479,2.20971958992012,3.21888340344413,2.3493995546752,0,0.316335993581135,0.406638934253697,0.108005340821801,0,0.218362563746178,0,0.165306911450672,0,0.388844919875379,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0.258319646955462,0,0.117357238645754,0.13020438484395,0,0,0,10.7443781013581,1.01362607645082,2.36235201479103,5.1968329191118,4.65469408735452,7.54989148168807,12.9811085481566,9.45212973917294,13.3275713931555,17.756185950615,16.5354943624418,16.8602133679772,19.3385801697062,23.6091342406769,0,0.221985953374065,1.34570784914214,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0,0,0.367687016900028,0,0.412070114477788,0.320919209591815,0,0,0,0.468207537349412,0.192075457214608,0.287177344778066,0.476293691283074,0,0.38581844092741,0.412085900803307,0.588795680537589,0,0.532427418478012,0.238436189947321,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.492522411877817,0,0.309873682371932,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843
|short_description=p1@Nlrc3
|short_description=p1@Nlrc3
}}
}}

Latest revision as of 00:21, 2 October 2015

Short description:p1@Nlrc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nlrc3_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 0bp_to_ENSMUST00000163478_5end
EntrezGene:Nlrc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nlrc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.98
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.82
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.58
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.83
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.81
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H94.92
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.20
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B510.74
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C55.20
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G47.55
thymus, neonate N02.CNhs11181.1541-43F812.98
thymus, neonate N03.CNhs11137.2104-43C79.45
thymus, neonate N06.CNhs11197.681-26C413.33
thymus, neonate N07.CNhs11211.713-19D317.76
thymus, neonate N10.CNhs11194.748-24E416.54
thymus, neonate N20.CNhs11186.820-7A216.86
thymus, neonate N25.CNhs11125.1362-25G719.34
thymus, neonate N30.CNhs11132.1393-42G223.61
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ4.43e-2929
immune organ4.43e-2929
thymus5.48e-2823
neck5.48e-2823
respiratory system epithelium5.48e-2823
hemolymphoid system gland5.48e-2823
pharyngeal epithelium5.48e-2823
thymic region5.48e-2823
pharyngeal gland5.48e-2823
entire pharyngeal arch endoderm5.48e-2823
thymus primordium5.48e-2823
early pharyngeal endoderm5.48e-2823
pharynx1.27e-2624
gland of gut1.27e-2624
upper respiratory tract1.27e-2624
chordate pharynx1.27e-2624
pharyngeal arch system1.27e-2624
pharyngeal region of foregut1.27e-2624
mixed endoderm/mesoderm-derived structure1.92e-2535
hemolymphoid system4.18e-2548
immune system4.18e-2548
hematopoietic system6.84e-2545
blood island6.84e-2545
segment of respiratory tract3.94e-2327
respiratory tract7.55e-1741
respiratory system2.52e-1642
craniocervical region3.64e-1636
lateral plate mesoderm5.06e-1387
anterior region of body8.83e-1343
gut epithelium5.18e-0955
foregut7.16e-0980
endo-epithelium5.36e-0869
endocrine gland6.71e-0860
mesoderm1.36e-07120
mesoderm-derived structure1.36e-07120
presumptive mesoderm1.36e-07120
endocrine system1.75e-0772
connective tissue5.32e-0746
gland5.77e-0765
unilaminar epithelium8.52e-0766
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:3976541..3976567,-&oldid=4330034"